RNA–Protein interactions for RNA: ENST00000628474.2

SLC39A9-211, Transcript of solute carrier family 39 member 9, humanhuman

TSL 5

Gene SLC39A9, Length 3,701 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC39A9-211ENST00000628474 NISCHQ9Y2I1 1504 aa18.47■□□□□ 0.55
SLC39A9-211ENST00000628474 PELP1Q8IZL8 1130 aaKnown RBP16.6■□□□□ 0.25
SLC39A9-211ENST00000628474 CCDC180Q9P1Z9 1646 aa16.29■□□□□ 0.2
SLC39A9-211ENST00000628474 MYT1Q01538 1121 aa16.18■□□□□ 0.18
SLC39A9-211ENST00000628474 PPARGC1BQ86YN6 1023 aaKnown RBP15.82■□□□□ 0.12
SLC39A9-211ENST00000628474 HRCP23327 699 aa15.8■□□□□ 0.12
SLC39A9-211ENST00000628474 SCAF1Q9H7N4 1312 aaKnown RBP15.58■□□□□ 0.09
SLC39A9-211ENST00000628474 ZCCHC6Q5VYS8 1495 aaKnown RBP15.56■□□□□ 0.08
SLC39A9-211ENST00000628474 PCGF6Q9BYE7 350 aa15.42■□□□□ 0.06
SLC39A9-211ENST00000628474 PRKCSHP14314 528 aaPredicted RBP15.42■□□□□ 0.06
SLC39A9-211ENST00000628474 DCAF1Q9Y4B6 1507 aa15.4■□□□□ 0.06
SLC39A9-211ENST00000628474 BCL11AQ9H165 835 aa15.31■□□□□ 0.04
SLC39A9-211ENST00000628474 TTBK1Q5TCY1 1321 aaPredicted RBP15.3■□□□□ 0.04
SLC39A9-211ENST00000628474 MYO15BQ96JP2 1530 aa15.27■□□□□ 0.03
SLC39A9-211ENST00000628474 FAM9AQ8IZU1 332 aaPredicted RBP15.14■□□□□ 0.01
SLC39A9-211ENST00000628474 ABCC9O60706 1549 aa15.1■□□□□ 0.01
SLC39A9-211ENST00000628474 NACADO15069 1562 aa15.05■□□□□ 0
SLC39A9-211ENST00000628474 GTF3C3Q9Y5Q9 886 aa15.03■□□□□ -0
SLC39A9-211ENST00000628474 CENPBP07199 599 aaPredicted RBP14.99□□□□□ -0.01
SLC39A9-211ENST00000628474 ERICH6Q7L0X2 663 aa14.95□□□□□ -0.02
SLC39A9-211ENST00000628474 NEUROD1Q13562 356 aa14.9□□□□□ -0.02
SLC39A9-211ENST00000628474 RB1CC1Q8TDY2 1594 aa14.88□□□□□ -0.03
SLC39A9-211ENST00000628474 ACIN1Q9UKV3 1341 aaKnown RBP14.88□□□□□ -0.03
SLC39A9-211ENST00000628474 UNC13AQ9UPW8 1703 aa14.87□□□□□ -0.03
SLC39A9-211ENST00000628474 SCRIBQ14160 1630 aa14.74□□□□□ -0.05
SLC39A9-211ENST00000628474 BICRAQ9NZM4 1560 aa14.64□□□□□ -0.07
SLC39A9-211ENST00000628474 SHROOM4Q9ULL8 1493 aa14.63□□□□□ -0.07
SLC39A9-211ENST00000628474 DCAF8L2P0C7V8 631 aa14.63□□□□□ -0.07
SLC39A9-211ENST00000628474 APLP2Q06481 763 aa14.6□□□□□ -0.07
SLC39A9-211ENST00000628474 CSRNP3Q8WYN3 585 aa14.58□□□□□ -0.08
SLC39A9-211ENST00000628474 YTHDC1Q96MU7 727 aaKnown RBP14.57□□□□□ -0.08
SLC39A9-211ENST00000628474 ANP32EQ9BTT0 268 aa14.57□□□□□ -0.08
SLC39A9-211ENST00000628474 ZEB1P37275 1124 aaPredicted RBP14.52□□□□□ -0.09
SLC39A9-211ENST00000628474 SUPT5HO00267 1087 aaKnown RBP14.52□□□□□ -0.09
SLC39A9-211ENST00000628474 ANO8Q9HCE9 1232 aaPredicted RBP14.38□□□□□ -0.11
SLC39A9-211ENST00000628474 SLC24A1O60721 1099 aa14.36□□□□□ -0.11
SLC39A9-211ENST00000628474 CECR2Q9BXF3 1484 aa14.31□□□□□ -0.12
SLC39A9-211ENST00000628474 TRIM26Q12899 539 aaPredicted RBP14.3□□□□□ -0.12
SLC39A9-211ENST00000628474 DIEXFQ68CQ4 756 aaKnown RBP14.26□□□□□ -0.13
SLC39A9-211ENST00000628474 MROH2BQ7Z745 1585 aa14.26□□□□□ -0.13
SLC39A9-211ENST00000628474 SMARCA4P51532 1647 aa14.25□□□□□ -0.13
SLC39A9-211ENST00000628474 CCDC136Q96JN2 1154 aa14.25□□□□□ -0.13
SLC39A9-211ENST00000628474 RSF1Q96T23 1441 aaPredicted RBP14.25□□□□□ -0.13
SLC39A9-211ENST00000628474 BAZ1AQ9NRL2 1556 aaPredicted RBP14.22□□□□□ -0.13
SLC39A9-211ENST00000628474 PEG3Q9GZU2 1588 aa14.21□□□□□ -0.13
SLC39A9-211ENST00000628474 EIF5BO60841 1220 aaKnown RBP14.21□□□□□ -0.13
SLC39A9-211ENST00000628474 WIZO95785 1651 aa14.16□□□□□ -0.14
SLC39A9-211ENST00000628474 LOC105371045A0A1W2PR82 267 aa14.11□□□□□ -0.15
SLC39A9-211ENST00000628474 PABPN1Q86U42 306 aaKnown RBP eCLIP14.11□□□□□ -0.15
SLC39A9-211ENST00000628474 PLEKHG5O94827 1062 aa14.1□□□□□ -0.15
SLC39A9-211ENST00000628474 TSHZ2Q9NRE2 1034 aa14.06□□□□□ -0.16
SLC39A9-211ENST00000628474 SALL2Q9Y467 1007 aaPredicted RBP14.06□□□□□ -0.16
SLC39A9-211ENST00000628474 EIF4G1Q04637 1599 aaKnown RBP14.05□□□□□ -0.16
SLC39A9-211ENST00000628474 CHIC1Q5VXU3 224 aa14.04□□□□□ -0.16
SLC39A9-211ENST00000628474 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.03□□□□□ -0.16
SLC39A9-211ENST00000628474 TOP2AP11388 1531 aaKnown RBP14.01□□□□□ -0.17
SLC39A9-211ENST00000628474 CCER1Q8TC90 406 aaPredicted RBP13.98□□□□□ -0.17
SLC39A9-211ENST00000628474 BCANQ96GW7 911 aa13.97□□□□□ -0.17
SLC39A9-211ENST00000628474 ATAD2BQ9ULI0 1458 aa13.96□□□□□ -0.18
SLC39A9-211ENST00000628474 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.95□□□□□ -0.18
SLC39A9-211ENST00000628474 SMARCA2P51531 1590 aa13.93□□□□□ -0.18
SLC39A9-211ENST00000628474 RTN4Q9NQC3 1192 aaKnown RBP13.92□□□□□ -0.18
SLC39A9-211ENST00000628474 HMGXB3Q12766 1538 aa13.92□□□□□ -0.18
SLC39A9-211ENST00000628474 UBE2Q2Q8WVN8 375 aa13.88□□□□□ -0.19
SLC39A9-211ENST00000628474 NCAPD3P42695 1498 aa13.88□□□□□ -0.19
SLC39A9-211ENST00000628474 SUPT16HQ9Y5B9 1047 aaKnown RBP13.87□□□□□ -0.19
SLC39A9-211ENST00000628474 CC2D2AQ9P2K1 1620 aa13.86□□□□□ -0.19
SLC39A9-211ENST00000628474 PODXL2Q9NZ53 605 aa13.85□□□□□ -0.19
SLC39A9-211ENST00000628474 PKNOX2Q96KN3 472 aa13.83□□□□□ -0.2
SLC39A9-211ENST00000628474 EHMT2Q96KQ7 1210 aa13.83□□□□□ -0.2
SLC39A9-211ENST00000628474 DEKP35659 375 aaKnown RBP13.82□□□□□ -0.2
SLC39A9-211ENST00000628474 AEBP2Q6ZN18 517 aaPredicted RBP13.82□□□□□ -0.2
SLC39A9-211ENST00000628474 CCDC88BA6NC98 1476 aa13.8□□□□□ -0.2
SLC39A9-211ENST00000628474 MIER1Q8N108 512 aa13.78□□□□□ -0.2
SLC39A9-211ENST00000628474 DAXXQ9UER7 740 aaPredicted RBP13.77□□□□□ -0.21
SLC39A9-211ENST00000628474 BAZ1BQ9UIG0 1483 aaKnown RBP13.76□□□□□ -0.21
SLC39A9-211ENST00000628474 RBM19Q9Y4C8 960 aaKnown RBP13.72□□□□□ -0.21
SLC39A9-211ENST00000628474 PRDM2Q13029 1718 aa13.69□□□□□ -0.22
SLC39A9-211ENST00000628474 NBR1Q14596 966 aa13.67□□□□□ -0.22
SLC39A9-211ENST00000628474 ITGAEP38570 1179 aa13.63□□□□□ -0.23
SLC39A9-211ENST00000628474 ZNF316A6NFI3 1004 aaPredicted RBP13.62□□□□□ -0.23
SLC39A9-211ENST00000628474 IL27Q8NEV9 243 aa13.61□□□□□ -0.23
SLC39A9-211ENST00000628474 MSH5O43196 834 aa13.6□□□□□ -0.23
SLC39A9-211ENST00000628474 A0A0U1RQG5 324 aaPredicted RBP13.55□□□□□ -0.24
SLC39A9-211ENST00000628474 FKBP8Q14318 412 aa13.55□□□□□ -0.24
SLC39A9-211ENST00000628474 CFTRP13569 1480 aa13.55□□□□□ -0.24
SLC39A9-211ENST00000628474 TRIM41Q8WV44 630 aa13.54□□□□□ -0.24
SLC39A9-211ENST00000628474 TIMELESSQ9UNS1 1208 aa13.52□□□□□ -0.25
SLC39A9-211ENST00000628474 ERICH6BQ5W0A0 696 aa13.5□□□□□ -0.25
SLC39A9-211ENST00000628474 MYT1LQ9UL68 1186 aa13.48□□□□□ -0.25
SLC39A9-211ENST00000628474 ABCC8Q09428 1581 aa13.46□□□□□ -0.25
SLC39A9-211ENST00000628474 DNAJC5BQ9UF47 199 aa13.46□□□□□ -0.25
SLC39A9-211ENST00000628474 NEFLP07196 543 aa13.46□□□□□ -0.25
SLC39A9-211ENST00000628474 BIVM-ERCC5R4GMW8 1640 aa13.46□□□□□ -0.26
SLC39A9-211ENST00000628474 RTL5Q5HYW3 569 aaPredicted RBP13.44□□□□□ -0.26
SLC39A9-211ENST00000628474 CLSPNQ9HAW4 1339 aa13.43□□□□□ -0.26
SLC39A9-211ENST00000628474 VSIG10Q8N0Z9 540 aa13.43□□□□□ -0.26
SLC39A9-211ENST00000628474 SYNJ1O43426 1573 aa13.43□□□□□ -0.26
SLC39A9-211ENST00000628474 LAMC3Q9Y6N6 1575 aa13.42□□□□□ -0.26
SLC39A9-211ENST00000628474 TOP2BQ02880 1626 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms