RNA–Protein interactions for RNA: ENST00000607049.5

PKNOX1-210, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 762 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-210ENST00000607049 NISCHQ9Y2I1 1504 aa35.11■■■■□ 3.21
PKNOX1-210ENST00000607049 CCDC180Q9P1Z9 1646 aa31.31■■■□□ 2.6
PKNOX1-210ENST00000607049 ABCC9O60706 1549 aa30.95■■■□□ 2.55
PKNOX1-210ENST00000607049 RB1CC1Q8TDY2 1594 aa29.69■■■□□ 2.34
PKNOX1-210ENST00000607049 DCAF8L2P0C7V8 631 aa29.64■■■□□ 2.34
PKNOX1-210ENST00000607049 NACADO15069 1562 aa29.57■■■□□ 2.32
PKNOX1-210ENST00000607049 MYO15BQ96JP2 1530 aa29.3■■■□□ 2.28
PKNOX1-210ENST00000607049 ZCCHC6Q5VYS8 1495 aaKnown RBP29.17■■■□□ 2.26
PKNOX1-210ENST00000607049 DCAF1Q9Y4B6 1507 aa29.05■■■□□ 2.24
PKNOX1-210ENST00000607049 PABPN1Q86U42 306 aaKnown RBP eCLIP28.92■■■□□ 2.22
PKNOX1-210ENST00000607049 UNC13AQ9UPW8 1703 aa28.79■■■□□ 2.2
PKNOX1-210ENST00000607049 BICRAQ9NZM4 1560 aa28.65■■■□□ 2.18
PKNOX1-210ENST00000607049 DNAJC5BQ9UF47 199 aa28.6■■■□□ 2.17
PKNOX1-210ENST00000607049 SCRIBQ14160 1630 aa28.55■■■□□ 2.16
PKNOX1-210ENST00000607049 SHROOM4Q9ULL8 1493 aa28.49■■■□□ 2.15
PKNOX1-210ENST00000607049 EIF4G1Q04637 1599 aaKnown RBP28■■■□□ 2.07
PKNOX1-210ENST00000607049 CC2D2AQ9P2K1 1620 aa27.94■■■□□ 2.06
PKNOX1-210ENST00000607049 CECR2Q9BXF3 1484 aa27.88■■■□□ 2.05
PKNOX1-210ENST00000607049 NCAPD3P42695 1498 aa27.29■■□□□ 1.96
PKNOX1-210ENST00000607049 BAZ1AQ9NRL2 1556 aaPredicted RBP27.28■■□□□ 1.96
PKNOX1-210ENST00000607049 SMARCA4P51532 1647 aa27.27■■□□□ 1.96
PKNOX1-210ENST00000607049 SMARCA2P51531 1590 aa27.24■■□□□ 1.95
PKNOX1-210ENST00000607049 ATAD2BQ9ULI0 1458 aa27.24■■□□□ 1.95
PKNOX1-210ENST00000607049 HMGXB3Q12766 1538 aa27.1■■□□□ 1.93
PKNOX1-210ENST00000607049 BAZ1BQ9UIG0 1483 aaKnown RBP27.05■■□□□ 1.92
PKNOX1-210ENST00000607049 MROH2BQ7Z745 1585 aa27.01■■□□□ 1.92
PKNOX1-210ENST00000607049 PEG3Q9GZU2 1588 aa27.01■■□□□ 1.91
PKNOX1-210ENST00000607049 ERCC6Q03468 1493 aa26.81■■□□□ 1.88
PKNOX1-210ENST00000607049 WIZO95785 1651 aa26.69■■□□□ 1.86
PKNOX1-210ENST00000607049 RSF1Q96T23 1441 aaPredicted RBP26.65■■□□□ 1.86
PKNOX1-210ENST00000607049 NESP48681 1621 aa26.65■■□□□ 1.86
PKNOX1-210ENST00000607049 LAMC3Q9Y6N6 1575 aa26.61■■□□□ 1.85
PKNOX1-210ENST00000607049 CUX2O14529 1486 aa26.56■■□□□ 1.84
PKNOX1-210ENST00000607049 PDS5BQ9NTI5 1447 aa26.53■■□□□ 1.84
PKNOX1-210ENST00000607049 CADPSQ9ULU8 1353 aa26.51■■□□□ 1.83
PKNOX1-210ENST00000607049 TOP2AP11388 1531 aaKnown RBP26.45■■□□□ 1.83
PKNOX1-210ENST00000607049 KIF21AQ7Z4S6 1674 aa26.28■■□□□ 1.8
PKNOX1-210ENST00000607049 THOC2Q8NI27 1593 aaKnown RBP26.27■■□□□ 1.8
PKNOX1-210ENST00000607049 CFTRP13569 1480 aa26.25■■□□□ 1.79
PKNOX1-210ENST00000607049 MRC2Q9UBG0 1479 aa26.2■■□□□ 1.78
PKNOX1-210ENST00000607049 CEP164Q9UPV0 1460 aa26.2■■□□□ 1.78
PKNOX1-210ENST00000607049 FANCD2Q9BXW9 1451 aa26.18■■□□□ 1.78
PKNOX1-210ENST00000607049 CCDC88BA6NC98 1476 aa26.15■■□□□ 1.78
PKNOX1-210ENST00000607049 DNAJC5Q9H3Z4 198 aa26.1■■□□□ 1.77
PKNOX1-210ENST00000607049 WDR62O43379 1518 aa26.07■■□□□ 1.76
PKNOX1-210ENST00000607049 PRDM2Q13029 1718 aa25.91■■□□□ 1.74
PKNOX1-210ENST00000607049 SUPT5HO00267 1087 aaKnown RBP25.89■■□□□ 1.74
PKNOX1-210ENST00000607049 URB2Q14146 1524 aaKnown RBP25.87■■□□□ 1.73
PKNOX1-210ENST00000607049 ABCC8Q09428 1581 aa25.79■■□□□ 1.72
PKNOX1-210ENST00000607049 TOPBP1Q92547 1522 aa25.7■■□□□ 1.7
PKNOX1-210ENST00000607049 IFT140Q96RY7 1462 aa25.67■■□□□ 1.7
PKNOX1-210ENST00000607049 DNMBPQ6XZF7 1577 aa25.65■■□□□ 1.7
PKNOX1-210ENST00000607049 OSCARQ8IYS5 282 aa25.5■■□□□ 1.67
PKNOX1-210ENST00000607049 ZNF608Q9ULD9 1512 aaPredicted RBP25.48■■□□□ 1.67
PKNOX1-210ENST00000607049 POLA1P09884 1462 aaPredicted RBP25.47■■□□□ 1.67
PKNOX1-210ENST00000607049 SOGA1O94964 1423 aa25.43■■□□□ 1.66
PKNOX1-210ENST00000607049 TARBP1Q13395 1621 aaKnown RBP25.37■■□□□ 1.65
PKNOX1-210ENST00000607049 FGD5Q6ZNL6 1462 aa25.37■■□□□ 1.65
PKNOX1-210ENST00000607049 CUX1P39880 1505 aa25.37■■□□□ 1.65
PKNOX1-210ENST00000607049 EIF4G3O43432 1585 aaKnown RBP25.36■■□□□ 1.65
PKNOX1-210ENST00000607049 AQRO60306 1485 aaKnown RBP eCLIP25.35■■□□□ 1.65
PKNOX1-210ENST00000607049 RAD54L2Q9Y4B4 1467 aa25.34■■□□□ 1.65
PKNOX1-210ENST00000607049 TDRD9Q8NDG6 1382 aaKnown RBP25.3■■□□□ 1.64
PKNOX1-210ENST00000607049 WDR97A6NE52 1622 aa25.26■■□□□ 1.63
PKNOX1-210ENST00000607049 FBLN2P98095 1184 aa25.25■■□□□ 1.63
PKNOX1-210ENST00000607049 WRNQ14191 1432 aaPredicted RBP eCLIP25.2■■□□□ 1.62
PKNOX1-210ENST00000607049 TRIM41Q8WV44 630 aa25.17■■□□□ 1.62
PKNOX1-210ENST00000607049 GRIN2BQ13224 1484 aa25.15■■□□□ 1.62
PKNOX1-210ENST00000607049 CHMP7Q8WUX9 453 aaPredicted RBP25.13■■□□□ 1.61
PKNOX1-210ENST00000607049 ABCA10Q8WWZ4 1543 aa25.12■■□□□ 1.61
PKNOX1-210ENST00000607049 GAPVD1Q14C86 1478 aa25.11■■□□□ 1.61
PKNOX1-210ENST00000607049 SNAPC4Q5SXM2 1469 aa25.11■■□□□ 1.61
PKNOX1-210ENST00000607049 MAGI1Q96QZ7 1491 aaPredicted RBP25.11■■□□□ 1.61
PKNOX1-210ENST00000607049 TOP2BQ02880 1626 aa25.1■■□□□ 1.61
PKNOX1-210ENST00000607049 BIVM-ERCC5R4GMW8 1640 aa25.06■■□□□ 1.6
PKNOX1-210ENST00000607049 CHD1O14646 1710 aa25.06■■□□□ 1.6
PKNOX1-210ENST00000607049 SYNJ1O43426 1573 aa25.03■■□□□ 1.6
PKNOX1-210ENST00000607049 SYNJ2O15056 1496 aa25.02■■□□□ 1.6
PKNOX1-210ENST00000607049 ABCA5Q8WWZ7 1642 aa24.97■■□□□ 1.59
PKNOX1-210ENST00000607049 ARHGEF11O15085 1522 aa24.96■■□□□ 1.59
PKNOX1-210ENST00000607049 PBRM1Q86U86 1689 aa24.95■■□□□ 1.58
PKNOX1-210ENST00000607049 RIMBP3CA6NJZ7 1639 aa24.94■■□□□ 1.58
PKNOX1-210ENST00000607049 RIMBP3BA6NNM3 1639 aa24.94■■□□□ 1.58
PKNOX1-210ENST00000607049 RIMBP3Q9UFD9 1639 aa24.94■■□□□ 1.58
PKNOX1-210ENST00000607049 CYB5RLQ6IPT4 315 aa24.85■■□□□ 1.57
PKNOX1-210ENST00000607049 ERICH3Q5RHP9 1530 aa24.83■■□□□ 1.57
PKNOX1-210ENST00000607049 FHAD1B1AJZ9 1412 aa24.83■■□□□ 1.57
PKNOX1-210ENST00000607049 CLASP1Q7Z460 1538 aa24.81■■□□□ 1.56
PKNOX1-210ENST00000607049 GRIN2AQ12879 1464 aa24.79■■□□□ 1.56
PKNOX1-210ENST00000607049 ADAMTS12P58397 1594 aa24.78■■□□□ 1.56
PKNOX1-210ENST00000607049 KIF27Q86VH2 1401 aa24.74■■□□□ 1.55
PKNOX1-210ENST00000607049 ARAP1Q96P48 1450 aa24.71■■□□□ 1.55
PKNOX1-210ENST00000607049 NUP160Q12769 1436 aa24.68■■□□□ 1.54
PKNOX1-210ENST00000607049 IGF1RP08069 1367 aa24.61■■□□□ 1.53
PKNOX1-210ENST00000607049 CEP170Q5SW79 1584 aa24.61■■□□□ 1.53
PKNOX1-210ENST00000607049 CUL7Q14999 1698 aa24.53■■□□□ 1.52
PKNOX1-210ENST00000607049 JPH4Q96JJ6 628 aa24.52■■□□□ 1.52
PKNOX1-210ENST00000607049 TRHP20396 242 aaPredicted RBP24.51■■□□□ 1.51
PKNOX1-210ENST00000607049 CARMIL1Q5VZK9 1371 aa24.5■■□□□ 1.51
PKNOX1-210ENST00000607049 PRG4Q92954 1404 aaPredicted RBP24.46■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms