RNA–Protein interactions for RNA: ENST00000278865.7

MS4A3-201, Transcript of membrane spanning 4-domains A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MS4A3, Length 1,613 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A3-201ENST00000278865 AEBP2Q6ZN18 517 aaPredicted RBP30.58■■■□□ 2.49
MS4A3-201ENST00000278865 CHIC1Q5VXU3 224 aa29.91■■■□□ 2.38
MS4A3-201ENST00000278865 PHF23Q9BUL5 403 aaPredicted RBP26.41■■□□□ 1.82
MS4A3-201ENST00000278865 SENP3Q9H4L4 574 aaPredicted RBP25.78■■□□□ 1.72
MS4A3-201ENST00000278865 PLPPR3Q6T4P5 718 aa24.31■■□□□ 1.48
MS4A3-201ENST00000278865 FOXD1Q16676 465 aa24■■□□□ 1.43
MS4A3-201ENST00000278865 PPP6R1Q9UPN7 881 aa23.26■■□□□ 1.31
MS4A3-201ENST00000278865 ADRA2BP18089 450 aa23.22■■□□□ 1.31
MS4A3-201ENST00000278865 PIAS4Q8N2W9 510 aaPredicted RBP22.64■■□□□ 1.21
MS4A3-201ENST00000278865 MSH5O43196 834 aa21.95■■□□□ 1.1
MS4A3-201ENST00000278865 PPP4R3CPQ6ZMV5 832 aa21.48■■□□□ 1.03
MS4A3-201ENST00000278865 KCNA4P22459 653 aa21.23■□□□□ 0.99
MS4A3-201ENST00000278865 SCAF1Q9H7N4 1312 aaKnown RBP21.06■□□□□ 0.96
MS4A3-201ENST00000278865 MAPK8IP2Q13387 824 aaPredicted RBP21.05■□□□□ 0.96
MS4A3-201ENST00000278865 NCBP3Q53F19 620 aaKnown RBP20.86■□□□□ 0.93
MS4A3-201ENST00000278865 CNKSR2Q8WXI2 1034 aa20.81■□□□□ 0.92
MS4A3-201ENST00000278865 NPM3O75607 178 aaKnown RBP20.69■□□□□ 0.9
MS4A3-201ENST00000278865 DMRT2Q9Y5R5 561 aa20.64■□□□□ 0.89
MS4A3-201ENST00000278865 RNF216Q9NWF9 866 aaPredicted RBP20.36■□□□□ 0.85
MS4A3-201ENST00000278865 HOXD11P31277 338 aaPredicted RBP20.27■□□□□ 0.83
MS4A3-201ENST00000278865 SLC4A1APQ9BWU0 796 aaKnown RBP20.17■□□□□ 0.82
MS4A3-201ENST00000278865 DNAJC5BQ9UF47 199 aa19.98■□□□□ 0.79
MS4A3-201ENST00000278865 EHMT2Q96KQ7 1210 aa19.84■□□□□ 0.77
MS4A3-201ENST00000278865 POTEDQ86YR6 584 aa19.83■□□□□ 0.76
MS4A3-201ENST00000278865 DCAF8L1A6NGE4 600 aa19.74■□□□□ 0.75
MS4A3-201ENST00000278865 ZBTB22O15209 634 aa19.59■□□□□ 0.73
MS4A3-201ENST00000278865 CSRNP3Q8WYN3 585 aa19.54■□□□□ 0.72
MS4A3-201ENST00000278865 SLC4A2P04920 1241 aa19.54■□□□□ 0.72
MS4A3-201ENST00000278865 FOXD4L1Q9NU39 408 aa19.41■□□□□ 0.7
MS4A3-201ENST00000278865 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.29■□□□□ 0.68
MS4A3-201ENST00000278865 U3KPZ7 1027 aaPredicted RBP19.07■□□□□ 0.64
MS4A3-201ENST00000278865 MYCNP04198 464 aaPredicted RBP19.05■□□□□ 0.64
MS4A3-201ENST00000278865 RNF39Q9H2S5 420 aa18.9■□□□□ 0.62
MS4A3-201ENST00000278865 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.71■□□□□ 0.59
MS4A3-201ENST00000278865 HNRNPUL2Q1KMD3 747 aaKnown RBP18.71■□□□□ 0.59
MS4A3-201ENST00000278865 SAMD1Q6SPF0 538 aaPredicted RBP18.7■□□□□ 0.58
MS4A3-201ENST00000278865 ATF5Q9Y2D1 282 aaPredicted RBP18.67■□□□□ 0.58
MS4A3-201ENST00000278865 ATXN8OSP0DMR3 200 aa18.66■□□□□ 0.58
MS4A3-201ENST00000278865 C1QBPQ07021 282 aaKnown RBP18.61■□□□□ 0.57
MS4A3-201ENST00000278865 SPINK5Q9NQ38 1064 aaPredicted RBP18.52■□□□□ 0.56
MS4A3-201ENST00000278865 APLP2Q06481 763 aa18.44■□□□□ 0.54
MS4A3-201ENST00000278865 CAPN15O75808 1086 aa18.36■□□□□ 0.53
MS4A3-201ENST00000278865 TRHP20396 242 aaPredicted RBP18.33■□□□□ 0.52
MS4A3-201ENST00000278865 ZNF219Q9P2Y4 722 aaPredicted RBP18.27■□□□□ 0.51
MS4A3-201ENST00000278865 CACNB1Q02641 598 aaPredicted RBP18.26■□□□□ 0.51
MS4A3-201ENST00000278865 ABCB7O75027 752 aa18.09■□□□□ 0.49
MS4A3-201ENST00000278865 POLA2Q14181 598 aa18.07■□□□□ 0.48
MS4A3-201ENST00000278865 DSG3P32926 999 aa18.05■□□□□ 0.48
MS4A3-201ENST00000278865 MKRN4PQ13434 485 aaPredicted RBP17.83■□□□□ 0.45
MS4A3-201ENST00000278865 FBLN2P98095 1184 aa17.69■□□□□ 0.42
MS4A3-201ENST00000278865 ZBTB12Q9Y330 459 aaPredicted RBP17.66■□□□□ 0.42
MS4A3-201ENST00000278865 FKBP8Q14318 412 aa17.63■□□□□ 0.41
MS4A3-201ENST00000278865 OSCARQ8IYS5 282 aa17.49■□□□□ 0.39
MS4A3-201ENST00000278865 SPDYE4A6NLX3 237 aa17.43■□□□□ 0.38
MS4A3-201ENST00000278865 NISCHQ9Y2I1 1504 aa17.33■□□□□ 0.37
MS4A3-201ENST00000278865 SPDYE2BA6NHP3 402 aa17.25■□□□□ 0.35
MS4A3-201ENST00000278865 SPDYE6P0CI01 402 aa17.25■□□□□ 0.35
MS4A3-201ENST00000278865 SPDYE2Q495Y8 402 aa17.25■□□□□ 0.35
MS4A3-201ENST00000278865 ZNF692Q9BU19 519 aaPredicted RBP17.24■□□□□ 0.35
MS4A3-201ENST00000278865 PROM2Q8N271 834 aa17.19■□□□□ 0.34
MS4A3-201ENST00000278865 SSUH2Q9Y2M2 353 aa17.19■□□□□ 0.34
MS4A3-201ENST00000278865 RBM42Q9BTD8 480 aaKnown RBP17.08■□□□□ 0.32
MS4A3-201ENST00000278865 PABPN1Q86U42 306 aaKnown RBP eCLIP17.04■□□□□ 0.32
MS4A3-201ENST00000278865 AKT1S1Q96B36 256 aa16.94■□□□□ 0.3
MS4A3-201ENST00000278865 FBXO3Q9UK99 471 aa16.84■□□□□ 0.29
MS4A3-201ENST00000278865 REM2Q8IYK8 340 aaPredicted RBP16.83■□□□□ 0.28
MS4A3-201ENST00000278865 VASPP50552 380 aaPredicted RBP16.7■□□□□ 0.26
MS4A3-201ENST00000278865 SPDYE1Q8NFV5 336 aaPredicted RBP16.7■□□□□ 0.26
MS4A3-201ENST00000278865 PITPNM1O00562 1244 aa16.67■□□□□ 0.26
MS4A3-201ENST00000278865 STAG3Q9UJ98 1225 aa16.67■□□□□ 0.26
MS4A3-201ENST00000278865 CLEC11AQ9Y240 323 aa16.67■□□□□ 0.26
MS4A3-201ENST00000278865 IFNLR1Q8IU57 520 aaPredicted RBP16.53■□□□□ 0.24
MS4A3-201ENST00000278865 PRR29P0C7W0 189 aa16.51■□□□□ 0.23
MS4A3-201ENST00000278865 MIER1Q8N108 512 aa16.48■□□□□ 0.23
MS4A3-201ENST00000278865 PLCD3Q8N3E9 789 aa16.48■□□□□ 0.23
MS4A3-201ENST00000278865 CHRDL2Q6WN34 429 aa16.4■□□□□ 0.22
MS4A3-201ENST00000278865 CREBZFQ9NS37 354 aa16.4■□□□□ 0.22
MS4A3-201ENST00000278865 RTN4Q9NQC3 1192 aaKnown RBP16.39■□□□□ 0.21
MS4A3-201ENST00000278865 KLHL34Q8N239 644 aa16.34■□□□□ 0.21
MS4A3-201ENST00000278865 CHADLQ6NUI6 762 aa16.31■□□□□ 0.2
MS4A3-201ENST00000278865 PLEKHG5O94827 1062 aa16.29■□□□□ 0.2
MS4A3-201ENST00000278865 FXR2P51116 673 aaKnown RBP eCLIP16.29■□□□□ 0.2
MS4A3-201ENST00000278865 MNX1P50219 401 aaPredicted RBP16.27■□□□□ 0.2
MS4A3-201ENST00000278865 AMER1Q5JTC6 1135 aaPredicted RBP16.26■□□□□ 0.19
MS4A3-201ENST00000278865 PIP4P2Q8N4L2 257 aa16.25■□□□□ 0.19
MS4A3-201ENST00000278865 PRKAR2AP13861 404 aaKnown RBP16.23■□□□□ 0.19
MS4A3-201ENST00000278865 SPOCK2Q92563 424 aa16.22■□□□□ 0.19
MS4A3-201ENST00000278865 ZBTB47Q9UFB7 747 aaPredicted RBP16.2■□□□□ 0.18
MS4A3-201ENST00000278865 SLC24A1O60721 1099 aa16.18■□□□□ 0.18
MS4A3-201ENST00000278865 FARP1Q9Y4F1 1045 aaPredicted RBP16.12■□□□□ 0.17
MS4A3-201ENST00000278865 NUBP1P53384 320 aa16.1■□□□□ 0.17
MS4A3-201ENST00000278865 ABCC9O60706 1549 aa16.09■□□□□ 0.17
MS4A3-201ENST00000278865 PKD2Q13563 968 aa16.05■□□□□ 0.16
MS4A3-201ENST00000278865 RASEFQ8IZ41 740 aa16.03■□□□□ 0.16
MS4A3-201ENST00000278865 NPM1P06748 294 aaKnown RBP eCLIP16.01■□□□□ 0.15
MS4A3-201ENST00000278865 CIZ1Q9ULV3 898 aaPredicted RBP15.97■□□□□ 0.15
MS4A3-201ENST00000278865 DCAF8Q5TAQ9 597 aa15.9■□□□□ 0.14
MS4A3-201ENST00000278865 FAM212AQ96EL1 285 aa15.9■□□□□ 0.14
MS4A3-201ENST00000278865 GSE1Q14687 1217 aa15.86■□□□□ 0.13
MS4A3-201ENST00000278865 TSPYL2Q9H2G4 693 aaPredicted RBP15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms