RNA–Protein interactions for RNA: ENST00000480081.1

HACD2-204, Transcript of 3-hydroxyacyl-CoA dehydratase 2, humanhuman

TSL 4

Gene HACD2, Length 574 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HACD2-204ENST00000480081 NISCHQ9Y2I1 1504 aa28.31■■■□□ 2.12
HACD2-204ENST00000480081 AEBP2Q6ZN18 517 aaPredicted RBP27.74■■■□□ 2.03
HACD2-204ENST00000480081 CHIC1Q5VXU3 224 aa26.08■■□□□ 1.77
HACD2-204ENST00000480081 ABCC9O60706 1549 aa25.46■■□□□ 1.67
HACD2-204ENST00000480081 CCDC180Q9P1Z9 1646 aa25.06■■□□□ 1.6
HACD2-204ENST00000480081 DNAJC5BQ9UF47 199 aa24.16■■□□□ 1.46
HACD2-204ENST00000480081 RB1CC1Q8TDY2 1594 aa24■■□□□ 1.43
HACD2-204ENST00000480081 DCAF8L2P0C7V8 631 aa23.8■■□□□ 1.4
HACD2-204ENST00000480081 NACADO15069 1562 aa23.74■■□□□ 1.39
HACD2-204ENST00000480081 PABPN1Q86U42 306 aaKnown RBP eCLIP23.71■■□□□ 1.39
HACD2-204ENST00000480081 SENP3Q9H4L4 574 aaPredicted RBP23.65■■□□□ 1.38
HACD2-204ENST00000480081 ZCCHC6Q5VYS8 1495 aaKnown RBP23.6■■□□□ 1.37
HACD2-204ENST00000480081 MYO15BQ96JP2 1530 aa23.47■■□□□ 1.35
HACD2-204ENST00000480081 DCAF1Q9Y4B6 1507 aa23.42■■□□□ 1.34
HACD2-204ENST00000480081 UNC13AQ9UPW8 1703 aa23.36■■□□□ 1.33
HACD2-204ENST00000480081 PHF23Q9BUL5 403 aaPredicted RBP23.33■■□□□ 1.33
HACD2-204ENST00000480081 BICRAQ9NZM4 1560 aa23.29■■□□□ 1.32
HACD2-204ENST00000480081 CECR2Q9BXF3 1484 aa22.93■■□□□ 1.26
HACD2-204ENST00000480081 SHROOM4Q9ULL8 1493 aa22.91■■□□□ 1.26
HACD2-204ENST00000480081 SCRIBQ14160 1630 aa22.9■■□□□ 1.26
HACD2-204ENST00000480081 CC2D2AQ9P2K1 1620 aa22.9■■□□□ 1.26
HACD2-204ENST00000480081 EIF4G1Q04637 1599 aaKnown RBP22.78■■□□□ 1.24
HACD2-204ENST00000480081 DNAJC5Q9H3Z4 198 aa22.38■■□□□ 1.17
HACD2-204ENST00000480081 FOXD1Q16676 465 aa22.1■■□□□ 1.13
HACD2-204ENST00000480081 ERCC6Q03468 1493 aa22■■□□□ 1.11
HACD2-204ENST00000480081 CUX2O14529 1486 aa21.98■■□□□ 1.11
HACD2-204ENST00000480081 NCAPD3P42695 1498 aa21.95■■□□□ 1.1
HACD2-204ENST00000480081 SMARCA4P51532 1647 aa21.92■■□□□ 1.1
HACD2-204ENST00000480081 BAZ1AQ9NRL2 1556 aaPredicted RBP21.91■■□□□ 1.1
HACD2-204ENST00000480081 ATAD2BQ9ULI0 1458 aa21.87■■□□□ 1.09
HACD2-204ENST00000480081 MROH2BQ7Z745 1585 aa21.84■■□□□ 1.09
HACD2-204ENST00000480081 NESP48681 1621 aa21.76■■□□□ 1.07
HACD2-204ENST00000480081 SMARCA2P51531 1590 aa21.75■■□□□ 1.07
HACD2-204ENST00000480081 HMGXB3Q12766 1538 aa21.72■■□□□ 1.07
HACD2-204ENST00000480081 PEG3Q9GZU2 1588 aa21.7■■□□□ 1.06
HACD2-204ENST00000480081 BAZ1BQ9UIG0 1483 aaKnown RBP21.65■■□□□ 1.06
HACD2-204ENST00000480081 RSF1Q96T23 1441 aaPredicted RBP21.64■■□□□ 1.06
HACD2-204ENST00000480081 WIZO95785 1651 aa21.58■■□□□ 1.05
HACD2-204ENST00000480081 THOC2Q8NI27 1593 aaKnown RBP21.52■■□□□ 1.04
HACD2-204ENST00000480081 LAMC3Q9Y6N6 1575 aa21.48■■□□□ 1.03
HACD2-204ENST00000480081 PDS5BQ9NTI5 1447 aa21.43■■□□□ 1.02
HACD2-204ENST00000480081 TRIM41Q8WV44 630 aa21.39■■□□□ 1.01
HACD2-204ENST00000480081 KIF21AQ7Z4S6 1674 aa21.37■■□□□ 1.01
HACD2-204ENST00000480081 TOP2AP11388 1531 aaKnown RBP21.35■■□□□ 1.01
HACD2-204ENST00000480081 CADPSQ9ULU8 1353 aa21.31■■□□□ 1
HACD2-204ENST00000480081 MRC2Q9UBG0 1479 aa21.26■□□□□ 0.99
HACD2-204ENST00000480081 SUPT5HO00267 1087 aaKnown RBP21.21■□□□□ 0.99
HACD2-204ENST00000480081 WDR62O43379 1518 aa21.17■□□□□ 0.98
HACD2-204ENST00000480081 CCDC88BA6NC98 1476 aa21.13■□□□□ 0.97
HACD2-204ENST00000480081 CEP164Q9UPV0 1460 aa21.12■□□□□ 0.97
HACD2-204ENST00000480081 FANCD2Q9BXW9 1451 aa21.07■□□□□ 0.96
HACD2-204ENST00000480081 CFTRP13569 1480 aa21.04■□□□□ 0.96
HACD2-204ENST00000480081 OSCARQ8IYS5 282 aa21.02■□□□□ 0.96
HACD2-204ENST00000480081 URB2Q14146 1524 aaKnown RBP20.9■□□□□ 0.94
HACD2-204ENST00000480081 PRDM2Q13029 1718 aa20.81■□□□□ 0.92
HACD2-204ENST00000480081 MSH5O43196 834 aa20.75■□□□□ 0.91
HACD2-204ENST00000480081 ZNF608Q9ULD9 1512 aaPredicted RBP20.73■□□□□ 0.91
HACD2-204ENST00000480081 POTEDQ86YR6 584 aa20.71■□□□□ 0.91
HACD2-204ENST00000480081 RIMBP3CA6NJZ7 1639 aa20.7■□□□□ 0.9
HACD2-204ENST00000480081 RIMBP3BA6NNM3 1639 aa20.7■□□□□ 0.9
HACD2-204ENST00000480081 RIMBP3Q9UFD9 1639 aa20.7■□□□□ 0.9
HACD2-204ENST00000480081 IFT140Q96RY7 1462 aa20.69■□□□□ 0.9
HACD2-204ENST00000480081 PLPPR3Q6T4P5 718 aa20.69■□□□□ 0.9
HACD2-204ENST00000480081 ARHGEF11O15085 1522 aa20.63■□□□□ 0.89
HACD2-204ENST00000480081 TOPBP1Q92547 1522 aa20.62■□□□□ 0.89
HACD2-204ENST00000480081 CYB5RLQ6IPT4 315 aa20.59■□□□□ 0.89
HACD2-204ENST00000480081 ABCC8Q09428 1581 aa20.56■□□□□ 0.88
HACD2-204ENST00000480081 EIF4G3O43432 1585 aaKnown RBP20.54■□□□□ 0.88
HACD2-204ENST00000480081 DNMBPQ6XZF7 1577 aa20.54■□□□□ 0.88
HACD2-204ENST00000480081 FBLN2P98095 1184 aa20.53■□□□□ 0.88
HACD2-204ENST00000480081 PIAS4Q8N2W9 510 aaPredicted RBP20.53■□□□□ 0.88
HACD2-204ENST00000480081 AQRO60306 1485 aaKnown RBP eCLIP20.51■□□□□ 0.87
HACD2-204ENST00000480081 PPP6R1Q9UPN7 881 aa20.5■□□□□ 0.87
HACD2-204ENST00000480081 TRHP20396 242 aaPredicted RBP20.49■□□□□ 0.87
HACD2-204ENST00000480081 CUX1P39880 1505 aa20.47■□□□□ 0.87
HACD2-204ENST00000480081 CHD1O14646 1710 aa20.41■□□□□ 0.86
HACD2-204ENST00000480081 POLA1P09884 1462 aaPredicted RBP20.41■□□□□ 0.86
HACD2-204ENST00000480081 ARAP1Q96P48 1450 aa20.41■□□□□ 0.86
HACD2-204ENST00000480081 TARBP1Q13395 1621 aaKnown RBP20.41■□□□□ 0.86
HACD2-204ENST00000480081 WRNQ14191 1432 aaPredicted RBP eCLIP20.38■□□□□ 0.85
HACD2-204ENST00000480081 FGD5Q6ZNL6 1462 aa20.37■□□□□ 0.85
HACD2-204ENST00000480081 ADRA2BP18089 450 aa20.37■□□□□ 0.85
HACD2-204ENST00000480081 RAD54L2Q9Y4B4 1467 aa20.37■□□□□ 0.85
HACD2-204ENST00000480081 TDRD9Q8NDG6 1382 aaKnown RBP20.36■□□□□ 0.85
HACD2-204ENST00000480081 SOGA1O94964 1423 aa20.35■□□□□ 0.85
HACD2-204ENST00000480081 SYNJ1O43426 1573 aa20.31■□□□□ 0.84
HACD2-204ENST00000480081 TOP2BQ02880 1626 aa20.31■□□□□ 0.84
HACD2-204ENST00000480081 BIVM-ERCC5R4GMW8 1640 aa20.29■□□□□ 0.84
HACD2-204ENST00000480081 CHMP7Q8WUX9 453 aaPredicted RBP20.28■□□□□ 0.84
HACD2-204ENST00000480081 SNAPC4Q5SXM2 1469 aa20.28■□□□□ 0.84
HACD2-204ENST00000480081 CLASP1Q7Z460 1538 aa20.19■□□□□ 0.82
HACD2-204ENST00000480081 ABCA10Q8WWZ4 1543 aa20.18■□□□□ 0.82
HACD2-204ENST00000480081 GRIN2BQ13224 1484 aa20.16■□□□□ 0.82
HACD2-204ENST00000480081 MAGI1Q96QZ7 1491 aaPredicted RBP20.16■□□□□ 0.82
HACD2-204ENST00000480081 WDR97A6NE52 1622 aa20.16■□□□□ 0.82
HACD2-204ENST00000480081 SYNJ2O15056 1496 aa20.12■□□□□ 0.81
HACD2-204ENST00000480081 GAPVD1Q14C86 1478 aa20.09■□□□□ 0.81
HACD2-204ENST00000480081 ABCA5Q8WWZ7 1642 aa20.06■□□□□ 0.8
HACD2-204ENST00000480081 PBRM1Q86U86 1689 aa19.99■□□□□ 0.79
HACD2-204ENST00000480081 KIF27Q86VH2 1401 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms