RNA–Protein interactions for RNA: ENST00000415861.2

CD164-205, Transcript of CD164 molecule, humanhuman

TSL 1 (best)

Gene CD164, Length 4,963 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD164-205ENST00000415861 CHIC1Q5VXU3 224 aa9.75□□□□□ -0.85
CD164-205ENST00000415861 SLC24A1O60721 1099 aa9.51□□□□□ -0.89
CD164-205ENST00000415861 EHMT2Q96KQ7 1210 aa9.34□□□□□ -0.91
CD164-205ENST00000415861 AEBP2Q6ZN18 517 aaPredicted RBP9.12□□□□□ -0.95
CD164-205ENST00000415861 PLPPR3Q6T4P5 718 aa8.77□□□□□ -1.01
CD164-205ENST00000415861 RTN4Q9NQC3 1192 aaKnown RBP8.7□□□□□ -1.02
CD164-205ENST00000415861 PHF23Q9BUL5 403 aaPredicted RBP8.69□□□□□ -1.02
CD164-205ENST00000415861 AMER1Q5JTC6 1135 aaPredicted RBP8.57□□□□□ -1.04
CD164-205ENST00000415861 KCNA4P22459 653 aa8.49□□□□□ -1.05
CD164-205ENST00000415861 CSRNP3Q8WYN3 585 aa8.47□□□□□ -1.05
CD164-205ENST00000415861 NCBP3Q53F19 620 aaKnown RBP8.43□□□□□ -1.06
CD164-205ENST00000415861 DAXXQ9UER7 740 aaPredicted RBP8.43□□□□□ -1.06
CD164-205ENST00000415861 PRKCSHP14314 528 aaPredicted RBP8.32□□□□□ -1.08
CD164-205ENST00000415861 SLC4A1APQ9BWU0 796 aaKnown RBP8.28□□□□□ -1.08
CD164-205ENST00000415861 RANGAP1P46060 587 aaPredicted RBP8.1□□□□□ -1.11
CD164-205ENST00000415861 ARXQ96QS3 562 aa8.05□□□□□ -1.12
CD164-205ENST00000415861 TULP1O00294 542 aaPredicted RBP8.04□□□□□ -1.12
CD164-205ENST00000415861 BCANQ96GW7 911 aa8.04□□□□□ -1.12
CD164-205ENST00000415861 TAOK2Q9UL54 1235 aa8.03□□□□□ -1.12
CD164-205ENST00000415861 TIMELESSQ9UNS1 1208 aa8.02□□□□□ -1.12
CD164-205ENST00000415861 TPRNQ4KMQ1 711 aa8.02□□□□□ -1.13
CD164-205ENST00000415861 HAP1P54257 671 aaPredicted RBP8.01□□□□□ -1.13
CD164-205ENST00000415861 ADRA2BP18089 450 aa7.94□□□□□ -1.14
CD164-205ENST00000415861 HOMEZQ8IX15 550 aa7.93□□□□□ -1.14
CD164-205ENST00000415861 PELP1Q8IZL8 1130 aaKnown RBP7.93□□□□□ -1.14
CD164-205ENST00000415861 ERICH6Q7L0X2 663 aa7.89□□□□□ -1.15
CD164-205ENST00000415861 PLCB2Q00722 1185 aa7.86□□□□□ -1.15
CD164-205ENST00000415861 DCAF8L2P0C7V8 631 aa7.86□□□□□ -1.15
CD164-205ENST00000415861 TTBK1Q5TCY1 1321 aaPredicted RBP7.85□□□□□ -1.15
CD164-205ENST00000415861 MYT1Q01538 1121 aa7.84□□□□□ -1.15
CD164-205ENST00000415861 PODXL2Q9NZ53 605 aa7.8□□□□□ -1.16
CD164-205ENST00000415861 FKBP8Q14318 412 aa7.79□□□□□ -1.16
CD164-205ENST00000415861 GTF3C3Q9Y5Q9 886 aa7.78□□□□□ -1.16
CD164-205ENST00000415861 ZBTB22O15209 634 aa7.74□□□□□ -1.17
CD164-205ENST00000415861 C14orf37Q86TY3 774 aa7.7□□□□□ -1.18
CD164-205ENST00000415861 NISCHQ9Y2I1 1504 aa7.68□□□□□ -1.18
CD164-205ENST00000415861 APLP2Q06481 763 aa7.67□□□□□ -1.18
CD164-205ENST00000415861 KLHL34Q8N239 644 aa7.62□□□□□ -1.19
CD164-205ENST00000415861 NPM2Q86SE8 214 aaKnown RBP7.6□□□□□ -1.19
CD164-205ENST00000415861 VSIG10Q8N0Z9 540 aa7.6□□□□□ -1.19
CD164-205ENST00000415861 NPM3O75607 178 aaKnown RBP7.59□□□□□ -1.19
CD164-205ENST00000415861 SENP3Q9H4L4 574 aaPredicted RBP7.59□□□□□ -1.2
CD164-205ENST00000415861 PPP4R3CPQ6ZMV5 832 aa7.56□□□□□ -1.2
CD164-205ENST00000415861 SUPT5HO00267 1087 aaKnown RBP7.55□□□□□ -1.2
CD164-205ENST00000415861 TMEM132AQ24JP5 1023 aa7.54□□□□□ -1.2
CD164-205ENST00000415861 EIF5BO60841 1220 aaKnown RBP7.5□□□□□ -1.21
CD164-205ENST00000415861 CCDC180Q9P1Z9 1646 aa7.49□□□□□ -1.21
CD164-205ENST00000415861 FOXD4L1Q9NU39 408 aa7.47□□□□□ -1.21
CD164-205ENST00000415861 FBLN2P98095 1184 aa7.47□□□□□ -1.21
CD164-205ENST00000415861 PPP6R1Q9UPN7 881 aa7.45□□□□□ -1.22
CD164-205ENST00000415861 KDM2AQ9Y2K7 1162 aa7.45□□□□□ -1.22
CD164-205ENST00000415861 NBR1Q14596 966 aa7.45□□□□□ -1.22
CD164-205ENST00000415861 CFAP44Q96MT7 982 aa7.44□□□□□ -1.22
CD164-205ENST00000415861 PAXIP1Q6ZW49 1069 aaPredicted RBP7.39□□□□□ -1.23
CD164-205ENST00000415861 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.39□□□□□ -1.23
CD164-205ENST00000415861 FBXO3Q9UK99 471 aa7.38□□□□□ -1.23
CD164-205ENST00000415861 TRIM26Q12899 539 aaPredicted RBP7.38□□□□□ -1.23
CD164-205ENST00000415861 UNC13AQ9UPW8 1703 aa7.37□□□□□ -1.23
CD164-205ENST00000415861 UBTFP17480 764 aaKnown RBP7.31□□□□□ -1.24
CD164-205ENST00000415861 ARID3AQ99856 593 aa7.26□□□□□ -1.25
CD164-205ENST00000415861 TSHZ2Q9NRE2 1034 aa7.22□□□□□ -1.25
CD164-205ENST00000415861 HRCP23327 699 aa7.18□□□□□ -1.26
CD164-205ENST00000415861 BBXQ8WY36 941 aaPredicted RBP7.16□□□□□ -1.26
CD164-205ENST00000415861 CDK11BP21127 795 aaKnown RBP7.14□□□□□ -1.27
CD164-205ENST00000415861 CDK11AQ9UQ88 783 aaPredicted RBP7.14□□□□□ -1.27
CD164-205ENST00000415861 CCDC9Q9Y3X0 531 aaKnown RBP7.13□□□□□ -1.27
CD164-205ENST00000415861 SPRYD3Q8NCJ5 442 aa7.13□□□□□ -1.27
CD164-205ENST00000415861 ZBTB7CA1YPR0 619 aa7.1□□□□□ -1.27
CD164-205ENST00000415861 PLEKHG5O94827 1062 aa7.1□□□□□ -1.27
CD164-205ENST00000415861 LOC105371045A0A1W2PR82 267 aa7.09□□□□□ -1.27
CD164-205ENST00000415861 CNKSR2Q8WXI2 1034 aa7.06□□□□□ -1.28
CD164-205ENST00000415861 NPM1P06748 294 aaKnown RBP eCLIP7.05□□□□□ -1.28
CD164-205ENST00000415861 MYO15BQ96JP2 1530 aa7.04□□□□□ -1.28
CD164-205ENST00000415861 PKD2Q13563 968 aa7.04□□□□□ -1.28
CD164-205ENST00000415861 ECM2O94769 699 aaPredicted RBP7.03□□□□□ -1.28
CD164-205ENST00000415861 HMGB1P09429 215 aaKnown RBP7.02□□□□□ -1.29
CD164-205ENST00000415861 POLR3GLQ9BT43 218 aa7.02□□□□□ -1.29
CD164-205ENST00000415861 SHROOM4Q9ULL8 1493 aa7.02□□□□□ -1.29
CD164-205ENST00000415861 VASPP50552 380 aaPredicted RBP7.01□□□□□ -1.29
CD164-205ENST00000415861 PDIA4P13667 645 aaKnown RBP6.99□□□□□ -1.29
CD164-205ENST00000415861 NEUROD2Q15784 382 aa6.99□□□□□ -1.29
CD164-205ENST00000415861 IFNLR1Q8IU57 520 aaPredicted RBP6.96□□□□□ -1.29
CD164-205ENST00000415861 FOXD1Q16676 465 aa6.96□□□□□ -1.3
CD164-205ENST00000415861 CHMP4AQ9BY43 222 aa6.96□□□□□ -1.3
CD164-205ENST00000415861 ATXN8OSP0DMR3 200 aa6.95□□□□□ -1.3
CD164-205ENST00000415861 PIAS4Q8N2W9 510 aaPredicted RBP6.95□□□□□ -1.3
CD164-205ENST00000415861 HSP90B1P14625 803 aaKnown RBP6.95□□□□□ -1.3
CD164-205ENST00000415861 CHGAP10645 457 aaKnown RBP6.94□□□□□ -1.3
CD164-205ENST00000415861 RSPH6AQ9H0K4 717 aa6.93□□□□□ -1.3
CD164-205ENST00000415861 IGSF3O75054 1194 aa6.93□□□□□ -1.3
CD164-205ENST00000415861 BICRAQ9NZM4 1560 aa6.93□□□□□ -1.3
CD164-205ENST00000415861 BRPF1P55201 1214 aaPredicted RBP6.92□□□□□ -1.3
CD164-205ENST00000415861 DCAF1Q9Y4B6 1507 aa6.92□□□□□ -1.3
CD164-205ENST00000415861 FAM9AQ8IZU1 332 aaPredicted RBP6.92□□□□□ -1.3
CD164-205ENST00000415861 TRHP20396 242 aaPredicted RBP6.9□□□□□ -1.3
CD164-205ENST00000415861 ZMYND15Q9H091 742 aa6.89□□□□□ -1.31
CD164-205ENST00000415861 ARID3CA6NKF2 412 aa6.88□□□□□ -1.31
CD164-205ENST00000415861 RAD21O60216 631 aa6.88□□□□□ -1.31
CD164-205ENST00000415861 MYCNP04198 464 aaPredicted RBP6.88□□□□□ -1.31
CD164-205ENST00000415861 KCTD17Q8N5Z5 321 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms