RNA–Protein interactions for RNA: ENST00000538956.5

SLC39A9-203, Transcript of solute carrier family 39 member 9, humanhuman

TSL 2

Gene SLC39A9, Length 1,264 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC39A9-203ENST00000538956 NISCHQ9Y2I1 1504 aa28.72■■■□□ 2.19
SLC39A9-203ENST00000538956 AEBP2Q6ZN18 517 aaPredicted RBP27.08■■□□□ 1.93
SLC39A9-203ENST00000538956 CHIC1Q5VXU3 224 aa25.86■■□□□ 1.73
SLC39A9-203ENST00000538956 CCDC180Q9P1Z9 1646 aa25.53■■□□□ 1.68
SLC39A9-203ENST00000538956 ABCC9O60706 1549 aa25.43■■□□□ 1.66
SLC39A9-203ENST00000538956 RB1CC1Q8TDY2 1594 aa24.25■■□□□ 1.47
SLC39A9-203ENST00000538956 DCAF8L2P0C7V8 631 aa24.19■■□□□ 1.46
SLC39A9-203ENST00000538956 NACADO15069 1562 aa24.17■■□□□ 1.46
SLC39A9-203ENST00000538956 MYO15BQ96JP2 1530 aa23.96■■□□□ 1.43
SLC39A9-203ENST00000538956 ZCCHC6Q5VYS8 1495 aaKnown RBP23.84■■□□□ 1.41
SLC39A9-203ENST00000538956 PABPN1Q86U42 306 aaKnown RBP eCLIP23.79■■□□□ 1.4
SLC39A9-203ENST00000538956 DNAJC5BQ9UF47 199 aa23.77■■□□□ 1.4
SLC39A9-203ENST00000538956 DCAF1Q9Y4B6 1507 aa23.74■■□□□ 1.39
SLC39A9-203ENST00000538956 UNC13AQ9UPW8 1703 aa23.61■■□□□ 1.37
SLC39A9-203ENST00000538956 BICRAQ9NZM4 1560 aa23.58■■□□□ 1.37
SLC39A9-203ENST00000538956 SCRIBQ14160 1630 aa23.33■■□□□ 1.32
SLC39A9-203ENST00000538956 SHROOM4Q9ULL8 1493 aa23.27■■□□□ 1.32
SLC39A9-203ENST00000538956 SENP3Q9H4L4 574 aaPredicted RBP22.99■■□□□ 1.27
SLC39A9-203ENST00000538956 EIF4G1Q04637 1599 aaKnown RBP22.97■■□□□ 1.27
SLC39A9-203ENST00000538956 CC2D2AQ9P2K1 1620 aa22.94■■□□□ 1.26
SLC39A9-203ENST00000538956 CECR2Q9BXF3 1484 aa22.89■■□□□ 1.25
SLC39A9-203ENST00000538956 PHF23Q9BUL5 403 aaPredicted RBP22.71■■□□□ 1.23
SLC39A9-203ENST00000538956 NCAPD3P42695 1498 aa22.39■■□□□ 1.17
SLC39A9-203ENST00000538956 ATAD2BQ9ULI0 1458 aa22.34■■□□□ 1.17
SLC39A9-203ENST00000538956 SMARCA4P51532 1647 aa22.29■■□□□ 1.16
SLC39A9-203ENST00000538956 BAZ1AQ9NRL2 1556 aaPredicted RBP22.23■■□□□ 1.15
SLC39A9-203ENST00000538956 SMARCA2P51531 1590 aa22.22■■□□□ 1.15
SLC39A9-203ENST00000538956 HMGXB3Q12766 1538 aa22.16■■□□□ 1.14
SLC39A9-203ENST00000538956 MROH2BQ7Z745 1585 aa22.14■■□□□ 1.13
SLC39A9-203ENST00000538956 PEG3Q9GZU2 1588 aa22.11■■□□□ 1.13
SLC39A9-203ENST00000538956 BAZ1BQ9UIG0 1483 aaKnown RBP22.09■■□□□ 1.13
SLC39A9-203ENST00000538956 NESP48681 1621 aa21.92■■□□□ 1.1
SLC39A9-203ENST00000538956 ERCC6Q03468 1493 aa21.9■■□□□ 1.1
SLC39A9-203ENST00000538956 WIZO95785 1651 aa21.82■■□□□ 1.08
SLC39A9-203ENST00000538956 RSF1Q96T23 1441 aaPredicted RBP21.81■■□□□ 1.08
SLC39A9-203ENST00000538956 CUX2O14529 1486 aa21.81■■□□□ 1.08
SLC39A9-203ENST00000538956 LAMC3Q9Y6N6 1575 aa21.75■■□□□ 1.07
SLC39A9-203ENST00000538956 CADPSQ9ULU8 1353 aa21.73■■□□□ 1.07
SLC39A9-203ENST00000538956 PDS5BQ9NTI5 1447 aa21.69■■□□□ 1.06
SLC39A9-203ENST00000538956 DNAJC5Q9H3Z4 198 aa21.63■■□□□ 1.05
SLC39A9-203ENST00000538956 THOC2Q8NI27 1593 aaKnown RBP21.58■■□□□ 1.05
SLC39A9-203ENST00000538956 TOP2AP11388 1531 aaKnown RBP21.57■■□□□ 1.04
SLC39A9-203ENST00000538956 KIF21AQ7Z4S6 1674 aa21.52■■□□□ 1.04
SLC39A9-203ENST00000538956 CFTRP13569 1480 aa21.51■■□□□ 1.03
SLC39A9-203ENST00000538956 MRC2Q9UBG0 1479 aa21.45■■□□□ 1.02
SLC39A9-203ENST00000538956 FOXD1Q16676 465 aa21.43■■□□□ 1.02
SLC39A9-203ENST00000538956 FANCD2Q9BXW9 1451 aa21.43■■□□□ 1.02
SLC39A9-203ENST00000538956 CEP164Q9UPV0 1460 aa21.4■■□□□ 1.02
SLC39A9-203ENST00000538956 CCDC88BA6NC98 1476 aa21.39■■□□□ 1.02
SLC39A9-203ENST00000538956 WDR62O43379 1518 aa21.37■■□□□ 1.01
SLC39A9-203ENST00000538956 URB2Q14146 1524 aaKnown RBP21.24■□□□□ 0.99
SLC39A9-203ENST00000538956 PRDM2Q13029 1718 aa21.09■□□□□ 0.97
SLC39A9-203ENST00000538956 TOPBP1Q92547 1522 aa21.04■□□□□ 0.96
SLC39A9-203ENST00000538956 SUPT5HO00267 1087 aaKnown RBP21.02■□□□□ 0.96
SLC39A9-203ENST00000538956 ABCC8Q09428 1581 aa21.02■□□□□ 0.95
SLC39A9-203ENST00000538956 IFT140Q96RY7 1462 aa21■□□□□ 0.95
SLC39A9-203ENST00000538956 ZNF608Q9ULD9 1512 aaPredicted RBP20.95■□□□□ 0.94
SLC39A9-203ENST00000538956 DNMBPQ6XZF7 1577 aa20.95■□□□□ 0.94
SLC39A9-203ENST00000538956 OSCARQ8IYS5 282 aa20.93■□□□□ 0.94
SLC39A9-203ENST00000538956 POLA1P09884 1462 aaPredicted RBP20.86■□□□□ 0.93
SLC39A9-203ENST00000538956 AQRO60306 1485 aaKnown RBP eCLIP20.81■□□□□ 0.92
SLC39A9-203ENST00000538956 TARBP1Q13395 1621 aaKnown RBP20.81■□□□□ 0.92
SLC39A9-203ENST00000538956 RAD54L2Q9Y4B4 1467 aa20.8■□□□□ 0.92
SLC39A9-203ENST00000538956 SOGA1O94964 1423 aa20.79■□□□□ 0.92
SLC39A9-203ENST00000538956 CUX1P39880 1505 aa20.78■□□□□ 0.92
SLC39A9-203ENST00000538956 EIF4G3O43432 1585 aaKnown RBP20.75■□□□□ 0.91
SLC39A9-203ENST00000538956 FGD5Q6ZNL6 1462 aa20.74■□□□□ 0.91
SLC39A9-203ENST00000538956 TDRD9Q8NDG6 1382 aaKnown RBP20.73■□□□□ 0.91
SLC39A9-203ENST00000538956 TRIM41Q8WV44 630 aa20.72■□□□□ 0.91
SLC39A9-203ENST00000538956 PLPPR3Q6T4P5 718 aa20.69■□□□□ 0.9
SLC39A9-203ENST00000538956 FBLN2P98095 1184 aa20.63■□□□□ 0.89
SLC39A9-203ENST00000538956 WDR97A6NE52 1622 aa20.58■□□□□ 0.89
SLC39A9-203ENST00000538956 SNAPC4Q5SXM2 1469 aa20.56■□□□□ 0.88
SLC39A9-203ENST00000538956 GRIN2BQ13224 1484 aa20.56■□□□□ 0.88
SLC39A9-203ENST00000538956 ABCA10Q8WWZ4 1543 aa20.54■□□□□ 0.88
SLC39A9-203ENST00000538956 CHMP7Q8WUX9 453 aaPredicted RBP20.53■□□□□ 0.88
SLC39A9-203ENST00000538956 WRNQ14191 1432 aaPredicted RBP eCLIP20.53■□□□□ 0.88
SLC39A9-203ENST00000538956 GAPVD1Q14C86 1478 aa20.52■□□□□ 0.88
SLC39A9-203ENST00000538956 MAGI1Q96QZ7 1491 aaPredicted RBP20.51■□□□□ 0.87
SLC39A9-203ENST00000538956 ARHGEF11O15085 1522 aa20.51■□□□□ 0.87
SLC39A9-203ENST00000538956 CHD1O14646 1710 aa20.5■□□□□ 0.87
SLC39A9-203ENST00000538956 RIMBP3CA6NJZ7 1639 aa20.5■□□□□ 0.87
SLC39A9-203ENST00000538956 RIMBP3BA6NNM3 1639 aa20.5■□□□□ 0.87
SLC39A9-203ENST00000538956 RIMBP3Q9UFD9 1639 aa20.5■□□□□ 0.87
SLC39A9-203ENST00000538956 TOP2BQ02880 1626 aa20.46■□□□□ 0.87
SLC39A9-203ENST00000538956 SYNJ2O15056 1496 aa20.45■□□□□ 0.86
SLC39A9-203ENST00000538956 SYNJ1O43426 1573 aa20.45■□□□□ 0.86
SLC39A9-203ENST00000538956 CYB5RLQ6IPT4 315 aa20.43■□□□□ 0.86
SLC39A9-203ENST00000538956 BIVM-ERCC5R4GMW8 1640 aa20.42■□□□□ 0.86
SLC39A9-203ENST00000538956 ABCA5Q8WWZ7 1642 aa20.42■□□□□ 0.86
SLC39A9-203ENST00000538956 CLASP1Q7Z460 1538 aa20.37■□□□□ 0.85
SLC39A9-203ENST00000538956 ARAP1Q96P48 1450 aa20.35■□□□□ 0.85
SLC39A9-203ENST00000538956 PBRM1Q86U86 1689 aa20.35■□□□□ 0.85
SLC39A9-203ENST00000538956 FHAD1B1AJZ9 1412 aa20.28■□□□□ 0.84
SLC39A9-203ENST00000538956 GRIN2AQ12879 1464 aa20.28■□□□□ 0.84
SLC39A9-203ENST00000538956 ERICH3Q5RHP9 1530 aa20.26■□□□□ 0.83
SLC39A9-203ENST00000538956 ADAMTS12P58397 1594 aa20.25■□□□□ 0.83
SLC39A9-203ENST00000538956 NUP160Q12769 1436 aa20.24■□□□□ 0.83
SLC39A9-203ENST00000538956 PPP6R1Q9UPN7 881 aa20.2■□□□□ 0.82
SLC39A9-203ENST00000538956 CEP170Q5SW79 1584 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms