RNA–Protein interactions for RNA: ENST00000549049.5

SLC38A1-206, Transcript of solute carrier family 38 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC38A1, Length 3,196 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-206ENST00000549049 NISCHQ9Y2I1 1504 aa24.43■■□□□ 1.5
SLC38A1-206ENST00000549049 SHROOM4Q9ULL8 1493 aa21.85■■□□□ 1.09
SLC38A1-206ENST00000549049 SUPT5HO00267 1087 aaKnown RBP21.58■■□□□ 1.05
SLC38A1-206ENST00000549049 DCAF8L2P0C7V8 631 aa21.29■■□□□ 1
SLC38A1-206ENST00000549049 CHIC1Q5VXU3 224 aa20.71■□□□□ 0.91
SLC38A1-206ENST00000549049 PCGF6Q9BYE7 350 aa20.62■□□□□ 0.89
SLC38A1-206ENST00000549049 ZCCHC6Q5VYS8 1495 aaKnown RBP20.61■□□□□ 0.89
SLC38A1-206ENST00000549049 MYO15BQ96JP2 1530 aa20.59■□□□□ 0.89
SLC38A1-206ENST00000549049 HRCP23327 699 aa20.44■□□□□ 0.86
SLC38A1-206ENST00000549049 LOC105371045A0A1W2PR82 267 aa20.43■□□□□ 0.86
SLC38A1-206ENST00000549049 PPARGC1BQ86YN6 1023 aaKnown RBP20.39■□□□□ 0.85
SLC38A1-206ENST00000549049 CCDC180Q9P1Z9 1646 aa20.23■□□□□ 0.83
SLC38A1-206ENST00000549049 EHMT2Q96KQ7 1210 aa20.21■□□□□ 0.83
SLC38A1-206ENST00000549049 FAM9AQ8IZU1 332 aaPredicted RBP20.08■□□□□ 0.81
SLC38A1-206ENST00000549049 TRIM41Q8WV44 630 aa19.85■□□□□ 0.77
SLC38A1-206ENST00000549049 TRIM26Q12899 539 aaPredicted RBP19.83■□□□□ 0.76
SLC38A1-206ENST00000549049 DCAF1Q9Y4B6 1507 aa19.75■□□□□ 0.75
SLC38A1-206ENST00000549049 SCRIBQ14160 1630 aa19.64■□□□□ 0.73
SLC38A1-206ENST00000549049 RSF1Q96T23 1441 aaPredicted RBP19.59■□□□□ 0.73
SLC38A1-206ENST00000549049 TTBK1Q5TCY1 1321 aaPredicted RBP19.54■□□□□ 0.72
SLC38A1-206ENST00000549049 ABCC9O60706 1549 aa19.44■□□□□ 0.7
SLC38A1-206ENST00000549049 RB1CC1Q8TDY2 1594 aa19.4■□□□□ 0.7
SLC38A1-206ENST00000549049 ZEB1P37275 1124 aaPredicted RBP19.36■□□□□ 0.69
SLC38A1-206ENST00000549049 CECR2Q9BXF3 1484 aa19.34■□□□□ 0.69
SLC38A1-206ENST00000549049 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.34■□□□□ 0.69
SLC38A1-206ENST00000549049 CCER1Q8TC90 406 aaPredicted RBP19.24■□□□□ 0.67
SLC38A1-206ENST00000549049 MROH2BQ7Z745 1585 aa19.17■□□□□ 0.66
SLC38A1-206ENST00000549049 SCAF1Q9H7N4 1312 aaKnown RBP19.12■□□□□ 0.65
SLC38A1-206ENST00000549049 WIZO95785 1651 aa19.04■□□□□ 0.64
SLC38A1-206ENST00000549049 UBTFP17480 764 aaKnown RBP19.01■□□□□ 0.63
SLC38A1-206ENST00000549049 RANGAP1P46060 587 aaPredicted RBP18.97■□□□□ 0.63
SLC38A1-206ENST00000549049 PABPN1Q86U42 306 aaKnown RBP eCLIP18.92■□□□□ 0.62
SLC38A1-206ENST00000549049 ABCC8Q09428 1581 aa18.88■□□□□ 0.61
SLC38A1-206ENST00000549049 DIEXFQ68CQ4 756 aaKnown RBP18.87■□□□□ 0.61
SLC38A1-206ENST00000549049 NEUROD1Q13562 356 aa18.87■□□□□ 0.61
SLC38A1-206ENST00000549049 NACADO15069 1562 aa18.87■□□□□ 0.61
SLC38A1-206ENST00000549049 CCDC88BA6NC98 1476 aa18.84■□□□□ 0.61
SLC38A1-206ENST00000549049 HNRNPUL2Q1KMD3 747 aaKnown RBP18.82■□□□□ 0.6
SLC38A1-206ENST00000549049 SOGA1O94964 1423 aa18.82■□□□□ 0.6
SLC38A1-206ENST00000549049 YTHDC1Q96MU7 727 aaKnown RBP18.81■□□□□ 0.6
SLC38A1-206ENST00000549049 ACIN1Q9UKV3 1341 aaKnown RBP18.78■□□□□ 0.6
SLC38A1-206ENST00000549049 CSRNP3Q8WYN3 585 aa18.77■□□□□ 0.6
SLC38A1-206ENST00000549049 GTF3C3Q9Y5Q9 886 aa18.75■□□□□ 0.59
SLC38A1-206ENST00000549049 CEP162Q5TB80 1403 aa18.74■□□□□ 0.59
SLC38A1-206ENST00000549049 RUSC2Q8N2Y8 1516 aa18.72■□□□□ 0.59
SLC38A1-206ENST00000549049 BAZ1AQ9NRL2 1556 aaPredicted RBP18.69■□□□□ 0.58
SLC38A1-206ENST00000549049 CENPBP07199 599 aaPredicted RBP18.66■□□□□ 0.58
SLC38A1-206ENST00000549049 PELP1Q8IZL8 1130 aaKnown RBP18.64■□□□□ 0.57
SLC38A1-206ENST00000549049 APLP2Q06481 763 aa18.58■□□□□ 0.56
SLC38A1-206ENST00000549049 ZNF316A6NFI3 1004 aaPredicted RBP18.57■□□□□ 0.56
SLC38A1-206ENST00000549049 TNIKQ9UKE5 1360 aa18.57■□□□□ 0.56
SLC38A1-206ENST00000549049 TOP2AP11388 1531 aaKnown RBP18.54■□□□□ 0.56
SLC38A1-206ENST00000549049 SMARCA2P51531 1590 aa18.52■□□□□ 0.55
SLC38A1-206ENST00000549049 EIF4G1Q04637 1599 aaKnown RBP18.5■□□□□ 0.55
SLC38A1-206ENST00000549049 SMARCA4P51532 1647 aa18.5■□□□□ 0.55
SLC38A1-206ENST00000549049 MIER1Q8N108 512 aa18.49■□□□□ 0.55
SLC38A1-206ENST00000549049 WRNQ14191 1432 aaPredicted RBP eCLIP18.48■□□□□ 0.55
SLC38A1-206ENST00000549049 GOLGA3Q08378 1498 aa18.41■□□□□ 0.54
SLC38A1-206ENST00000549049 CLIP1P30622 1438 aa18.38■□□□□ 0.53
SLC38A1-206ENST00000549049 ITGAEP38570 1179 aa18.38■□□□□ 0.53
SLC38A1-206ENST00000549049 EEA1Q15075 1411 aa18.34■□□□□ 0.53
SLC38A1-206ENST00000549049 RAPGEF2Q9Y4G8 1499 aa18.26■□□□□ 0.51
SLC38A1-206ENST00000549049 CEP164Q9UPV0 1460 aa18.25■□□□□ 0.51
SLC38A1-206ENST00000549049 SYNJ1O43426 1573 aa18.23■□□□□ 0.51
SLC38A1-206ENST00000549049 UNC13AQ9UPW8 1703 aa18.22■□□□□ 0.51
SLC38A1-206ENST00000549049 KANK4Q5T7N3 995 aaPredicted RBP18.21■□□□□ 0.51
SLC38A1-206ENST00000549049 VPS8Q8N3P4 1428 aa18.18■□□□□ 0.5
SLC38A1-206ENST00000549049 BAZ1BQ9UIG0 1483 aaKnown RBP18.15■□□□□ 0.5
SLC38A1-206ENST00000549049 ATP1B4Q9UN42 357 aaPredicted RBP18.14■□□□□ 0.49
SLC38A1-206ENST00000549049 ATAD2BQ9ULI0 1458 aa18.12■□□□□ 0.49
SLC38A1-206ENST00000549049 BICRAQ9NZM4 1560 aa18.11■□□□□ 0.49
SLC38A1-206ENST00000549049 KIF21BO75037 1637 aa18.04■□□□□ 0.48
SLC38A1-206ENST00000549049 P3H3Q8IVL6 736 aa18.03■□□□□ 0.48
SLC38A1-206ENST00000549049 DHX57Q6P158 1386 aaKnown RBP18■□□□□ 0.47
SLC38A1-206ENST00000549049 KCNH8Q96L42 1107 aa17.97■□□□□ 0.47
SLC38A1-206ENST00000549049 FAM50AQ14320 339 aaKnown RBP17.95■□□□□ 0.46
SLC38A1-206ENST00000549049 HIRIP3Q9BW71 556 aaPredicted RBP17.95■□□□□ 0.46
SLC38A1-206ENST00000549049 BCANQ96GW7 911 aa17.93■□□□□ 0.46
SLC38A1-206ENST00000549049 ARAP1Q96P48 1450 aa17.9■□□□□ 0.46
SLC38A1-206ENST00000549049 SIN3AQ96ST3 1273 aa17.89■□□□□ 0.45
SLC38A1-206ENST00000549049 DDX10Q13206 875 aaKnown RBP17.86■□□□□ 0.45
SLC38A1-206ENST00000549049 SUPT16HQ9Y5B9 1047 aaKnown RBP17.86■□□□□ 0.45
SLC38A1-206ENST00000549049 PEG3Q9GZU2 1588 aa17.86■□□□□ 0.45
SLC38A1-206ENST00000549049 CCNB3Q8WWL7 1395 aa17.84■□□□□ 0.45
SLC38A1-206ENST00000549049 KIF27Q86VH2 1401 aa17.84■□□□□ 0.45
SLC38A1-206ENST00000549049 PRXQ9BXM0 1461 aa17.82■□□□□ 0.44
SLC38A1-206ENST00000549049 TOP2BQ02880 1626 aa17.81■□□□□ 0.44
SLC38A1-206ENST00000549049 CLSPNQ9HAW4 1339 aa17.78■□□□□ 0.44
SLC38A1-206ENST00000549049 RAB3GAP2Q9H2M9 1393 aa17.78■□□□□ 0.44
SLC38A1-206ENST00000549049 CUX1P39880 1505 aa17.77■□□□□ 0.43
SLC38A1-206ENST00000549049 CUX2O14529 1486 aa17.73■□□□□ 0.43
SLC38A1-206ENST00000549049 ARHGAP35Q9NRY4 1499 aa17.73■□□□□ 0.43
SLC38A1-206ENST00000549049 TRIM52Q96A61 297 aa17.71■□□□□ 0.43
SLC38A1-206ENST00000549049 RRBP1Q9P2E9 1410 aaKnown RBP17.69■□□□□ 0.42
SLC38A1-206ENST00000549049 FKBP8Q14318 412 aa17.69■□□□□ 0.42
SLC38A1-206ENST00000549049 IGF1RP08069 1367 aa17.67■□□□□ 0.42
SLC38A1-206ENST00000549049 ERICH3Q5RHP9 1530 aa17.67■□□□□ 0.42
SLC38A1-206ENST00000549049 CARMIL1Q5VZK9 1371 aa17.67■□□□□ 0.42
SLC38A1-206ENST00000549049 PHLDB1Q86UU1 1377 aa17.64■□□□□ 0.41
SLC38A1-206ENST00000549049 TSHZ2Q9NRE2 1034 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms