RNA–Protein interactions for RNA: ENST00000610642.4

SLC6A6-203, Transcript of solute carrier family 6 member 6, humanhuman

TSL 2

Gene SLC6A6, Length 1,983 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A6-203ENST00000610642 NISCHQ9Y2I1 1504 aa43.69■■■■■ 4.58
SLC6A6-203ENST00000610642 CCDC180Q9P1Z9 1646 aa38.3■■■■□ 3.72
SLC6A6-203ENST00000610642 ZCCHC6Q5VYS8 1495 aaKnown RBP36.64■■■■□ 3.46
SLC6A6-203ENST00000610642 ABCC9O60706 1549 aa36.48■■■■□ 3.43
SLC6A6-203ENST00000610642 DCAF1Q9Y4B6 1507 aa36.16■■■■□ 3.38
SLC6A6-203ENST00000610642 DCAF8L2P0C7V8 631 aa36.15■■■■□ 3.38
SLC6A6-203ENST00000610642 MYO15BQ96JP2 1530 aa35.89■■■■□ 3.34
SLC6A6-203ENST00000610642 NACADO15069 1562 aa35.76■■■■□ 3.31
SLC6A6-203ENST00000610642 RB1CC1Q8TDY2 1594 aa35.53■■■■□ 3.28
SLC6A6-203ENST00000610642 SHROOM4Q9ULL8 1493 aa35.31■■■■□ 3.24
SLC6A6-203ENST00000610642 SCRIBQ14160 1630 aa35.11■■■■□ 3.21
SLC6A6-203ENST00000610642 UNC13AQ9UPW8 1703 aa34.75■■■■□ 3.15
SLC6A6-203ENST00000610642 BICRAQ9NZM4 1560 aa34.43■■■■□ 3.1
SLC6A6-203ENST00000610642 PABPN1Q86U42 306 aaKnown RBP eCLIP34.31■■■■□ 3.08
SLC6A6-203ENST00000610642 CECR2Q9BXF3 1484 aa33.95■■■■□ 3.02
SLC6A6-203ENST00000610642 SUPT5HO00267 1087 aaKnown RBP33.81■■■■□ 3
SLC6A6-203ENST00000610642 BAZ1AQ9NRL2 1556 aaPredicted RBP33.78■■■■□ 3
SLC6A6-203ENST00000610642 RSF1Q96T23 1441 aaPredicted RBP33.74■■■□□ 2.99
SLC6A6-203ENST00000610642 MROH2BQ7Z745 1585 aa33.71■■■□□ 2.99
SLC6A6-203ENST00000610642 SMARCA4P51532 1647 aa33.66■■■□□ 2.98
SLC6A6-203ENST00000610642 EIF4G1Q04637 1599 aaKnown RBP33.44■■■□□ 2.94
SLC6A6-203ENST00000610642 WIZO95785 1651 aa33.42■■■□□ 2.94
SLC6A6-203ENST00000610642 PEG3Q9GZU2 1588 aa33.29■■■□□ 2.92
SLC6A6-203ENST00000610642 ATAD2BQ9ULI0 1458 aa33.2■■■□□ 2.9
SLC6A6-203ENST00000610642 SMARCA2P51531 1590 aa33.2■■■□□ 2.9
SLC6A6-203ENST00000610642 TOP2AP11388 1531 aaKnown RBP33.1■■■□□ 2.89
SLC6A6-203ENST00000610642 CC2D2AQ9P2K1 1620 aa33.03■■■□□ 2.88
SLC6A6-203ENST00000610642 BAZ1BQ9UIG0 1483 aaKnown RBP33■■■□□ 2.87
SLC6A6-203ENST00000610642 NCAPD3P42695 1498 aa32.99■■■□□ 2.87
SLC6A6-203ENST00000610642 HMGXB3Q12766 1538 aa32.92■■■□□ 2.86
SLC6A6-203ENST00000610642 CCDC88BA6NC98 1476 aa32.73■■■□□ 2.83
SLC6A6-203ENST00000610642 DNAJC5BQ9UF47 199 aa32.47■■■□□ 2.79
SLC6A6-203ENST00000610642 CHIC1Q5VXU3 224 aa32.19■■■□□ 2.74
SLC6A6-203ENST00000610642 CFTRP13569 1480 aa32.15■■■□□ 2.74
SLC6A6-203ENST00000610642 CADPSQ9ULU8 1353 aa32.12■■■□□ 2.73
SLC6A6-203ENST00000610642 PRDM2Q13029 1718 aa31.97■■■□□ 2.71
SLC6A6-203ENST00000610642 LAMC3Q9Y6N6 1575 aa31.94■■■□□ 2.7
SLC6A6-203ENST00000610642 ABCC8Q09428 1581 aa31.91■■■□□ 2.7
SLC6A6-203ENST00000610642 NESP48681 1621 aa31.9■■■□□ 2.7
SLC6A6-203ENST00000610642 TRIM41Q8WV44 630 aa31.85■■■□□ 2.69
SLC6A6-203ENST00000610642 WRNQ14191 1432 aaPredicted RBP eCLIP31.78■■■□□ 2.68
SLC6A6-203ENST00000610642 FANCD2Q9BXW9 1451 aa31.75■■■□□ 2.67
SLC6A6-203ENST00000610642 PDS5BQ9NTI5 1447 aa31.7■■■□□ 2.67
SLC6A6-203ENST00000610642 SYNJ1O43426 1573 aa31.64■■■□□ 2.66
SLC6A6-203ENST00000610642 CEP164Q9UPV0 1460 aa31.6■■■□□ 2.65
SLC6A6-203ENST00000610642 TOP2BQ02880 1626 aa31.57■■■□□ 2.64
SLC6A6-203ENST00000610642 CUX1P39880 1505 aa31.55■■■□□ 2.64
SLC6A6-203ENST00000610642 BIVM-ERCC5R4GMW8 1640 aa31.55■■■□□ 2.64
SLC6A6-203ENST00000610642 KIF21AQ7Z4S6 1674 aa31.53■■■□□ 2.64
SLC6A6-203ENST00000610642 DNMBPQ6XZF7 1577 aa31.41■■■□□ 2.62
SLC6A6-203ENST00000610642 URB2Q14146 1524 aaKnown RBP31.36■■■□□ 2.61
SLC6A6-203ENST00000610642 TOPBP1Q92547 1522 aa31.36■■■□□ 2.61
SLC6A6-203ENST00000610642 ERCC6Q03468 1493 aa31.34■■■□□ 2.61
SLC6A6-203ENST00000610642 MRC2Q9UBG0 1479 aa31.31■■■□□ 2.6
SLC6A6-203ENST00000610642 FGD5Q6ZNL6 1462 aa31.27■■■□□ 2.6
SLC6A6-203ENST00000610642 SOGA1O94964 1423 aa31.23■■■□□ 2.59
SLC6A6-203ENST00000610642 FAM9AQ8IZU1 332 aaPredicted RBP31.21■■■□□ 2.59
SLC6A6-203ENST00000610642 POLA1P09884 1462 aaPredicted RBP31.18■■■□□ 2.58
SLC6A6-203ENST00000610642 EEA1Q15075 1411 aa31.16■■■□□ 2.58
SLC6A6-203ENST00000610642 WDR62O43379 1518 aa31.16■■■□□ 2.58
SLC6A6-203ENST00000610642 THOC2Q8NI27 1593 aaKnown RBP31.13■■■□□ 2.57
SLC6A6-203ENST00000610642 RUSC2Q8N2Y8 1516 aa31.13■■■□□ 2.57
SLC6A6-203ENST00000610642 RAD54L2Q9Y4B4 1467 aa31.05■■■□□ 2.56
SLC6A6-203ENST00000610642 KIF27Q86VH2 1401 aa31.02■■■□□ 2.56
SLC6A6-203ENST00000610642 ABCA10Q8WWZ4 1543 aa31.01■■■□□ 2.55
SLC6A6-203ENST00000610642 CUX2O14529 1486 aa31■■■□□ 2.55
SLC6A6-203ENST00000610642 CSRNP3Q8WYN3 585 aa30.99■■■□□ 2.55
SLC6A6-203ENST00000610642 WDR97A6NE52 1622 aa30.93■■■□□ 2.54
SLC6A6-203ENST00000610642 TARBP1Q13395 1621 aaKnown RBP30.92■■■□□ 2.54
SLC6A6-203ENST00000610642 LOC105371045A0A1W2PR82 267 aa30.91■■■□□ 2.54
SLC6A6-203ENST00000610642 IFT140Q96RY7 1462 aa30.87■■■□□ 2.53
SLC6A6-203ENST00000610642 TDRD9Q8NDG6 1382 aaKnown RBP30.79■■■□□ 2.52
SLC6A6-203ENST00000610642 ABCA5Q8WWZ7 1642 aa30.78■■■□□ 2.52
SLC6A6-203ENST00000610642 IGF1RP08069 1367 aa30.76■■■□□ 2.52
SLC6A6-203ENST00000610642 KIF21BO75037 1637 aa30.76■■■□□ 2.51
SLC6A6-203ENST00000610642 EHMT2Q96KQ7 1210 aa30.75■■■□□ 2.51
SLC6A6-203ENST00000610642 GAPVD1Q14C86 1478 aa30.74■■■□□ 2.51
SLC6A6-203ENST00000610642 PRXQ9BXM0 1461 aa30.71■■■□□ 2.51
SLC6A6-203ENST00000610642 GOLGA3Q08378 1498 aa30.69■■■□□ 2.5
SLC6A6-203ENST00000610642 ZNF608Q9ULD9 1512 aaPredicted RBP30.67■■■□□ 2.5
SLC6A6-203ENST00000610642 AQRO60306 1485 aaKnown RBP eCLIP30.66■■■□□ 2.52e-7■■■■■ 27.2
SLC6A6-203ENST00000610642 ERICH3Q5RHP9 1530 aa30.65■■■□□ 2.5
SLC6A6-203ENST00000610642 RAPGEF2Q9Y4G8 1499 aa30.62■■■□□ 2.49
SLC6A6-203ENST00000610642 CARMIL1Q5VZK9 1371 aa30.61■■■□□ 2.49
SLC6A6-203ENST00000610642 CUL7Q14999 1698 aa30.59■■■□□ 2.49
SLC6A6-203ENST00000610642 EIF4G3O43432 1585 aaKnown RBP30.58■■■□□ 2.49
SLC6A6-203ENST00000610642 PBRM1Q86U86 1689 aa30.58■■■□□ 2.49
SLC6A6-203ENST00000610642 GRIN2BQ13224 1484 aa30.56■■■□□ 2.48
SLC6A6-203ENST00000610642 UBTFP17480 764 aaKnown RBP30.55■■■□□ 2.48
SLC6A6-203ENST00000610642 TNIKQ9UKE5 1360 aa30.52■■■□□ 2.48
SLC6A6-203ENST00000610642 FHAD1B1AJZ9 1412 aa30.41■■■□□ 2.46
SLC6A6-203ENST00000610642 ADAMTS12P58397 1594 aa30.41■■■□□ 2.46
SLC6A6-203ENST00000610642 SNAPC4Q5SXM2 1469 aa30.39■■■□□ 2.45
SLC6A6-203ENST00000610642 MAGI1Q96QZ7 1491 aaPredicted RBP30.36■■■□□ 2.45
SLC6A6-203ENST00000610642 CEP162Q5TB80 1403 aa30.32■■■□□ 2.44
SLC6A6-203ENST00000610642 SYNJ2O15056 1496 aa30.23■■■□□ 2.43
SLC6A6-203ENST00000610642 GRIN2AQ12879 1464 aa30.18■■■□□ 2.42
SLC6A6-203ENST00000610642 CTTNBP2Q8WZ74 1663 aa30.18■■■□□ 2.42
SLC6A6-203ENST00000610642 CLIP1P30622 1438 aa30.17■■■□□ 2.42
SLC6A6-203ENST00000610642 CHMP7Q8WUX9 453 aaPredicted RBP30.17■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms