RNA–Protein interactions for RNA: ENST00000579039.2

NCOA4-202, Transcript of nuclear receptor coactivator 4, humanhuman

TSL 2 BASIC

Gene NCOA4, Length 2,211 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOA4-202ENST00000579039 NISCHQ9Y2I1 1504 aa22.78■■□□□ 1.24
NCOA4-202ENST00000579039 CCDC180Q9P1Z9 1646 aa19.68■□□□□ 0.74
NCOA4-202ENST00000579039 ZCCHC6Q5VYS8 1495 aaKnown RBP19.15■□□□□ 0.66
NCOA4-202ENST00000579039 DCAF8L2P0C7V8 631 aa18.93■□□□□ 0.62
NCOA4-202ENST00000579039 SHROOM4Q9ULL8 1493 aa18.84■□□□□ 0.61
NCOA4-202ENST00000579039 DCAF1Q9Y4B6 1507 aa18.76■□□□□ 0.59
NCOA4-202ENST00000579039 ABCC9O60706 1549 aa18.65■□□□□ 0.58
NCOA4-202ENST00000579039 MYO15BQ96JP2 1530 aa18.47■□□□□ 0.55
NCOA4-202ENST00000579039 NACADO15069 1562 aa18.35■□□□□ 0.53
NCOA4-202ENST00000579039 SCRIBQ14160 1630 aa18.25■□□□□ 0.51
NCOA4-202ENST00000579039 SUPT5HO00267 1087 aaKnown RBP18.21■□□□□ 0.51
NCOA4-202ENST00000579039 RB1CC1Q8TDY2 1594 aa18.16■□□□□ 0.5
NCOA4-202ENST00000579039 UNC13AQ9UPW8 1703 aa17.79■□□□□ 0.44
NCOA4-202ENST00000579039 RSF1Q96T23 1441 aaPredicted RBP17.78■□□□□ 0.44
NCOA4-202ENST00000579039 CECR2Q9BXF3 1484 aa17.76■□□□□ 0.43
NCOA4-202ENST00000579039 PABPN1Q86U42 306 aaKnown RBP eCLIP17.69■□□□□ 0.42
NCOA4-202ENST00000579039 BICRAQ9NZM4 1560 aa17.65■□□□□ 0.42
NCOA4-202ENST00000579039 MROH2BQ7Z745 1585 aa17.64■□□□□ 0.41
NCOA4-202ENST00000579039 BAZ1AQ9NRL2 1556 aaPredicted RBP17.55■□□□□ 0.4
NCOA4-202ENST00000579039 WIZO95785 1651 aa17.49■□□□□ 0.39
NCOA4-202ENST00000579039 CHIC1Q5VXU3 224 aa17.47■□□□□ 0.39
NCOA4-202ENST00000579039 SMARCA4P51532 1647 aa17.45■□□□□ 0.38
NCOA4-202ENST00000579039 HRCP23327 699 aa17.32■□□□□ 0.36
NCOA4-202ENST00000579039 TOP2AP11388 1531 aaKnown RBP17.27■□□□□ 0.35
NCOA4-202ENST00000579039 PEG3Q9GZU2 1588 aa17.21■□□□□ 0.34
NCOA4-202ENST00000579039 ATAD2BQ9ULI0 1458 aa17.17■□□□□ 0.34
NCOA4-202ENST00000579039 CCDC88BA6NC98 1476 aa17.15■□□□□ 0.34
NCOA4-202ENST00000579039 PELP1Q8IZL8 1130 aaKnown RBP17.14■□□□□ 0.33
NCOA4-202ENST00000579039 SMARCA2P51531 1590 aa17.13■□□□□ 0.33
NCOA4-202ENST00000579039 EIF4G1Q04637 1599 aaKnown RBP17.11■□□□□ 0.33
NCOA4-202ENST00000579039 BAZ1BQ9UIG0 1483 aaKnown RBP17.08■□□□□ 0.32
NCOA4-202ENST00000579039 TRIM41Q8WV44 630 aa17.06■□□□□ 0.32
NCOA4-202ENST00000579039 NCAPD3P42695 1498 aa16.98■□□□□ 0.31
NCOA4-202ENST00000579039 HMGXB3Q12766 1538 aa16.92■□□□□ 0.3
NCOA4-202ENST00000579039 LOC105371045A0A1W2PR82 267 aa16.86■□□□□ 0.29
NCOA4-202ENST00000579039 ABCC8Q09428 1581 aa16.86■□□□□ 0.29
NCOA4-202ENST00000579039 CC2D2AQ9P2K1 1620 aa16.82■□□□□ 0.28
NCOA4-202ENST00000579039 FAM9AQ8IZU1 332 aaPredicted RBP16.82■□□□□ 0.28
NCOA4-202ENST00000579039 PPARGC1BQ86YN6 1023 aaKnown RBP16.75■□□□□ 0.27
NCOA4-202ENST00000579039 PCGF6Q9BYE7 350 aa16.72■□□□□ 0.27
NCOA4-202ENST00000579039 WRNQ14191 1432 aaPredicted RBP eCLIP16.71■□□□□ 0.275e-6■■□□□ 12.5
NCOA4-202ENST00000579039 CFTRP13569 1480 aa16.66■□□□□ 0.26
NCOA4-202ENST00000579039 EHMT2Q96KQ7 1210 aa16.64■□□□□ 0.25
NCOA4-202ENST00000579039 SYNJ1O43426 1573 aa16.63■□□□□ 0.25
NCOA4-202ENST00000579039 SOGA1O94964 1423 aa16.61■□□□□ 0.25
NCOA4-202ENST00000579039 MYT1Q01538 1121 aa16.6■□□□□ 0.25
NCOA4-202ENST00000579039 CADPSQ9ULU8 1353 aa16.59■□□□□ 0.25
NCOA4-202ENST00000579039 RUSC2Q8N2Y8 1516 aa16.54■□□□□ 0.24
NCOA4-202ENST00000579039 DNAJC5BQ9UF47 199 aa16.51■□□□□ 0.23
NCOA4-202ENST00000579039 TOP2BQ02880 1626 aa16.51■□□□□ 0.23
NCOA4-202ENST00000579039 EEA1Q15075 1411 aa16.5■□□□□ 0.23
NCOA4-202ENST00000579039 CSRNP3Q8WYN3 585 aa16.49■□□□□ 0.23
NCOA4-202ENST00000579039 CUX1P39880 1505 aa16.47■□□□□ 0.23
NCOA4-202ENST00000579039 BIVM-ERCC5R4GMW8 1640 aa16.46■□□□□ 0.22
NCOA4-202ENST00000579039 PRDM2Q13029 1718 aa16.45■□□□□ 0.22
NCOA4-202ENST00000579039 NESP48681 1621 aa16.43■□□□□ 0.22
NCOA4-202ENST00000579039 SCAF1Q9H7N4 1312 aaKnown RBP16.4■□□□□ 0.22
NCOA4-202ENST00000579039 FANCD2Q9BXW9 1451 aa16.4■□□□□ 0.22
NCOA4-202ENST00000579039 LAMC3Q9Y6N6 1575 aa16.33■□□□□ 0.21
NCOA4-202ENST00000579039 UBTFP17480 764 aaKnown RBP16.33■□□□□ 0.2
NCOA4-202ENST00000579039 ZEB1P37275 1124 aaPredicted RBP16.32■□□□□ 0.2
NCOA4-202ENST00000579039 GOLGA3Q08378 1498 aa16.31■□□□□ 0.2
NCOA4-202ENST00000579039 TNIKQ9UKE5 1360 aa16.31■□□□□ 0.2
NCOA4-202ENST00000579039 CEP164Q9UPV0 1460 aa16.3■□□□□ 0.2
NCOA4-202ENST00000579039 TRIM26Q12899 539 aaPredicted RBP16.29■□□□□ 0.2
NCOA4-202ENST00000579039 FGD5Q6ZNL6 1462 aa16.27■□□□□ 0.2
NCOA4-202ENST00000579039 KIF27Q86VH2 1401 aa16.27■□□□□ 0.19
NCOA4-202ENST00000579039 KIF21BO75037 1637 aa16.26■□□□□ 0.19
NCOA4-202ENST00000579039 CEP162Q5TB80 1403 aa16.25■□□□□ 0.19
NCOA4-202ENST00000579039 PDS5BQ9NTI5 1447 aa16.25■□□□□ 0.19
NCOA4-202ENST00000579039 RAPGEF2Q9Y4G8 1499 aa16.24■□□□□ 0.19
NCOA4-202ENST00000579039 TOPBP1Q92547 1522 aa16.23■□□□□ 0.19
NCOA4-202ENST00000579039 DNMBPQ6XZF7 1577 aa16.23■□□□□ 0.19
NCOA4-202ENST00000579039 CUX2O14529 1486 aa16.21■□□□□ 0.19
NCOA4-202ENST00000579039 PRXQ9BXM0 1461 aa16.2■□□□□ 0.18
NCOA4-202ENST00000579039 URB2Q14146 1524 aaKnown RBP16.19■□□□□ 0.18
NCOA4-202ENST00000579039 POLA1P09884 1462 aaPredicted RBP16.18■□□□□ 0.18
NCOA4-202ENST00000579039 RAD54L2Q9Y4B4 1467 aa16.16■□□□□ 0.18
NCOA4-202ENST00000579039 IGF1RP08069 1367 aa16.15■□□□□ 0.18
NCOA4-202ENST00000579039 KIF21AQ7Z4S6 1674 aa16.14■□□□□ 0.17
NCOA4-202ENST00000579039 ERICH3Q5RHP9 1530 aa16.13■□□□□ 0.17
NCOA4-202ENST00000579039 ABCA10Q8WWZ4 1543 aa16.1■□□□□ 0.17
NCOA4-202ENST00000579039 CLIP1P30622 1438 aa16.09■□□□□ 0.17
NCOA4-202ENST00000579039 RANGAP1P46060 587 aaPredicted RBP16.09■□□□□ 0.17
NCOA4-202ENST00000579039 CARMIL1Q5VZK9 1371 aa16.06■□□□□ 0.16
NCOA4-202ENST00000579039 ACIN1Q9UKV3 1341 aaKnown RBP16.02■□□□□ 0.16
NCOA4-202ENST00000579039 MRC2Q9UBG0 1479 aa16.02■□□□□ 0.15
NCOA4-202ENST00000579039 TDRD9Q8NDG6 1382 aaKnown RBP16.02■□□□□ 0.15
NCOA4-202ENST00000579039 WDR97A6NE52 1622 aa15.98■□□□□ 0.15
NCOA4-202ENST00000579039 VPS8Q8N3P4 1428 aa15.96■□□□□ 0.14
NCOA4-202ENST00000579039 ERCC6Q03468 1493 aa15.95■□□□□ 0.14
NCOA4-202ENST00000579039 TTBK1Q5TCY1 1321 aaPredicted RBP15.95■□□□□ 0.14
NCOA4-202ENST00000579039 GAPVD1Q14C86 1478 aa15.94■□□□□ 0.14
NCOA4-202ENST00000579039 TARBP1Q13395 1621 aaKnown RBP15.94■□□□□ 0.14
NCOA4-202ENST00000579039 ABCA5Q8WWZ7 1642 aa15.93■□□□□ 0.14
NCOA4-202ENST00000579039 WDR62O43379 1518 aa15.92■□□□□ 0.14
NCOA4-202ENST00000579039 ARAP1Q96P48 1450 aa15.9■□□□□ 0.14
NCOA4-202ENST00000579039 CUL7Q14999 1698 aa15.89■□□□□ 0.14
NCOA4-202ENST00000579039 NEUROD1Q13562 356 aa15.88■□□□□ 0.13
NCOA4-202ENST00000579039 ARHGAP35Q9NRY4 1499 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms