RNA–Protein interactions for RNA: ENST00000562131.1

NIP7-203, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

TSL 4

Gene NIP7, Length 572 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-203ENST00000562131 NISCHQ9Y2I1 1504 aa23.5■■□□□ 1.35
NIP7-203ENST00000562131 CCDC180Q9P1Z9 1646 aa20.95■□□□□ 0.94
NIP7-203ENST00000562131 ABCC9O60706 1549 aa20.92■□□□□ 0.94
NIP7-203ENST00000562131 DCAF8L2P0C7V8 631 aa19.94■□□□□ 0.78
NIP7-203ENST00000562131 RB1CC1Q8TDY2 1594 aa19.91■□□□□ 0.78
NIP7-203ENST00000562131 NACADO15069 1562 aa19.81■□□□□ 0.76
NIP7-203ENST00000562131 PABPN1Q86U42 306 aaKnown RBP eCLIP19.56■□□□□ 0.72
NIP7-203ENST00000562131 MYO15BQ96JP2 1530 aa19.55■□□□□ 0.72
NIP7-203ENST00000562131 DNAJC5BQ9UF47 199 aa19.52■□□□□ 0.72
NIP7-203ENST00000562131 ZCCHC6Q5VYS8 1495 aaKnown RBP19.48■□□□□ 0.71
NIP7-203ENST00000562131 UNC13AQ9UPW8 1703 aa19.42■□□□□ 0.7
NIP7-203ENST00000562131 DCAF1Q9Y4B6 1507 aa19.37■□□□□ 0.69
NIP7-203ENST00000562131 BICRAQ9NZM4 1560 aa19.32■□□□□ 0.68
NIP7-203ENST00000562131 SCRIBQ14160 1630 aa19.18■□□□□ 0.66
NIP7-203ENST00000562131 SHROOM4Q9ULL8 1493 aa19.03■□□□□ 0.64
NIP7-203ENST00000562131 CC2D2AQ9P2K1 1620 aa18.86■□□□□ 0.61
NIP7-203ENST00000562131 EIF4G1Q04637 1599 aaKnown RBP18.85■□□□□ 0.61
NIP7-203ENST00000562131 CECR2Q9BXF3 1484 aa18.81■□□□□ 0.6
NIP7-203ENST00000562131 NCAPD3P42695 1498 aa18.31■□□□□ 0.52
NIP7-203ENST00000562131 ATAD2BQ9ULI0 1458 aa18.28■□□□□ 0.52
NIP7-203ENST00000562131 SMARCA4P51532 1647 aa18.27■□□□□ 0.52
NIP7-203ENST00000562131 SMARCA2P51531 1590 aa18.22■□□□□ 0.51
NIP7-203ENST00000562131 BAZ1AQ9NRL2 1556 aaPredicted RBP18.21■□□□□ 0.51
NIP7-203ENST00000562131 HMGXB3Q12766 1538 aa18.14■□□□□ 0.49
NIP7-203ENST00000562131 BAZ1BQ9UIG0 1483 aaKnown RBP18.13■□□□□ 0.49
NIP7-203ENST00000562131 MROH2BQ7Z745 1585 aa18.13■□□□□ 0.49
NIP7-203ENST00000562131 PEG3Q9GZU2 1588 aa18.07■□□□□ 0.48
NIP7-203ENST00000562131 ERCC6Q03468 1493 aa18.05■□□□□ 0.48
NIP7-203ENST00000562131 NESP48681 1621 aa18.01■□□□□ 0.47
NIP7-203ENST00000562131 WIZO95785 1651 aa17.91■□□□□ 0.46
NIP7-203ENST00000562131 CUX2O14529 1486 aa17.9■□□□□ 0.46
NIP7-203ENST00000562131 LAMC3Q9Y6N6 1575 aa17.85■□□□□ 0.45
NIP7-203ENST00000562131 RSF1Q96T23 1441 aaPredicted RBP17.82■□□□□ 0.44
NIP7-203ENST00000562131 CADPSQ9ULU8 1353 aa17.79■□□□□ 0.44
NIP7-203ENST00000562131 DNAJC5Q9H3Z4 198 aa17.79■□□□□ 0.44
NIP7-203ENST00000562131 PDS5BQ9NTI5 1447 aa17.79■□□□□ 0.44
NIP7-203ENST00000562131 KIF21AQ7Z4S6 1674 aa17.72■□□□□ 0.43
NIP7-203ENST00000562131 THOC2Q8NI27 1593 aaKnown RBP17.71■□□□□ 0.43
NIP7-203ENST00000562131 TOP2AP11388 1531 aaKnown RBP17.67■□□□□ 0.42
NIP7-203ENST00000562131 MRC2Q9UBG0 1479 aa17.6■□□□□ 0.41
NIP7-203ENST00000562131 CFTRP13569 1480 aa17.59■□□□□ 0.41
NIP7-203ENST00000562131 FANCD2Q9BXW9 1451 aa17.57■□□□□ 0.4
NIP7-203ENST00000562131 CEP164Q9UPV0 1460 aa17.57■□□□□ 0.4
NIP7-203ENST00000562131 WDR62O43379 1518 aa17.52■□□□□ 0.4
NIP7-203ENST00000562131 CCDC88BA6NC98 1476 aa17.51■□□□□ 0.39
NIP7-203ENST00000562131 URB2Q14146 1524 aaKnown RBP17.42■□□□□ 0.38
NIP7-203ENST00000562131 PRDM2Q13029 1718 aa17.35■□□□□ 0.37
NIP7-203ENST00000562131 SUPT5HO00267 1087 aaKnown RBP17.27■□□□□ 0.36
NIP7-203ENST00000562131 TOPBP1Q92547 1522 aa17.25■□□□□ 0.35
NIP7-203ENST00000562131 IFT140Q96RY7 1462 aa17.22■□□□□ 0.35
NIP7-203ENST00000562131 ABCC8Q09428 1581 aa17.22■□□□□ 0.35
NIP7-203ENST00000562131 OSCARQ8IYS5 282 aa17.21■□□□□ 0.35
NIP7-203ENST00000562131 ZNF608Q9ULD9 1512 aaPredicted RBP17.2■□□□□ 0.34
NIP7-203ENST00000562131 DNMBPQ6XZF7 1577 aa17.18■□□□□ 0.34
NIP7-203ENST00000562131 TRIM41Q8WV44 630 aa17.14■□□□□ 0.33
NIP7-203ENST00000562131 POLA1P09884 1462 aaPredicted RBP17.09■□□□□ 0.33
NIP7-203ENST00000562131 AQRO60306 1485 aaKnown RBP eCLIP17.08■□□□□ 0.322e-8■■□□□ 14.4
NIP7-203ENST00000562131 RAD54L2Q9Y4B4 1467 aa17.06■□□□□ 0.32
NIP7-203ENST00000562131 TARBP1Q13395 1621 aaKnown RBP17.06■□□□□ 0.32
NIP7-203ENST00000562131 EIF4G3O43432 1585 aaKnown RBP17.06■□□□□ 0.32
NIP7-203ENST00000562131 SOGA1O94964 1423 aa17.05■□□□□ 0.32
NIP7-203ENST00000562131 TDRD9Q8NDG6 1382 aaKnown RBP17.02■□□□□ 0.32
NIP7-203ENST00000562131 CUX1P39880 1505 aa17.01■□□□□ 0.31
NIP7-203ENST00000562131 FGD5Q6ZNL6 1462 aa17.01■□□□□ 0.31
NIP7-203ENST00000562131 FBLN2P98095 1184 aa17.01■□□□□ 0.31
NIP7-203ENST00000562131 CHD1O14646 1710 aa16.9■□□□□ 0.3
NIP7-203ENST00000562131 CHMP7Q8WUX9 453 aaPredicted RBP16.89■□□□□ 0.29
NIP7-203ENST00000562131 RIMBP3CA6NJZ7 1639 aa16.88■□□□□ 0.29
NIP7-203ENST00000562131 RIMBP3BA6NNM3 1639 aa16.88■□□□□ 0.29
NIP7-203ENST00000562131 RIMBP3Q9UFD9 1639 aa16.88■□□□□ 0.29
NIP7-203ENST00000562131 SNAPC4Q5SXM2 1469 aa16.88■□□□□ 0.29
NIP7-203ENST00000562131 GRIN2BQ13224 1484 aa16.86■□□□□ 0.29
NIP7-203ENST00000562131 ARHGEF11O15085 1522 aa16.86■□□□□ 0.29
NIP7-203ENST00000562131 WDR97A6NE52 1622 aa16.85■□□□□ 0.29
NIP7-203ENST00000562131 GAPVD1Q14C86 1478 aa16.83■□□□□ 0.28
NIP7-203ENST00000562131 CYB5RLQ6IPT4 315 aa16.83■□□□□ 0.28
NIP7-203ENST00000562131 MAGI1Q96QZ7 1491 aaPredicted RBP16.81■□□□□ 0.28
NIP7-203ENST00000562131 WRNQ14191 1432 aaPredicted RBP eCLIP16.81■□□□□ 0.28
NIP7-203ENST00000562131 ABCA10Q8WWZ4 1543 aa16.8■□□□□ 0.28
NIP7-203ENST00000562131 SYNJ2O15056 1496 aa16.78■□□□□ 0.28
NIP7-203ENST00000562131 TOP2BQ02880 1626 aa16.76■□□□□ 0.27
NIP7-203ENST00000562131 SYNJ1O43426 1573 aa16.76■□□□□ 0.27
NIP7-203ENST00000562131 PBRM1Q86U86 1689 aa16.75■□□□□ 0.27
NIP7-203ENST00000562131 ABCA5Q8WWZ7 1642 aa16.74■□□□□ 0.27
NIP7-203ENST00000562131 BIVM-ERCC5R4GMW8 1640 aa16.74■□□□□ 0.27
NIP7-203ENST00000562131 ARAP1Q96P48 1450 aa16.71■□□□□ 0.27
NIP7-203ENST00000562131 CLASP1Q7Z460 1538 aa16.7■□□□□ 0.26
NIP7-203ENST00000562131 GRIN2AQ12879 1464 aa16.62■□□□□ 0.25
NIP7-203ENST00000562131 FHAD1B1AJZ9 1412 aa16.62■□□□□ 0.25
NIP7-203ENST00000562131 ADAMTS12P58397 1594 aa16.61■□□□□ 0.25
NIP7-203ENST00000562131 TRHP20396 242 aaPredicted RBP16.61■□□□□ 0.25
NIP7-203ENST00000562131 ERICH3Q5RHP9 1530 aa16.59■□□□□ 0.25
NIP7-203ENST00000562131 NUP160Q12769 1436 aa16.55■□□□□ 0.24
NIP7-203ENST00000562131 CEP170Q5SW79 1584 aa16.55■□□□□ 0.24
NIP7-203ENST00000562131 ERCC6L2Q5T890 1561 aa16.5■□□□□ 0.23
NIP7-203ENST00000562131 KIF27Q86VH2 1401 aa16.48■□□□□ 0.23
NIP7-203ENST00000562131 JPH4Q96JJ6 628 aa16.48■□□□□ 0.23
NIP7-203ENST00000562131 IGF1RP08069 1367 aa16.48■□□□□ 0.23
NIP7-203ENST00000562131 SHROOM2Q13796 1616 aa16.43■□□□□ 0.22
NIP7-203ENST00000562131 PRG4Q92954 1404 aaPredicted RBP16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms