RNA–Protein interactions for RNA: ENST00000535844.1

AC048338.1-201, humanhuman

APPRIS P1 TSL 2 BASIC

Gene AC048338.1, Length 2,748 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC048338.1-201ENST00000535844 NISCHQ9Y2I1 1504 aa22.55■■□□□ 1.2
AC048338.1-201ENST00000535844 SHROOM4Q9ULL8 1493 aa19.62■□□□□ 0.73
AC048338.1-201ENST00000535844 SUPT5HO00267 1087 aaKnown RBP19.3■□□□□ 0.68
AC048338.1-201ENST00000535844 ZCCHC6Q5VYS8 1495 aaKnown RBP19.09■□□□□ 0.65
AC048338.1-201ENST00000535844 CCDC180Q9P1Z9 1646 aa18.99■□□□□ 0.63
AC048338.1-201ENST00000535844 DCAF8L2P0C7V8 631 aa18.95■□□□□ 0.62
AC048338.1-201ENST00000535844 PELP1Q8IZL8 1130 aaKnown RBP18.87■□□□□ 0.61
AC048338.1-201ENST00000535844 MYO15BQ96JP2 1530 aa18.74■□□□□ 0.59
AC048338.1-201ENST00000535844 CHIC1Q5VXU3 224 aa18.71■□□□□ 0.59
AC048338.1-201ENST00000535844 MYT1Q01538 1121 aa18.47■□□□□ 0.55
AC048338.1-201ENST00000535844 PCGF6Q9BYE7 350 aa18.4■□□□□ 0.54
AC048338.1-201ENST00000535844 HRCP23327 699 aa18.39■□□□□ 0.53
AC048338.1-201ENST00000535844 DCAF1Q9Y4B6 1507 aa18.35■□□□□ 0.53
AC048338.1-201ENST00000535844 LOC105371045A0A1W2PR82 267 aa18.28■□□□□ 0.52
AC048338.1-201ENST00000535844 ABCC9O60706 1549 aa18.23■□□□□ 0.51
AC048338.1-201ENST00000535844 PPARGC1BQ86YN6 1023 aaKnown RBP18.16■□□□□ 0.5
AC048338.1-201ENST00000535844 SCRIBQ14160 1630 aa18.05■□□□□ 0.48
AC048338.1-201ENST00000535844 RSF1Q96T23 1441 aaPredicted RBP17.95■□□□□ 0.46
AC048338.1-201ENST00000535844 TRIM26Q12899 539 aaPredicted RBP17.87■□□□□ 0.45
AC048338.1-201ENST00000535844 FAM9AQ8IZU1 332 aaPredicted RBP17.87■□□□□ 0.45
AC048338.1-201ENST00000535844 TRIM41Q8WV44 630 aa17.86■□□□□ 0.45
AC048338.1-201ENST00000535844 RB1CC1Q8TDY2 1594 aa17.85■□□□□ 0.45
AC048338.1-201ENST00000535844 EHMT2Q96KQ7 1210 aa17.84■□□□□ 0.45
AC048338.1-201ENST00000535844 CECR2Q9BXF3 1484 aa17.69■□□□□ 0.42
AC048338.1-201ENST00000535844 TTBK1Q5TCY1 1321 aaPredicted RBP17.67■□□□□ 0.42
AC048338.1-201ENST00000535844 SCAF1Q9H7N4 1312 aaKnown RBP17.66■□□□□ 0.42
AC048338.1-201ENST00000535844 MROH2BQ7Z745 1585 aa17.61■□□□□ 0.41
AC048338.1-201ENST00000535844 NACADO15069 1562 aa17.55■□□□□ 0.4
AC048338.1-201ENST00000535844 WIZO95785 1651 aa17.54■□□□□ 0.4
AC048338.1-201ENST00000535844 ZEB1P37275 1124 aaPredicted RBP17.46■□□□□ 0.39
AC048338.1-201ENST00000535844 PABPN1Q86U42 306 aaKnown RBP eCLIP17.39■□□□□ 0.37
AC048338.1-201ENST00000535844 BAZ1AQ9NRL2 1556 aaPredicted RBP17.35■□□□□ 0.37
AC048338.1-201ENST00000535844 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.27■□□□□ 0.36
AC048338.1-201ENST00000535844 EIF4G1Q04637 1599 aaKnown RBP17.27■□□□□ 0.36
AC048338.1-201ENST00000535844 ABCC8Q09428 1581 aa17.26■□□□□ 0.35
AC048338.1-201ENST00000535844 CCDC88BA6NC98 1476 aa17.2■□□□□ 0.34
AC048338.1-201ENST00000535844 CCER1Q8TC90 406 aaPredicted RBP17.19■□□□□ 0.34
AC048338.1-201ENST00000535844 TOP2AP11388 1531 aaKnown RBP17.17■□□□□ 0.34
AC048338.1-201ENST00000535844 SMARCA4P51532 1647 aa17.15■□□□□ 0.34
AC048338.1-201ENST00000535844 UNC13AQ9UPW8 1703 aa17.14■□□□□ 0.33
AC048338.1-201ENST00000535844 SMARCA2P51531 1590 aa17.12■□□□□ 0.33
AC048338.1-201ENST00000535844 SOGA1O94964 1423 aa17.12■□□□□ 0.33
AC048338.1-201ENST00000535844 CEP162Q5TB80 1403 aa17.08■□□□□ 0.32
AC048338.1-201ENST00000535844 RUSC2Q8N2Y8 1516 aa17.04■□□□□ 0.32
AC048338.1-201ENST00000535844 ACIN1Q9UKV3 1341 aaKnown RBP17.03■□□□□ 0.32
AC048338.1-201ENST00000535844 PRKCSHP14314 528 aaPredicted RBP17.03■□□□□ 0.32
AC048338.1-201ENST00000535844 UBTFP17480 764 aaKnown RBP17.03■□□□□ 0.32
AC048338.1-201ENST00000535844 NEUROD1Q13562 356 aa17.02■□□□□ 0.32
AC048338.1-201ENST00000535844 BICRAQ9NZM4 1560 aa17■□□□□ 0.31
AC048338.1-201ENST00000535844 WRNQ14191 1432 aaPredicted RBP eCLIP16.98■□□□□ 0.31
AC048338.1-201ENST00000535844 CSRNP3Q8WYN3 585 aa16.98■□□□□ 0.31
AC048338.1-201ENST00000535844 GTF3C3Q9Y5Q9 886 aa16.97■□□□□ 0.31
AC048338.1-201ENST00000535844 TNIKQ9UKE5 1360 aa16.96■□□□□ 0.31
AC048338.1-201ENST00000535844 BCL11AQ9H165 835 aa16.95■□□□□ 0.3
AC048338.1-201ENST00000535844 DIEXFQ68CQ4 756 aaKnown RBP16.9■□□□□ 0.3
AC048338.1-201ENST00000535844 EEA1Q15075 1411 aa16.87■□□□□ 0.29
AC048338.1-201ENST00000535844 GOLGA3Q08378 1498 aa16.86■□□□□ 0.29
AC048338.1-201ENST00000535844 RANGAP1P46060 587 aaPredicted RBP16.82■□□□□ 0.28
AC048338.1-201ENST00000535844 SYNJ1O43426 1573 aa16.8■□□□□ 0.28
AC048338.1-201ENST00000535844 HNRNPUL2Q1KMD3 747 aaKnown RBP16.8■□□□□ 0.28
AC048338.1-201ENST00000535844 ERICH6Q7L0X2 663 aa16.76■□□□□ 0.27
AC048338.1-201ENST00000535844 CENPBP07199 599 aaPredicted RBP16.74■□□□□ 0.27
AC048338.1-201ENST00000535844 CEP164Q9UPV0 1460 aa16.73■□□□□ 0.27
AC048338.1-201ENST00000535844 CLIP1P30622 1438 aa16.72■□□□□ 0.27
AC048338.1-201ENST00000535844 PEG3Q9GZU2 1588 aa16.71■□□□□ 0.27
AC048338.1-201ENST00000535844 ZNF316A6NFI3 1004 aaPredicted RBP16.69■□□□□ 0.26
AC048338.1-201ENST00000535844 ATAD2BQ9ULI0 1458 aa16.68■□□□□ 0.26
AC048338.1-201ENST00000535844 BAZ1BQ9UIG0 1483 aaKnown RBP16.68■□□□□ 0.26
AC048338.1-201ENST00000535844 RAPGEF2Q9Y4G8 1499 aa16.67■□□□□ 0.26
AC048338.1-201ENST00000535844 KIF21BO75037 1637 aa16.67■□□□□ 0.26
AC048338.1-201ENST00000535844 YTHDC1Q96MU7 727 aaKnown RBP16.66■□□□□ 0.26
AC048338.1-201ENST00000535844 APLP2Q06481 763 aa16.63■□□□□ 0.25
AC048338.1-201ENST00000535844 VPS8Q8N3P4 1428 aa16.63■□□□□ 0.25
AC048338.1-201ENST00000535844 MIER1Q8N108 512 aa16.55■□□□□ 0.24
AC048338.1-201ENST00000535844 TOP2BQ02880 1626 aa16.5■□□□□ 0.23
AC048338.1-201ENST00000535844 SLC24A1O60721 1099 aa16.5■□□□□ 0.23
AC048338.1-201ENST00000535844 DNAJC5BQ9UF47 199 aa16.47■□□□□ 0.23
AC048338.1-201ENST00000535844 KANK4Q5T7N3 995 aaPredicted RBP16.44■□□□□ 0.22
AC048338.1-201ENST00000535844 BIVM-ERCC5R4GMW8 1640 aa16.41■□□□□ 0.22
AC048338.1-201ENST00000535844 ARAP1Q96P48 1450 aa16.41■□□□□ 0.22
AC048338.1-201ENST00000535844 PRXQ9BXM0 1461 aa16.39■□□□□ 0.21
AC048338.1-201ENST00000535844 ANP32EQ9BTT0 268 aa16.38■□□□□ 0.21
AC048338.1-201ENST00000535844 CUX1P39880 1505 aa16.37■□□□□ 0.21
AC048338.1-201ENST00000535844 ERICH3Q5RHP9 1530 aa16.36■□□□□ 0.21
AC048338.1-201ENST00000535844 DHX57Q6P158 1386 aaKnown RBP16.36■□□□□ 0.21
AC048338.1-201ENST00000535844 ITGAEP38570 1179 aa16.34■□□□□ 0.21
AC048338.1-201ENST00000535844 KIF27Q86VH2 1401 aa16.31■□□□□ 0.2
AC048338.1-201ENST00000535844 CC2D2AQ9P2K1 1620 aa16.3■□□□□ 0.2
AC048338.1-201ENST00000535844 NCAPD3P42695 1498 aa16.27■□□□□ 0.19
AC048338.1-201ENST00000535844 HMGXB3Q12766 1538 aa16.26■□□□□ 0.19
AC048338.1-201ENST00000535844 ARHGAP35Q9NRY4 1499 aa16.25■□□□□ 0.19
AC048338.1-201ENST00000535844 CLSPNQ9HAW4 1339 aa16.24■□□□□ 0.19
AC048338.1-201ENST00000535844 RRBP1Q9P2E9 1410 aaKnown RBP16.23■□□□□ 0.19
AC048338.1-201ENST00000535844 CFTRP13569 1480 aa16.22■□□□□ 0.19
AC048338.1-201ENST00000535844 CCNB3Q8WWL7 1395 aa16.22■□□□□ 0.19
AC048338.1-201ENST00000535844 CUX2O14529 1486 aa16.18■□□□□ 0.18
AC048338.1-201ENST00000535844 IGF1RP08069 1367 aa16.13■□□□□ 0.17
AC048338.1-201ENST00000535844 P3H3Q8IVL6 736 aa16.12■□□□□ 0.17
AC048338.1-201ENST00000535844 RAB3GAP2Q9H2M9 1393 aa16.12■□□□□ 0.17
AC048338.1-201ENST00000535844 ATP1B4Q9UN42 357 aaPredicted RBP16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms