RNA–Protein interactions for RNA: ENST00000569637.6

NIP7-208, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

TSL 2 BASIC

Gene NIP7, Length 1,099 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-208ENST00000569637 NISCHQ9Y2I1 1504 aa36.49■■■■□ 3.43
NIP7-208ENST00000569637 CCDC180Q9P1Z9 1646 aa32.69■■■□□ 2.82
NIP7-208ENST00000569637 ABCC9O60706 1549 aa32.11■■■□□ 2.73
NIP7-208ENST00000569637 RB1CC1Q8TDY2 1594 aa30.86■■■□□ 2.53
NIP7-208ENST00000569637 NACADO15069 1562 aa30.74■■■□□ 2.51
NIP7-208ENST00000569637 DCAF8L2P0C7V8 631 aa30.5■■■□□ 2.47
NIP7-208ENST00000569637 MYO15BQ96JP2 1530 aa30.45■■■□□ 2.47
NIP7-208ENST00000569637 ZCCHC6Q5VYS8 1495 aaKnown RBP30.35■■■□□ 2.45
NIP7-208ENST00000569637 UNC13AQ9UPW8 1703 aa30.23■■■□□ 2.43
NIP7-208ENST00000569637 DCAF1Q9Y4B6 1507 aa30.21■■■□□ 2.43
NIP7-208ENST00000569637 BICRAQ9NZM4 1560 aa29.9■■■□□ 2.38
NIP7-208ENST00000569637 PABPN1Q86U42 306 aaKnown RBP eCLIP29.88■■■□□ 2.37
NIP7-208ENST00000569637 SCRIBQ14160 1630 aa29.73■■■□□ 2.35
NIP7-208ENST00000569637 DNAJC5BQ9UF47 199 aa29.63■■■□□ 2.33
NIP7-208ENST00000569637 SHROOM4Q9ULL8 1493 aa29.61■■■□□ 2.33
NIP7-208ENST00000569637 EIF4G1Q04637 1599 aaKnown RBP29.14■■■□□ 2.26
NIP7-208ENST00000569637 CC2D2AQ9P2K1 1620 aa29.11■■■□□ 2.25
NIP7-208ENST00000569637 CECR2Q9BXF3 1484 aa28.91■■■□□ 2.22
NIP7-208ENST00000569637 SMARCA4P51532 1647 aa28.43■■■□□ 2.14
NIP7-208ENST00000569637 BAZ1AQ9NRL2 1556 aaPredicted RBP28.34■■■□□ 2.13
NIP7-208ENST00000569637 NCAPD3P42695 1498 aa28.3■■■□□ 2.12
NIP7-208ENST00000569637 SMARCA2P51531 1590 aa28.29■■■□□ 2.12
NIP7-208ENST00000569637 ATAD2BQ9ULI0 1458 aa28.27■■■□□ 2.12
NIP7-208ENST00000569637 HMGXB3Q12766 1538 aa28.21■■■□□ 2.11
NIP7-208ENST00000569637 PEG3Q9GZU2 1588 aa28.15■■■□□ 2.1
NIP7-208ENST00000569637 MROH2BQ7Z745 1585 aa28.09■■■□□ 2.09
NIP7-208ENST00000569637 BAZ1BQ9UIG0 1483 aaKnown RBP28.06■■■□□ 2.08
NIP7-208ENST00000569637 WIZO95785 1651 aa27.84■■■□□ 2.05
NIP7-208ENST00000569637 ERCC6Q03468 1493 aa27.75■■■□□ 2.03
NIP7-208ENST00000569637 NESP48681 1621 aa27.7■■■□□ 2.03
NIP7-208ENST00000569637 LAMC3Q9Y6N6 1575 aa27.68■■■□□ 2.02
NIP7-208ENST00000569637 RSF1Q96T23 1441 aaPredicted RBP27.64■■■□□ 2.02
NIP7-208ENST00000569637 CUX2O14529 1486 aa27.57■■■□□ 2
NIP7-208ENST00000569637 TOP2AP11388 1531 aaKnown RBP27.52■■■□□ 2
NIP7-208ENST00000569637 KIF21AQ7Z4S6 1674 aa27.49■■□□□ 1.99
NIP7-208ENST00000569637 THOC2Q8NI27 1593 aaKnown RBP27.44■■□□□ 1.98
NIP7-208ENST00000569637 PDS5BQ9NTI5 1447 aa27.44■■□□□ 1.98
NIP7-208ENST00000569637 CADPSQ9ULU8 1353 aa27.44■■□□□ 1.98
NIP7-208ENST00000569637 CFTRP13569 1480 aa27.25■■□□□ 1.95
NIP7-208ENST00000569637 PRDM2Q13029 1718 aa27.21■■□□□ 1.95
NIP7-208ENST00000569637 MRC2Q9UBG0 1479 aa27.19■■□□□ 1.94
NIP7-208ENST00000569637 CEP164Q9UPV0 1460 aa27.19■■□□□ 1.94
NIP7-208ENST00000569637 FANCD2Q9BXW9 1451 aa27.16■■□□□ 1.94
NIP7-208ENST00000569637 WDR62O43379 1518 aa27.14■■□□□ 1.94
NIP7-208ENST00000569637 CCDC88BA6NC98 1476 aa27.13■■□□□ 1.93
NIP7-208ENST00000569637 DNAJC5Q9H3Z4 198 aa26.97■■□□□ 1.91
NIP7-208ENST00000569637 URB2Q14146 1524 aaKnown RBP26.9■■□□□ 1.9
NIP7-208ENST00000569637 ABCC8Q09428 1581 aa26.71■■□□□ 1.87
NIP7-208ENST00000569637 TOPBP1Q92547 1522 aa26.7■■□□□ 1.87
NIP7-208ENST00000569637 DNMBPQ6XZF7 1577 aa26.69■■□□□ 1.86
NIP7-208ENST00000569637 SUPT5HO00267 1087 aaKnown RBP26.67■■□□□ 1.86
NIP7-208ENST00000569637 IFT140Q96RY7 1462 aa26.61■■□□□ 1.85
NIP7-208ENST00000569637 ZNF608Q9ULD9 1512 aaPredicted RBP26.48■■□□□ 1.83
NIP7-208ENST00000569637 TARBP1Q13395 1621 aaKnown RBP26.47■■□□□ 1.83
NIP7-208ENST00000569637 EIF4G3O43432 1585 aaKnown RBP26.46■■□□□ 1.83
NIP7-208ENST00000569637 POLA1P09884 1462 aaPredicted RBP26.45■■□□□ 1.82
NIP7-208ENST00000569637 CUX1P39880 1505 aa26.39■■□□□ 1.81
NIP7-208ENST00000569637 FGD5Q6ZNL6 1462 aa26.35■■□□□ 1.81
NIP7-208ENST00000569637 SOGA1O94964 1423 aa26.31■■□□□ 1.8
NIP7-208ENST00000569637 RAD54L2Q9Y4B4 1467 aa26.3■■□□□ 1.8
NIP7-208ENST00000569637 WDR97A6NE52 1622 aa26.3■■□□□ 1.8
NIP7-208ENST00000569637 OSCARQ8IYS5 282 aa26.29■■□□□ 1.8
NIP7-208ENST00000569637 AQRO60306 1485 aaKnown RBP eCLIP26.28■■□□□ 1.81e-8■■■□□ 17.1
NIP7-208ENST00000569637 CHD1O14646 1710 aa26.22■■□□□ 1.79
NIP7-208ENST00000569637 BIVM-ERCC5R4GMW8 1640 aa26.17■■□□□ 1.78
NIP7-208ENST00000569637 TDRD9Q8NDG6 1382 aaKnown RBP26.16■■□□□ 1.78
NIP7-208ENST00000569637 TOP2BQ02880 1626 aa26.13■■□□□ 1.77
NIP7-208ENST00000569637 PBRM1Q86U86 1689 aa26.12■■□□□ 1.77
NIP7-208ENST00000569637 WRNQ14191 1432 aaPredicted RBP eCLIP26.1■■□□□ 1.77
NIP7-208ENST00000569637 ABCA10Q8WWZ4 1543 aa26.09■■□□□ 1.77
NIP7-208ENST00000569637 SYNJ1O43426 1573 aa26.08■■□□□ 1.77
NIP7-208ENST00000569637 GRIN2BQ13224 1484 aa26.07■■□□□ 1.76
NIP7-208ENST00000569637 SNAPC4Q5SXM2 1469 aa26.07■■□□□ 1.76
NIP7-208ENST00000569637 ABCA5Q8WWZ7 1642 aa26.06■■□□□ 1.76
NIP7-208ENST00000569637 MAGI1Q96QZ7 1491 aaPredicted RBP26.05■■□□□ 1.76
NIP7-208ENST00000569637 GAPVD1Q14C86 1478 aa26.03■■□□□ 1.76
NIP7-208ENST00000569637 RIMBP3CA6NJZ7 1639 aa26.01■■□□□ 1.75
NIP7-208ENST00000569637 RIMBP3BA6NNM3 1639 aa26.01■■□□□ 1.75
NIP7-208ENST00000569637 RIMBP3Q9UFD9 1639 aa26.01■■□□□ 1.75
NIP7-208ENST00000569637 FBLN2P98095 1184 aa26■■□□□ 1.75
NIP7-208ENST00000569637 TRIM41Q8WV44 630 aa25.95■■□□□ 1.74
NIP7-208ENST00000569637 ARHGEF11O15085 1522 aa25.94■■□□□ 1.74
NIP7-208ENST00000569637 SYNJ2O15056 1496 aa25.94■■□□□ 1.74
NIP7-208ENST00000569637 CHMP7Q8WUX9 453 aaPredicted RBP25.89■■□□□ 1.74
NIP7-208ENST00000569637 CLASP1Q7Z460 1538 aa25.86■■□□□ 1.73
NIP7-208ENST00000569637 ADAMTS12P58397 1594 aa25.82■■□□□ 1.72
NIP7-208ENST00000569637 ERICH3Q5RHP9 1530 aa25.8■■□□□ 1.72
NIP7-208ENST00000569637 GRIN2AQ12879 1464 aa25.74■■□□□ 1.71
NIP7-208ENST00000569637 FHAD1B1AJZ9 1412 aa25.71■■□□□ 1.71
NIP7-208ENST00000569637 ARAP1Q96P48 1450 aa25.69■■□□□ 1.7
NIP7-208ENST00000569637 CEP170Q5SW79 1584 aa25.64■■□□□ 1.69
NIP7-208ENST00000569637 NUP160Q12769 1436 aa25.63■■□□□ 1.69
NIP7-208ENST00000569637 CYB5RLQ6IPT4 315 aa25.62■■□□□ 1.69
NIP7-208ENST00000569637 KIF27Q86VH2 1401 aa25.58■■□□□ 1.69
NIP7-208ENST00000569637 CUL7Q14999 1698 aa25.56■■□□□ 1.68
NIP7-208ENST00000569637 SHROOM2Q13796 1616 aa25.53■■□□□ 1.68
NIP7-208ENST00000569637 RUSC2Q8N2Y8 1516 aa25.46■■□□□ 1.67
NIP7-208ENST00000569637 IGF1RP08069 1367 aa25.45■■□□□ 1.67
NIP7-208ENST00000569637 ERCC6L2Q5T890 1561 aa25.44■■□□□ 1.66
NIP7-208ENST00000569637 CARMIL1Q5VZK9 1371 aa25.32■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms