RNA–Protein interactions for RNA: ENST00000535844.1

AC048338.1-201, humanhuman

APPRIS P1 TSL 2 BASIC

Gene AC048338.1, Length 2,748 nt, Biotype nonsense mediated decay.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC048338.1-201ENST00000535844 NISCHQ9Y2I1 1504 aa22.55■■□□□ 1.2
AC048338.1-201ENST00000535844 SHROOM4Q9ULL8 1493 aa19.62■□□□□ 0.73
AC048338.1-201ENST00000535844 SUPT5HO00267 1087 aaKnown RBP19.3■□□□□ 0.68
AC048338.1-201ENST00000535844 ZCCHC6Q5VYS8 1495 aaKnown RBP19.09■□□□□ 0.65
AC048338.1-201ENST00000535844 CCDC180Q9P1Z9 1646 aa18.99■□□□□ 0.63
AC048338.1-201ENST00000535844 DCAF8L2P0C7V8 631 aa18.95■□□□□ 0.62
AC048338.1-201ENST00000535844 PELP1Q8IZL8 1130 aaKnown RBP18.87■□□□□ 0.61
AC048338.1-201ENST00000535844 MYO15BQ96JP2 1530 aa18.74■□□□□ 0.59
AC048338.1-201ENST00000535844 CHIC1Q5VXU3 224 aa18.71■□□□□ 0.59
AC048338.1-201ENST00000535844 MYT1Q01538 1121 aa18.47■□□□□ 0.55
AC048338.1-201ENST00000535844 PCGF6Q9BYE7 350 aa18.4■□□□□ 0.54
AC048338.1-201ENST00000535844 HRCP23327 699 aa18.39■□□□□ 0.53
AC048338.1-201ENST00000535844 DCAF1Q9Y4B6 1507 aa18.35■□□□□ 0.53
AC048338.1-201ENST00000535844 LOC105371045A0A1W2PR82 267 aa18.28■□□□□ 0.52
AC048338.1-201ENST00000535844 ABCC9O60706 1549 aa18.23■□□□□ 0.51
AC048338.1-201ENST00000535844 PPARGC1BQ86YN6 1023 aaKnown RBP18.16■□□□□ 0.5
AC048338.1-201ENST00000535844 SCRIBQ14160 1630 aa18.05■□□□□ 0.48
AC048338.1-201ENST00000535844 RSF1Q96T23 1441 aaPredicted RBP17.95■□□□□ 0.46
AC048338.1-201ENST00000535844 TRIM26Q12899 539 aaPredicted RBP17.87■□□□□ 0.45
AC048338.1-201ENST00000535844 FAM9AQ8IZU1 332 aaPredicted RBP17.87■□□□□ 0.45
AC048338.1-201ENST00000535844 TRIM41Q8WV44 630 aa17.86■□□□□ 0.45
AC048338.1-201ENST00000535844 RB1CC1Q8TDY2 1594 aa17.85■□□□□ 0.45
AC048338.1-201ENST00000535844 EHMT2Q96KQ7 1210 aa17.84■□□□□ 0.45
AC048338.1-201ENST00000535844 CECR2Q9BXF3 1484 aa17.69■□□□□ 0.42
AC048338.1-201ENST00000535844 TTBK1Q5TCY1 1321 aaPredicted RBP17.67■□□□□ 0.42
AC048338.1-201ENST00000535844 SCAF1Q9H7N4 1312 aaKnown RBP17.66■□□□□ 0.42
AC048338.1-201ENST00000535844 MROH2BQ7Z745 1585 aa17.61■□□□□ 0.41
AC048338.1-201ENST00000535844 NACADO15069 1562 aa17.55■□□□□ 0.4
AC048338.1-201ENST00000535844 WIZO95785 1651 aa17.54■□□□□ 0.4
AC048338.1-201ENST00000535844 ZEB1P37275 1124 aaPredicted RBP17.46■□□□□ 0.39
AC048338.1-201ENST00000535844 PABPN1Q86U42 306 aaKnown RBP eCLIP17.39■□□□□ 0.37
AC048338.1-201ENST00000535844 BAZ1AQ9NRL2 1556 aaPredicted RBP17.35■□□□□ 0.37
AC048338.1-201ENST00000535844 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.27■□□□□ 0.36
AC048338.1-201ENST00000535844 EIF4G1Q04637 1599 aaKnown RBP17.27■□□□□ 0.36
AC048338.1-201ENST00000535844 ABCC8Q09428 1581 aa17.26■□□□□ 0.35
AC048338.1-201ENST00000535844 CCDC88BA6NC98 1476 aa17.2■□□□□ 0.34
AC048338.1-201ENST00000535844 CCER1Q8TC90 406 aaPredicted RBP17.19■□□□□ 0.34
AC048338.1-201ENST00000535844 TOP2AP11388 1531 aaKnown RBP17.17■□□□□ 0.34
AC048338.1-201ENST00000535844 SMARCA4P51532 1647 aa17.15■□□□□ 0.34
AC048338.1-201ENST00000535844 UNC13AQ9UPW8 1703 aa17.14■□□□□ 0.33
AC048338.1-201ENST00000535844 SMARCA2P51531 1590 aa17.12■□□□□ 0.33
AC048338.1-201ENST00000535844 SOGA1O94964 1423 aa17.12■□□□□ 0.33
AC048338.1-201ENST00000535844 CEP162Q5TB80 1403 aa17.08■□□□□ 0.32
AC048338.1-201ENST00000535844 RUSC2Q8N2Y8 1516 aa17.04■□□□□ 0.32
AC048338.1-201ENST00000535844 ACIN1Q9UKV3 1341 aaKnown RBP17.03■□□□□ 0.32
AC048338.1-201ENST00000535844 PRKCSHP14314 528 aaPredicted RBP17.03■□□□□ 0.32
AC048338.1-201ENST00000535844 UBTFP17480 764 aaKnown RBP17.03■□□□□ 0.32
AC048338.1-201ENST00000535844 NEUROD1Q13562 356 aa17.02■□□□□ 0.32
AC048338.1-201ENST00000535844 BICRAQ9NZM4 1560 aa17■□□□□ 0.31
AC048338.1-201ENST00000535844 WRNQ14191 1432 aaPredicted RBP eCLIP16.98■□□□□ 0.31
AC048338.1-201ENST00000535844 CSRNP3Q8WYN3 585 aa16.98■□□□□ 0.31
AC048338.1-201ENST00000535844 GTF3C3Q9Y5Q9 886 aa16.97■□□□□ 0.31
AC048338.1-201ENST00000535844 TNIKQ9UKE5 1360 aa16.96■□□□□ 0.31
AC048338.1-201ENST00000535844 BCL11AQ9H165 835 aa16.95■□□□□ 0.3
AC048338.1-201ENST00000535844 DIEXFQ68CQ4 756 aaKnown RBP16.9■□□□□ 0.3
AC048338.1-201ENST00000535844 EEA1Q15075 1411 aa16.87■□□□□ 0.29
AC048338.1-201ENST00000535844 GOLGA3Q08378 1498 aa16.86■□□□□ 0.29
AC048338.1-201ENST00000535844 RANGAP1P46060 587 aaPredicted RBP16.82■□□□□ 0.28
AC048338.1-201ENST00000535844 SYNJ1O43426 1573 aa16.8■□□□□ 0.28
AC048338.1-201ENST00000535844 HNRNPUL2Q1KMD3 747 aaKnown RBP16.8■□□□□ 0.28
AC048338.1-201ENST00000535844 ERICH6Q7L0X2 663 aa16.76■□□□□ 0.27
AC048338.1-201ENST00000535844 CENPBP07199 599 aaPredicted RBP16.74■□□□□ 0.27
AC048338.1-201ENST00000535844 CEP164Q9UPV0 1460 aa16.73■□□□□ 0.27
AC048338.1-201ENST00000535844 CLIP1P30622 1438 aa16.72■□□□□ 0.27
AC048338.1-201ENST00000535844 PEG3Q9GZU2 1588 aa16.71■□□□□ 0.27
AC048338.1-201ENST00000535844 ZNF316A6NFI3 1004 aaPredicted RBP16.69■□□□□ 0.26
AC048338.1-201ENST00000535844 ATAD2BQ9ULI0 1458 aa16.68■□□□□ 0.26
AC048338.1-201ENST00000535844 BAZ1BQ9UIG0 1483 aaKnown RBP16.68■□□□□ 0.26
AC048338.1-201ENST00000535844 RAPGEF2Q9Y4G8 1499 aa16.67■□□□□ 0.26
AC048338.1-201ENST00000535844 KIF21BO75037 1637 aa16.67■□□□□ 0.26
AC048338.1-201ENST00000535844 YTHDC1Q96MU7 727 aaKnown RBP16.66■□□□□ 0.26
AC048338.1-201ENST00000535844 APLP2Q06481 763 aa16.63■□□□□ 0.25
AC048338.1-201ENST00000535844 VPS8Q8N3P4 1428 aa16.63■□□□□ 0.25
AC048338.1-201ENST00000535844 MIER1Q8N108 512 aa16.55■□□□□ 0.24
AC048338.1-201ENST00000535844 TOP2BQ02880 1626 aa16.5■□□□□ 0.23
AC048338.1-201ENST00000535844 SLC24A1O60721 1099 aa16.5■□□□□ 0.23
AC048338.1-201ENST00000535844 DNAJC5BQ9UF47 199 aa16.47■□□□□ 0.23
AC048338.1-201ENST00000535844 KANK4Q5T7N3 995 aaPredicted RBP16.44■□□□□ 0.22
AC048338.1-201ENST00000535844 BIVM-ERCC5R4GMW8 1640 aa16.41■□□□□ 0.22
AC048338.1-201ENST00000535844 ARAP1Q96P48 1450 aa16.41■□□□□ 0.22
AC048338.1-201ENST00000535844 PRXQ9BXM0 1461 aa16.39■□□□□ 0.21
AC048338.1-201ENST00000535844 ANP32EQ9BTT0 268 aa16.38■□□□□ 0.21
AC048338.1-201ENST00000535844 CUX1P39880 1505 aa16.37■□□□□ 0.21
AC048338.1-201ENST00000535844 ERICH3Q5RHP9 1530 aa16.36■□□□□ 0.21
AC048338.1-201ENST00000535844 DHX57Q6P158 1386 aaKnown RBP16.36■□□□□ 0.21
AC048338.1-201ENST00000535844 ITGAEP38570 1179 aa16.34■□□□□ 0.21
AC048338.1-201ENST00000535844 KIF27Q86VH2 1401 aa16.31■□□□□ 0.2
AC048338.1-201ENST00000535844 CC2D2AQ9P2K1 1620 aa16.3■□□□□ 0.2
AC048338.1-201ENST00000535844 NCAPD3P42695 1498 aa16.27■□□□□ 0.19
AC048338.1-201ENST00000535844 HMGXB3Q12766 1538 aa16.26■□□□□ 0.19
AC048338.1-201ENST00000535844 ARHGAP35Q9NRY4 1499 aa16.25■□□□□ 0.19
AC048338.1-201ENST00000535844 CLSPNQ9HAW4 1339 aa16.24■□□□□ 0.19
AC048338.1-201ENST00000535844 RRBP1Q9P2E9 1410 aaKnown RBP16.23■□□□□ 0.19
AC048338.1-201ENST00000535844 CFTRP13569 1480 aa16.22■□□□□ 0.19
AC048338.1-201ENST00000535844 CCNB3Q8WWL7 1395 aa16.22■□□□□ 0.19
AC048338.1-201ENST00000535844 CUX2O14529 1486 aa16.18■□□□□ 0.18
AC048338.1-201ENST00000535844 IGF1RP08069 1367 aa16.13■□□□□ 0.17
AC048338.1-201ENST00000535844 P3H3Q8IVL6 736 aa16.12■□□□□ 0.17
AC048338.1-201ENST00000535844 RAB3GAP2Q9H2M9 1393 aa16.12■□□□□ 0.17
AC048338.1-201ENST00000535844 ATP1B4Q9UN42 357 aaPredicted RBP16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms