RNA–Protein interactions for RNA: ENST00000439706.5

SLC38A1-202, Transcript of solute carrier family 38 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC38A1, Length 3,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-202ENST00000439706 NISCHQ9Y2I1 1504 aa23.44■■□□□ 1.34
SLC38A1-202ENST00000439706 SHROOM4Q9ULL8 1493 aa21.39■■□□□ 1.01
SLC38A1-202ENST00000439706 SUPT5HO00267 1087 aaKnown RBP21.32■■□□□ 1
SLC38A1-202ENST00000439706 PCGF6Q9BYE7 350 aa20.89■□□□□ 0.93
SLC38A1-202ENST00000439706 PPARGC1BQ86YN6 1023 aaKnown RBP20.85■□□□□ 0.93
SLC38A1-202ENST00000439706 HRCP23327 699 aa20.78■□□□□ 0.92
SLC38A1-202ENST00000439706 DCAF8L2P0C7V8 631 aa20.62■□□□□ 0.89
SLC38A1-202ENST00000439706 CHIC1Q5VXU3 224 aa20.43■□□□□ 0.86
SLC38A1-202ENST00000439706 MYO15BQ96JP2 1530 aa20.37■□□□□ 0.85
SLC38A1-202ENST00000439706 LOC105371045A0A1W2PR82 267 aa20.34■□□□□ 0.85
SLC38A1-202ENST00000439706 EHMT2Q96KQ7 1210 aa20.16■□□□□ 0.82
SLC38A1-202ENST00000439706 FAM9AQ8IZU1 332 aaPredicted RBP19.89■□□□□ 0.77
SLC38A1-202ENST00000439706 ZCCHC6Q5VYS8 1495 aaKnown RBP19.88■□□□□ 0.77
SLC38A1-202ENST00000439706 TRIM26Q12899 539 aaPredicted RBP19.84■□□□□ 0.77
SLC38A1-202ENST00000439706 SCAF1Q9H7N4 1312 aaKnown RBP19.74■□□□□ 0.75
SLC38A1-202ENST00000439706 CCDC180Q9P1Z9 1646 aa19.72■□□□□ 0.75
SLC38A1-202ENST00000439706 PELP1Q8IZL8 1130 aaKnown RBP19.56■□□□□ 0.72
SLC38A1-202ENST00000439706 TTBK1Q5TCY1 1321 aaPredicted RBP19.56■□□□□ 0.72
SLC38A1-202ENST00000439706 DCAF1Q9Y4B6 1507 aa19.52■□□□□ 0.71
SLC38A1-202ENST00000439706 TRIM41Q8WV44 630 aa19.47■□□□□ 0.71
SLC38A1-202ENST00000439706 ZEB1P37275 1124 aaPredicted RBP19.45■□□□□ 0.7
SLC38A1-202ENST00000439706 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.42■□□□□ 0.7
SLC38A1-202ENST00000439706 NEUROD1Q13562 356 aa19.34■□□□□ 0.69
SLC38A1-202ENST00000439706 CCER1Q8TC90 406 aaPredicted RBP19.33■□□□□ 0.68
SLC38A1-202ENST00000439706 GTF3C3Q9Y5Q9 886 aa19.28■□□□□ 0.68
SLC38A1-202ENST00000439706 YTHDC1Q96MU7 727 aaKnown RBP19.24■□□□□ 0.67
SLC38A1-202ENST00000439706 ACIN1Q9UKV3 1341 aaKnown RBP19.21■□□□□ 0.67
SLC38A1-202ENST00000439706 DIEXFQ68CQ4 756 aaKnown RBP19.12■□□□□ 0.65
SLC38A1-202ENST00000439706 CENPBP07199 599 aaPredicted RBP19.05■□□□□ 0.64
SLC38A1-202ENST00000439706 ABCC9O60706 1549 aa18.82■□□□□ 0.6
SLC38A1-202ENST00000439706 RSF1Q96T23 1441 aaPredicted RBP18.75■□□□□ 0.59
SLC38A1-202ENST00000439706 RANGAP1P46060 587 aaPredicted RBP18.72■□□□□ 0.59
SLC38A1-202ENST00000439706 HNRNPUL2Q1KMD3 747 aaKnown RBP18.72■□□□□ 0.59
SLC38A1-202ENST00000439706 MIER1Q8N108 512 aa18.69■□□□□ 0.58
SLC38A1-202ENST00000439706 SCRIBQ14160 1630 aa18.66■□□□□ 0.58
SLC38A1-202ENST00000439706 UBTFP17480 764 aaKnown RBP18.65■□□□□ 0.58
SLC38A1-202ENST00000439706 ZNF316A6NFI3 1004 aaPredicted RBP18.65■□□□□ 0.58
SLC38A1-202ENST00000439706 RB1CC1Q8TDY2 1594 aa18.63■□□□□ 0.57
SLC38A1-202ENST00000439706 MYT1Q01538 1121 aa18.61■□□□□ 0.57
SLC38A1-202ENST00000439706 CECR2Q9BXF3 1484 aa18.41■□□□□ 0.54
SLC38A1-202ENST00000439706 BCANQ96GW7 911 aa18.35■□□□□ 0.53
SLC38A1-202ENST00000439706 CEP162Q5TB80 1403 aa18.28■□□□□ 0.52
SLC38A1-202ENST00000439706 MROH2BQ7Z745 1585 aa18.28■□□□□ 0.52
SLC38A1-202ENST00000439706 APLP2Q06481 763 aa18.28■□□□□ 0.52
SLC38A1-202ENST00000439706 SOGA1O94964 1423 aa18.23■□□□□ 0.51
SLC38A1-202ENST00000439706 CSRNP3Q8WYN3 585 aa18.23■□□□□ 0.51
SLC38A1-202ENST00000439706 WIZO95785 1651 aa18.21■□□□□ 0.51
SLC38A1-202ENST00000439706 ITGAEP38570 1179 aa18.21■□□□□ 0.51
SLC38A1-202ENST00000439706 SUPT16HQ9Y5B9 1047 aaKnown RBP18.21■□□□□ 0.51
SLC38A1-202ENST00000439706 CCDC88BA6NC98 1476 aa18.19■□□□□ 0.5
SLC38A1-202ENST00000439706 ABCC8Q09428 1581 aa18.18■□□□□ 0.5
SLC38A1-202ENST00000439706 NACADO15069 1562 aa18.18■□□□□ 0.5
SLC38A1-202ENST00000439706 KCNH8Q96L42 1107 aa18.13■□□□□ 0.49
SLC38A1-202ENST00000439706 RUSC2Q8N2Y8 1516 aa18.12■□□□□ 0.49
SLC38A1-202ENST00000439706 TSHZ2Q9NRE2 1034 aa18.08■□□□□ 0.48
SLC38A1-202ENST00000439706 BAZ1AQ9NRL2 1556 aaPredicted RBP18.07■□□□□ 0.48
SLC38A1-202ENST00000439706 EIF4G1Q04637 1599 aaKnown RBP18.05■□□□□ 0.48
SLC38A1-202ENST00000439706 TNIKQ9UKE5 1360 aa18.01■□□□□ 0.47
SLC38A1-202ENST00000439706 FKBP8Q14318 412 aa17.99■□□□□ 0.47
SLC38A1-202ENST00000439706 ANP32EQ9BTT0 268 aa17.98■□□□□ 0.47
SLC38A1-202ENST00000439706 HIRIP3Q9BW71 556 aaPredicted RBP17.98■□□□□ 0.47
SLC38A1-202ENST00000439706 WRNQ14191 1432 aaPredicted RBP eCLIP17.97■□□□□ 0.47
SLC38A1-202ENST00000439706 BCL11AQ9H165 835 aa17.95■□□□□ 0.46
SLC38A1-202ENST00000439706 PABPN1Q86U42 306 aaKnown RBP eCLIP17.91■□□□□ 0.46
SLC38A1-202ENST00000439706 TRIM52Q96A61 297 aa17.9■□□□□ 0.46
SLC38A1-202ENST00000439706 DDX10Q13206 875 aaKnown RBP17.89■□□□□ 0.45
SLC38A1-202ENST00000439706 TOP2AP11388 1531 aaKnown RBP17.87■□□□□ 0.45
SLC38A1-202ENST00000439706 CLIP1P30622 1438 aa17.86■□□□□ 0.45
SLC38A1-202ENST00000439706 KANK4Q5T7N3 995 aaPredicted RBP17.82■□□□□ 0.44
SLC38A1-202ENST00000439706 SMARCA2P51531 1590 aa17.81■□□□□ 0.44
SLC38A1-202ENST00000439706 GOLGA3Q08378 1498 aa17.79■□□□□ 0.44
SLC38A1-202ENST00000439706 SMARCA4P51532 1647 aa17.79■□□□□ 0.44
SLC38A1-202ENST00000439706 NEFLP07196 543 aa17.79■□□□□ 0.44
SLC38A1-202ENST00000439706 IRX6P78412 446 aaPredicted RBP17.79■□□□□ 0.44
SLC38A1-202ENST00000439706 ATP1B4Q9UN42 357 aaPredicted RBP17.78■□□□□ 0.44
SLC38A1-202ENST00000439706 RBM19Q9Y4C8 960 aaKnown RBP17.73■□□□□ 0.43
SLC38A1-202ENST00000439706 DHX57Q6P158 1386 aaKnown RBP17.73■□□□□ 0.43
SLC38A1-202ENST00000439706 SIN3AQ96ST3 1273 aa17.71■□□□□ 0.43
SLC38A1-202ENST00000439706 EEA1Q15075 1411 aa17.69■□□□□ 0.42
SLC38A1-202ENST00000439706 ERICH6Q7L0X2 663 aa17.65■□□□□ 0.42
SLC38A1-202ENST00000439706 VPS8Q8N3P4 1428 aa17.65■□□□□ 0.42
SLC38A1-202ENST00000439706 FAM50AQ14320 339 aaKnown RBP17.64■□□□□ 0.41
SLC38A1-202ENST00000439706 UNC13AQ9UPW8 1703 aa17.64■□□□□ 0.41
SLC38A1-202ENST00000439706 CLSPNQ9HAW4 1339 aa17.64■□□□□ 0.41
SLC38A1-202ENST00000439706 RAPGEF2Q9Y4G8 1499 aa17.63■□□□□ 0.41
SLC38A1-202ENST00000439706 CNGB1Q14028 1251 aaPredicted RBP17.62■□□□□ 0.41
SLC38A1-202ENST00000439706 CEP164Q9UPV0 1460 aa17.59■□□□□ 0.41
SLC38A1-202ENST00000439706 P3H3Q8IVL6 736 aa17.56■□□□□ 0.4
SLC38A1-202ENST00000439706 ANP32CO43423 234 aa17.53■□□□□ 0.4
SLC38A1-202ENST00000439706 MSH5O43196 834 aa17.52■□□□□ 0.4
SLC38A1-202ENST00000439706 SENP3-EIF4A1A0A087X0R7 540 aa17.51■□□□□ 0.39
SLC38A1-202ENST00000439706 HNRNPUQ00839 825 aaKnown RBP eCLIP17.5■□□□□ 0.39
SLC38A1-202ENST00000439706 SYNJ1O43426 1573 aa17.47■□□□□ 0.39
SLC38A1-202ENST00000439706 KIF21BO75037 1637 aa17.46■□□□□ 0.39
SLC38A1-202ENST00000439706 RAB3GAP2Q9H2M9 1393 aa17.44■□□□□ 0.38
SLC38A1-202ENST00000439706 CDK11AQ9UQ88 783 aaPredicted RBP17.43■□□□□ 0.38
SLC38A1-202ENST00000439706 NBR1Q14596 966 aa17.42■□□□□ 0.38
SLC38A1-202ENST00000439706 CCNB3Q8WWL7 1395 aa17.41■□□□□ 0.38
SLC38A1-202ENST00000439706 PEG3Q9GZU2 1588 aa17.39■□□□□ 0.37
SLC38A1-202ENST00000439706 BICRAQ9NZM4 1560 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms