Protein–RNA interactions for Protein: Q7KZF4

SND1, Staphylococcal nuclease domain-containing protein 1, humanhuman

Known RBP eCLIP

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1Q7KZF4 DIABLO-202ENST00000342392 1336 ntTSL 1 (best)13.96□□□□□ -0.178e-8■■■□□ 16.8
SND1Q7KZF4 AC048338.1-201ENST00000535844 2748 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.438e-8■■■□□ 16.8
SND1Q7KZF4 YARS-204ENST00000470377 782 ntTSL 38.04□□□□□ -1.128e-13■■■□□ 16.8
SND1Q7KZF4 TMEM39A-204ENST00000468545 575 ntTSL 45.54□□□□□ -1.528e-8■■■□□ 16.8
SND1Q7KZF4 TM9SF4-201ENST00000217315 4032 ntTSL 2 BASIC13.67□□□□□ -0.225e-10■■■□□ 16.8
SND1Q7KZF4 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.165e-10■■■□□ 16.8
SND1Q7KZF4 MS4A3-204ENST00000525686 746 ntTSL 312.11□□□□□ -0.479e-8■■■□□ 16.8
SND1Q7KZF4 MS4A3-201ENST00000278865 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.659e-8■■■□□ 16.8
SND1Q7KZF4 MS4A3-202ENST00000358152 1516 ntTSL 5 BASIC10.95□□□□□ -0.669e-8■■■□□ 16.8
SND1Q7KZF4 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC8.44□□□□□ -1.069e-8■■■□□ 16.8
SND1Q7KZF4 MS4A3-203ENST00000395032 867 ntTSL 2 BASIC8.2□□□□□ -1.19e-8■■■□□ 16.8
SND1Q7KZF4 APP-215ENST00000474136 1309 ntTSL 1 (best)20.86■□□□□ 0.931e-9■■■□□ 16.8
SND1Q7KZF4 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.895e-13■■■□□ 16.8
SND1Q7KZF4 PRDX1-202ENST00000319248 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.25e-13■■■□□ 16.8
SND1Q7KZF4 PRDX1-203ENST00000372079 609 ntTSL 3 BASIC12.11□□□□□ -0.475e-13■■■□□ 16.8
SND1Q7KZF4 HSPG2-203ENST00000374695 14327 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.945e-7■■■□□ 16.8
SND1Q7KZF4 COPB1-209ENST00000533096 547 ntTSL 413.52□□□□□ -0.253e-6■■■□□ 16.8
SND1Q7KZF4 COPB1-207ENST00000529866 729 ntTSL 210.84□□□□□ -0.673e-6■■■□□ 16.8
SND1Q7KZF4 COPB1-212ENST00000534771 576 ntTSL 41.63□□□□□ -2.153e-6■■■□□ 16.8
SND1Q7KZF4 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.274e-8■■■□□ 16.8
SND1Q7KZF4 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC15.37■□□□□ 0.054e-8■■■□□ 16.8
SND1Q7KZF4 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC15.31■□□□□ 0.044e-8■■■□□ 16.8
SND1Q7KZF4 SLC13A5-201ENST00000293800 3176 ntTSL 2 BASIC12.37□□□□□ -0.434e-8■■■□□ 16.8
SND1Q7KZF4 MAN2B1-210ENST00000493218 554 ntTSL 214.14□□□□□ -0.152e-16■■■□□ 16.8
SND1Q7KZF4 MAN2B1-207ENST00000469423 574 ntTSL 212.83□□□□□ -0.362e-16■■■□□ 16.8
SND1Q7KZF4 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.421e-7■■■□□ 16.8
SND1Q7KZF4 TSPAN4-218ENST00000529566 706 ntTSL 216.66■□□□□ 0.266e-7■■■□□ 16.8
SND1Q7KZF4 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.236e-8■■■□□ 16.8
SND1Q7KZF4 TIMP2-205ENST00000592761 2433 ntTSL 1 (best)15.03■□□□□ -06e-8■■■□□ 16.8
SND1Q7KZF4 TIMP2-204ENST00000586057 3389 ntTSL 1 (best) BASIC11.37□□□□□ -0.596e-8■■■□□ 16.8
SND1Q7KZF4 TIMP2-203ENST00000585421 3345 ntTSL 3 BASIC10.48□□□□□ -0.736e-8■■■□□ 16.8
SND1Q7KZF4 TIMP2-202ENST00000536189 3415 ntTSL 2 BASIC10.1□□□□□ -0.796e-8■■■□□ 16.8
SND1Q7KZF4 SLC6A6-203ENST00000610642 1983 ntTSL 219.7■□□□□ 0.741e-7■■■□□ 16.8
SND1Q7KZF4 ALB-213ENST00000508932 369 ntTSL 33.27□□□□□ -1.891e-323■■■□□ 16.8
SND1Q7KZF4 CD164-205ENST00000415861 4963 ntTSL 1 (best)6.16□□□□□ -1.422e-14■■■□□ 16.8
SND1Q7KZF4 CD9-206ENST00000536586 739 ntTSL 314.13□□□□□ -0.152e-7■■■□□ 16.8
SND1Q7KZF4 LAMC1-204ENST00000479499 700 ntTSL 312.29□□□□□ -0.442e-7■■■□□ 16.8
SND1Q7KZF4 SUN2-208ENST00000438058 1012 ntTSL 323.58■■□□□ 1.372e-9■■■□□ 16.8
SND1Q7KZF4 ST6GAL1-205ENST00000427315 544 ntTSL 421.02■□□□□ 0.969e-9■■■□□ 16.8
SND1Q7KZF4 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.339e-8■■■□□ 16.8
SND1Q7KZF4 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.149e-9■■■□□ 16.8
SND1Q7KZF4 SUN2-201ENST00000405018 4022 ntTSL 1 (best) BASIC15.21■□□□□ 0.029e-8■■■□□ 16.8
SND1Q7KZF4 SUN2-202ENST00000405510 4055 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.199e-8■■■□□ 16.8
SND1Q7KZF4 ST6GAL1-215ENST00000457772 3947 ntTSL 5 BASIC13.84□□□□□ -0.199e-9■■■□□ 16.8
SND1Q7KZF4 SUN2-206ENST00000430185 454 ntTSL 312.3□□□□□ -0.442e-9■■■□□ 16.8
SND1Q7KZF4 ST6GAL1-209ENST00000442023 570 ntTSL 49.91□□□□□ -0.829e-9■■■□□ 16.8
SND1Q7KZF4 ST6GAL1-213ENST00000448449 1055 ntTSL 59.15□□□□□ -0.949e-9■■■□□ 16.8
SND1Q7KZF4 ST6GAL1-220ENST00000470633 4893 ntTSL 28.09□□□□□ -1.119e-9■■■□□ 16.8
SND1Q7KZF4 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.179e-9■■■□□ 16.8
SND1Q7KZF4 PTPRC-214ENST00000530727 1962 ntTSL 1 (best)6.37□□□□□ -1.392e-7■■■□□ 16.8
SND1Q7KZF4 NPC1-202ENST00000540608 2790 ntTSL 213.63□□□□□ -0.232e-7■■■□□ 16.8
SND1Q7KZF4 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC16.15■□□□□ 0.187e-7■■■□□ 16.8
SND1Q7KZF4 SLC39A9-207ENST00000555840 2377 ntTSL 213.82□□□□□ -0.27e-7■■■□□ 16.8
SND1Q7KZF4 SLC39A9-201ENST00000031146 5192 ntTSL 5 BASIC12.29□□□□□ -0.447e-7■■■□□ 16.8
SND1Q7KZF4 SLC39A9-210ENST00000557046 855 ntTSL 1 (best) BASIC11.93□□□□□ -0.57e-7■■■□□ 16.8
SND1Q7KZF4 SLC39A9-203ENST00000538956 1264 ntTSL 211.93□□□□□ -0.57e-7■■■□□ 16.8
SND1Q7KZF4 SLC39A9-211ENST00000628474 3701 ntTSL 510.54□□□□□ -0.727e-7■■■□□ 16.8
SND1Q7KZF4 SLC39A9-202ENST00000336643 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.767e-7■■■□□ 16.8
SND1Q7KZF4 SLC39A9-206ENST00000555245 1531 ntTSL 28.03□□□□□ -1.127e-7■■■□□ 16.8
SND1Q7KZF4 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -01e-9■■■□□ 16.8
SND1Q7KZF4 SLC38A1-202ENST00000439706 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.171e-9■■■□□ 16.8
SND1Q7KZF4 SLC38A1-206ENST00000549049 3196 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.21e-9■■■□□ 16.8
SND1Q7KZF4 SLC38A1-201ENST00000398637 8066 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.361e-9■■■□□ 16.8
SND1Q7KZF4 SLC38A10-210ENST00000573058 1627 nt26.43■■□□□ 1.829e-12■■■□□ 16.8
SND1Q7KZF4 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.427e-9■■■□□ 16.7
SND1Q7KZF4 ALG1-206ENST00000591822 1689 ntTSL 1 (best)24.57■■□□□ 1.527e-8■■■□□ 16.7
SND1Q7KZF4 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.167e-8■■■□□ 16.7
SND1Q7KZF4 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC21.56■■□□□ 1.047e-8■■■□□ 16.7
SND1Q7KZF4 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC16.94■□□□□ 0.37e-8■■■□□ 16.7
SND1Q7KZF4 SREBF1-218ENST00000578469 588 ntTSL 317.69■□□□□ 0.428e-7■■■□□ 16.7
SND1Q7KZF4 NDUFB11-201ENST00000276062 948 ntTSL 1 (best) BASIC13.81□□□□□ -0.24e-7■■■□□ 16.7
SND1Q7KZF4 NDUFB11-202ENST00000377811 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.264e-7■■■□□ 16.7
SND1Q7KZF4 FCGR2A-206ENST00000467654 914 ntTSL 215.35■□□□□ 0.055e-7■■■□□ 16.7
SND1Q7KZF4 COL9A2-204ENST00000427563 548 ntTSL 319.7■□□□□ 0.744e-7■■■□□ 16.7
SND1Q7KZF4 OAT-202ENST00000467675 810 ntTSL 510.19□□□□□ -0.782e-7■■■□□ 16.7
SND1Q7KZF4 PHGDH-213ENST00000641272 758 nt17.21■□□□□ 0.351e-7■■■□□ 16.7
SND1Q7KZF4 PHGDH-215ENST00000641371 725 nt10.16□□□□□ -0.781e-7■■■□□ 16.7
SND1Q7KZF4 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.694e-8■■■□□ 16.7
SND1Q7KZF4 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC18.08■□□□□ 0.484e-8■■■□□ 16.7
SND1Q7KZF4 UXT-205ENST00000485641 627 ntTSL 316.6■□□□□ 0.254e-8■■■□□ 16.7
SND1Q7KZF4 SRPRB-204ENST00000484684 512 ntTSL 216.31■□□□□ 0.24e-8■■■□□ 16.7
SND1Q7KZF4 UXT-203ENST00000376964 894 ntTSL 216.05■□□□□ 0.164e-8■■■□□ 16.7
SND1Q7KZF4 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC15.28■□□□□ 0.044e-8■■■□□ 16.7
SND1Q7KZF4 FN1-217ENST00000471193 496 ntTSL 312.08□□□□□ -0.484e-8■■■□□ 16.7
SND1Q7KZF4 NIP7-203ENST00000562131 572 ntTSL 49.86□□□□□ -0.834e-8■■■□□ 16.7
SND1Q7KZF4 PIGU-205ENST00000480175 744 ntTSL 39.54□□□□□ -0.882e-6■■■□□ 16.7
SND1Q7KZF4 C2-204ENST00000413154 561 ntTSL 413.79□□□□□ -0.21e-11■■■□□ 16.7
SND1Q7KZF4 SLC20A1-209ENST00000498224 692 ntTSL 210.96□□□□□ -0.652e-7■■■□□ 16.7
SND1Q7KZF4 SLC20A1-206ENST00000480984 738 ntTSL 510.37□□□□□ -0.752e-7■■■□□ 16.7
SND1Q7KZF4 SLC20A1-205ENST00000456264 574 ntTSL 47.57□□□□□ -1.22e-7■■■□□ 16.7
SND1Q7KZF4 TXNDC12-203ENST00000471493 653 ntTSL 35.41□□□□□ -1.544e-7■■■□□ 16.7
SND1Q7KZF4 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.112e-6■■■□□ 16.7
SND1Q7KZF4 HACD2-202ENST00000469317 590 ntTSL 315.32■□□□□ 0.042e-6■■■□□ 16.7
SND1Q7KZF4 HACD2-204ENST00000480081 574 ntTSL 412.18□□□□□ -0.462e-6■■■□□ 16.7
SND1Q7KZF4 NCOA4-203ENST00000580070 1755 ntTSL 2 BASIC12.57□□□□□ -0.48e-7■■■□□ 16.7
SND1Q7KZF4 NCOA4-202ENST00000579039 2211 ntTSL 2 BASIC11.45□□□□□ -0.588e-7■■■□□ 16.7
SND1Q7KZF4 NCOA4-207ENST00000585132 3489 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.758e-7■■■□□ 16.7
SND1Q7KZF4 NCOA4-201ENST00000578454 2307 ntTSL 1 (best) BASIC9.6□□□□□ -0.878e-7■■■□□ 16.7
SND1Q7KZF4 NCOA4-204ENST00000581486 3549 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.038e-7■■■□□ 16.7
SND1Q7KZF4 NCOA4-205ENST00000583565 2371 ntAPPRIS P1 TSL 2 BASIC8.59□□□□□ -1.038e-7■■■□□ 16.7
Retrieved 100 of 13,567 protein–RNA pairs in 217.9 ms