RNA–Protein interactions for RNA: ENST00000392386.7

CRLF1-201, Transcript of cytokine receptor like factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRLF1, Length 1,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF1-201ENST00000392386 NISCHQ9Y2I1 1504 aa55.2■■■■■ 6.43
CRLF1-201ENST00000392386 CCDC180Q9P1Z9 1646 aa48.86■■■■■ 5.41
CRLF1-201ENST00000392386 ABCC9O60706 1549 aa47.55■■■■■ 5.2
CRLF1-201ENST00000392386 DCAF8L2P0C7V8 631 aa46.09■■■■■ 4.97
CRLF1-201ENST00000392386 ZCCHC6Q5VYS8 1495 aaKnown RBP46.03■■■■■ 4.96
CRLF1-201ENST00000392386 NACADO15069 1562 aa45.88■■■■■ 4.94
CRLF1-201ENST00000392386 RB1CC1Q8TDY2 1594 aa45.85■■■■■ 4.93
CRLF1-201ENST00000392386 MYO15BQ96JP2 1530 aa45.7■■■■■ 4.91
CRLF1-201ENST00000392386 DCAF1Q9Y4B6 1507 aa45.64■■■■■ 4.9
CRLF1-201ENST00000392386 UNC13AQ9UPW8 1703 aa44.82■■■■■ 4.77
CRLF1-201ENST00000392386 SCRIBQ14160 1630 aa44.68■■■■■ 4.74
CRLF1-201ENST00000392386 PABPN1Q86U42 306 aaKnown RBP eCLIP44.54■■■■■ 4.723e-6■■■■□ 23.3
CRLF1-201ENST00000392386 BICRAQ9NZM4 1560 aa44.46■■■■■ 4.71
CRLF1-201ENST00000392386 SHROOM4Q9ULL8 1493 aa43.96■■■■■ 4.63
CRLF1-201ENST00000392386 DNAJC5BQ9UF47 199 aa43.36■■■■■ 4.53
CRLF1-201ENST00000392386 EIF4G1Q04637 1599 aaKnown RBP43.26■■■■■ 4.52
CRLF1-201ENST00000392386 CC2D2AQ9P2K1 1620 aa43■■■■■ 4.47
CRLF1-201ENST00000392386 CECR2Q9BXF3 1484 aa42.99■■■■■ 4.47
CRLF1-201ENST00000392386 SMARCA4P51532 1647 aa42.74■■■■■ 4.43
CRLF1-201ENST00000392386 BAZ1AQ9NRL2 1556 aaPredicted RBP42.74■■■■■ 4.43
CRLF1-201ENST00000392386 MROH2BQ7Z745 1585 aa42.57■■■■■ 4.4
CRLF1-201ENST00000392386 ATAD2BQ9ULI0 1458 aa42.43■■■■■ 4.38
CRLF1-201ENST00000392386 SMARCA2P51531 1590 aa42.38■■■■■ 4.38
CRLF1-201ENST00000392386 NCAPD3P42695 1498 aa42.35■■■■■ 4.37
CRLF1-201ENST00000392386 PEG3Q9GZU2 1588 aa42.29■■■■■ 4.36
CRLF1-201ENST00000392386 RSF1Q96T23 1441 aaPredicted RBP42.21■■■■■ 4.35
CRLF1-201ENST00000392386 HMGXB3Q12766 1538 aa42.15■■■■■ 4.34
CRLF1-201ENST00000392386 WIZO95785 1651 aa42.12■■■■■ 4.33
CRLF1-201ENST00000392386 BAZ1BQ9UIG0 1483 aaKnown RBP42.11■■■■■ 4.33
CRLF1-201ENST00000392386 TOP2AP11388 1531 aaKnown RBP41.67■■■■■ 4.26
CRLF1-201ENST00000392386 SUPT5HO00267 1087 aaKnown RBP41.5■■■■■ 4.23
CRLF1-201ENST00000392386 NESP48681 1621 aa41.26■■■■■ 4.2
CRLF1-201ENST00000392386 CCDC88BA6NC98 1476 aa41.22■■■■■ 4.19
CRLF1-201ENST00000392386 LAMC3Q9Y6N6 1575 aa41.16■■■■■ 4.18
CRLF1-201ENST00000392386 CADPSQ9ULU8 1353 aa41.16■■■■■ 4.18
CRLF1-201ENST00000392386 CFTRP13569 1480 aa40.97■■■■■ 4.15
CRLF1-201ENST00000392386 ERCC6Q03468 1493 aa40.95■■■■■ 4.15
CRLF1-201ENST00000392386 PDS5BQ9NTI5 1447 aa40.89■■■■■ 4.14
CRLF1-201ENST00000392386 KIF21AQ7Z4S6 1674 aa40.75■■■■■ 4.11
CRLF1-201ENST00000392386 FANCD2Q9BXW9 1451 aa40.68■■■■■ 4.1
CRLF1-201ENST00000392386 PRDM2Q13029 1718 aa40.65■■■■■ 4.1
CRLF1-201ENST00000392386 CEP164Q9UPV0 1460 aa40.58■■■■■ 4.09
CRLF1-201ENST00000392386 THOC2Q8NI27 1593 aaKnown RBP40.5■■■■■ 4.07
CRLF1-201ENST00000392386 MRC2Q9UBG0 1479 aa40.44■■■■■ 4.06
CRLF1-201ENST00000392386 CUX2O14529 1486 aa40.34■■■■■ 4.05
CRLF1-201ENST00000392386 WDR62O43379 1518 aa40.28■■■■■ 4.04
CRLF1-201ENST00000392386 URB2Q14146 1524 aaKnown RBP40.25■■■■■ 4.03
CRLF1-201ENST00000392386 TOPBP1Q92547 1522 aa40.07■■■■■ 4
CRLF1-201ENST00000392386 ABCC8Q09428 1581 aa40.06■■■■■ 4
CRLF1-201ENST00000392386 DNMBPQ6XZF7 1577 aa40.03■■■■■ 4
CRLF1-201ENST00000392386 CUX1P39880 1505 aa39.9■■■■□ 3.98
CRLF1-201ENST00000392386 WRNQ14191 1432 aaPredicted RBP eCLIP39.78■■■■□ 3.96
CRLF1-201ENST00000392386 POLA1P09884 1462 aaPredicted RBP39.75■■■■□ 3.95
CRLF1-201ENST00000392386 IFT140Q96RY7 1462 aa39.71■■■■□ 3.95
CRLF1-201ENST00000392386 FGD5Q6ZNL6 1462 aa39.71■■■■□ 3.95
CRLF1-201ENST00000392386 SYNJ1O43426 1573 aa39.66■■■■□ 3.94
CRLF1-201ENST00000392386 TOP2BQ02880 1626 aa39.64■■■■□ 3.94
CRLF1-201ENST00000392386 SOGA1O94964 1423 aa39.62■■■■□ 3.93
CRLF1-201ENST00000392386 BIVM-ERCC5R4GMW8 1640 aa39.62■■■■□ 3.93
CRLF1-201ENST00000392386 RAD54L2Q9Y4B4 1467 aa39.6■■■■□ 3.93
CRLF1-201ENST00000392386 TARBP1Q13395 1621 aaKnown RBP39.59■■■■□ 3.93
CRLF1-201ENST00000392386 ZNF608Q9ULD9 1512 aaPredicted RBP39.53■■■■□ 3.92
CRLF1-201ENST00000392386 AQRO60306 1485 aaKnown RBP eCLIP39.37■■■■□ 3.892e-7■■■□□ 16.3
CRLF1-201ENST00000392386 TDRD9Q8NDG6 1382 aaKnown RBP39.37■■■■□ 3.89
CRLF1-201ENST00000392386 EIF4G3O43432 1585 aaKnown RBP39.36■■■■□ 3.89
CRLF1-201ENST00000392386 ABCA10Q8WWZ4 1543 aa39.33■■■■□ 3.89
CRLF1-201ENST00000392386 WDR97A6NE52 1622 aa39.32■■■■□ 3.89
CRLF1-201ENST00000392386 GAPVD1Q14C86 1478 aa39.15■■■■□ 3.86
CRLF1-201ENST00000392386 TRIM41Q8WV44 630 aa39.15■■■■□ 3.86
CRLF1-201ENST00000392386 ABCA5Q8WWZ7 1642 aa39.13■■■■□ 3.85
CRLF1-201ENST00000392386 GRIN2BQ13224 1484 aa39.09■■■■□ 3.85
CRLF1-201ENST00000392386 PBRM1Q86U86 1689 aa39.02■■■■□ 3.84
CRLF1-201ENST00000392386 SNAPC4Q5SXM2 1469 aa38.99■■■■□ 3.83
CRLF1-201ENST00000392386 MAGI1Q96QZ7 1491 aaPredicted RBP38.93■■■■□ 3.82
CRLF1-201ENST00000392386 KIF27Q86VH2 1401 aa38.92■■■■□ 3.82
CRLF1-201ENST00000392386 CHIC1Q5VXU3 224 aa38.9■■■■□ 3.82
CRLF1-201ENST00000392386 FBLN2P98095 1184 aa38.87■■■■□ 3.81
CRLF1-201ENST00000392386 ERICH3Q5RHP9 1530 aa38.86■■■■□ 3.81
CRLF1-201ENST00000392386 OSCARQ8IYS5 282 aa38.81■■■■□ 3.8
CRLF1-201ENST00000392386 CHMP7Q8WUX9 453 aaPredicted RBP38.8■■■■□ 3.8
CRLF1-201ENST00000392386 CHD1O14646 1710 aa38.8■■■■□ 3.8
CRLF1-201ENST00000392386 SYNJ2O15056 1496 aa38.79■■■■□ 3.8
CRLF1-201ENST00000392386 DNAJC5Q9H3Z4 198 aa38.75■■■■□ 3.79
CRLF1-201ENST00000392386 IGF1RP08069 1367 aa38.75■■■■□ 3.79
CRLF1-201ENST00000392386 ADAMTS12P58397 1594 aa38.73■■■■□ 3.79
CRLF1-201ENST00000392386 RUSC2Q8N2Y8 1516 aa38.72■■■■□ 3.79
CRLF1-201ENST00000392386 FHAD1B1AJZ9 1412 aa38.7■■■■□ 3.79
CRLF1-201ENST00000392386 GRIN2AQ12879 1464 aa38.58■■■■□ 3.77
CRLF1-201ENST00000392386 CUL7Q14999 1698 aa38.56■■■■□ 3.76
CRLF1-201ENST00000392386 CARMIL1Q5VZK9 1371 aa38.52■■■■□ 3.76
CRLF1-201ENST00000392386 EEA1Q15075 1411 aa38.39■■■■□ 3.74
CRLF1-201ENST00000392386 NUP160Q12769 1436 aa38.38■■■■□ 3.73
CRLF1-201ENST00000392386 CEP170Q5SW79 1584 aa38.38■■■■□ 3.73
CRLF1-201ENST00000392386 CLASP1Q7Z460 1538 aa38.38■■■■□ 3.73
CRLF1-201ENST00000392386 FAM9AQ8IZU1 332 aaPredicted RBP38.36■■■■□ 3.73
CRLF1-201ENST00000392386 CSRNP3Q8WYN3 585 aa38.36■■■■□ 3.73
CRLF1-201ENST00000392386 RAPGEF2Q9Y4G8 1499 aa38.31■■■■□ 3.72
CRLF1-201ENST00000392386 PRXQ9BXM0 1461 aa38.26■■■■□ 3.72
CRLF1-201ENST00000392386 ARHGEF11O15085 1522 aa38.14■■■■□ 3.7
CRLF1-201ENST00000392386 KIAA0586Q9BVV6 1533 aa38.12■■■■□ 3.69
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms