RNA–Protein interactions for RNA: ENST00000586057.5

TIMP2-204, Transcript of TIMP metallopeptidase inhibitor 2, humanhuman

TSL 1 (best) BASIC

Gene TIMP2, Length 3,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP2-204ENST00000586057 NISCHQ9Y2I1 1504 aa21.6■■□□□ 1.05
TIMP2-204ENST00000586057 DCAF8L2P0C7V8 631 aa18.58■□□□□ 0.57
TIMP2-204ENST00000586057 CCDC180Q9P1Z9 1646 aa18.5■□□□□ 0.55
TIMP2-204ENST00000586057 SHROOM4Q9ULL8 1493 aa18.3■□□□□ 0.52
TIMP2-204ENST00000586057 ZCCHC6Q5VYS8 1495 aaKnown RBP18.1■□□□□ 0.49
TIMP2-204ENST00000586057 ABCC9O60706 1549 aa18.01■□□□□ 0.47
TIMP2-204ENST00000586057 SUPT5HO00267 1087 aaKnown RBP17.71■□□□□ 0.43
TIMP2-204ENST00000586057 DCAF1Q9Y4B6 1507 aa17.59■□□□□ 0.41
TIMP2-204ENST00000586057 SCRIBQ14160 1630 aa17.46■□□□□ 0.39
TIMP2-204ENST00000586057 PELP1Q8IZL8 1130 aaKnown RBP17.39■□□□□ 0.37
TIMP2-204ENST00000586057 NACADO15069 1562 aa17.36■□□□□ 0.37
TIMP2-204ENST00000586057 MYO15BQ96JP2 1530 aa17.29■□□□□ 0.36
TIMP2-204ENST00000586057 RB1CC1Q8TDY2 1594 aa17.25■□□□□ 0.35
TIMP2-204ENST00000586057 HRCP23327 699 aa17.21■□□□□ 0.35
TIMP2-204ENST00000586057 PABPN1Q86U42 306 aaKnown RBP eCLIP17.21■□□□□ 0.35
TIMP2-204ENST00000586057 CECR2Q9BXF3 1484 aa16.98■□□□□ 0.31
TIMP2-204ENST00000586057 RSF1Q96T23 1441 aaPredicted RBP16.92■□□□□ 0.3
TIMP2-204ENST00000586057 MYT1Q01538 1121 aa16.89■□□□□ 0.29
TIMP2-204ENST00000586057 UNC13AQ9UPW8 1703 aa16.82■□□□□ 0.28
TIMP2-204ENST00000586057 MROH2BQ7Z745 1585 aa16.81■□□□□ 0.28
TIMP2-204ENST00000586057 PPARGC1BQ86YN6 1023 aaKnown RBP16.75■□□□□ 0.27
TIMP2-204ENST00000586057 CHIC1Q5VXU3 224 aa16.74■□□□□ 0.27
TIMP2-204ENST00000586057 BICRAQ9NZM4 1560 aa16.73■□□□□ 0.27
TIMP2-204ENST00000586057 WIZO95785 1651 aa16.66■□□□□ 0.26
TIMP2-204ENST00000586057 BAZ1AQ9NRL2 1556 aaPredicted RBP16.64■□□□□ 0.25
TIMP2-204ENST00000586057 PCGF6Q9BYE7 350 aa16.61■□□□□ 0.25
TIMP2-204ENST00000586057 SMARCA4P51532 1647 aa16.55■□□□□ 0.24
TIMP2-204ENST00000586057 SCAF1Q9H7N4 1312 aaKnown RBP16.49■□□□□ 0.23
TIMP2-204ENST00000586057 TRIM41Q8WV44 630 aa16.47■□□□□ 0.23
TIMP2-204ENST00000586057 FAM9AQ8IZU1 332 aaPredicted RBP16.44■□□□□ 0.22
TIMP2-204ENST00000586057 EHMT2Q96KQ7 1210 aa16.43■□□□□ 0.22
TIMP2-204ENST00000586057 CCDC88BA6NC98 1476 aa16.36■□□□□ 0.21
TIMP2-204ENST00000586057 ATAD2BQ9ULI0 1458 aa16.35■□□□□ 0.21
TIMP2-204ENST00000586057 TOP2AP11388 1531 aaKnown RBP16.35■□□□□ 0.21
TIMP2-204ENST00000586057 LOC105371045A0A1W2PR82 267 aa16.34■□□□□ 0.21
TIMP2-204ENST00000586057 BAZ1BQ9UIG0 1483 aaKnown RBP16.32■□□□□ 0.2
TIMP2-204ENST00000586057 EIF4G1Q04637 1599 aaKnown RBP16.29■□□□□ 0.2
TIMP2-204ENST00000586057 SMARCA2P51531 1590 aa16.24■□□□□ 0.19
TIMP2-204ENST00000586057 PEG3Q9GZU2 1588 aa16.16■□□□□ 0.18
TIMP2-204ENST00000586057 ABCC8Q09428 1581 aa16.14■□□□□ 0.17
TIMP2-204ENST00000586057 NCAPD3P42695 1498 aa16.11■□□□□ 0.17
TIMP2-204ENST00000586057 ZEB1P37275 1124 aaPredicted RBP16.08■□□□□ 0.16
TIMP2-204ENST00000586057 CC2D2AQ9P2K1 1620 aa16.06■□□□□ 0.16
TIMP2-204ENST00000586057 DNAJC5BQ9UF47 199 aa16.04■□□□□ 0.16
TIMP2-204ENST00000586057 ACIN1Q9UKV3 1341 aaKnown RBP16■□□□□ 0.15
TIMP2-204ENST00000586057 TRIM26Q12899 539 aaPredicted RBP16■□□□□ 0.15
TIMP2-204ENST00000586057 HMGXB3Q12766 1538 aa15.98■□□□□ 0.15
TIMP2-204ENST00000586057 TTBK1Q5TCY1 1321 aaPredicted RBP15.98■□□□□ 0.15
TIMP2-204ENST00000586057 WRNQ14191 1432 aaPredicted RBP eCLIP15.96■□□□□ 0.15
TIMP2-204ENST00000586057 SOGA1O94964 1423 aa15.91■□□□□ 0.14
TIMP2-204ENST00000586057 NEUROD1Q13562 356 aa15.89■□□□□ 0.13
TIMP2-204ENST00000586057 GTF3C3Q9Y5Q9 886 aa15.87■□□□□ 0.13
TIMP2-204ENST00000586057 UBTFP17480 764 aaKnown RBP15.85■□□□□ 0.13
TIMP2-204ENST00000586057 RUSC2Q8N2Y8 1516 aa15.85■□□□□ 0.13
TIMP2-204ENST00000586057 CADPSQ9ULU8 1353 aa15.84■□□□□ 0.13
TIMP2-204ENST00000586057 RANGAP1P46060 587 aaPredicted RBP15.84■□□□□ 0.13
TIMP2-204ENST00000586057 CSRNP3Q8WYN3 585 aa15.83■□□□□ 0.12
TIMP2-204ENST00000586057 CFTRP13569 1480 aa15.81■□□□□ 0.12
TIMP2-204ENST00000586057 SYNJ1O43426 1573 aa15.8■□□□□ 0.12
TIMP2-204ENST00000586057 NESP48681 1621 aa15.8■□□□□ 0.12
TIMP2-204ENST00000586057 CENPBP07199 599 aaPredicted RBP15.79■□□□□ 0.12
TIMP2-204ENST00000586057 FANCD2Q9BXW9 1451 aa15.68■□□□□ 0.1
TIMP2-204ENST00000586057 CUX1P39880 1505 aa15.67■□□□□ 0.1
TIMP2-204ENST00000586057 TOP2BQ02880 1626 aa15.61■□□□□ 0.09
TIMP2-204ENST00000586057 BCL11AQ9H165 835 aa15.61■□□□□ 0.09
TIMP2-204ENST00000586057 EEA1Q15075 1411 aa15.61■□□□□ 0.09
TIMP2-204ENST00000586057 CUX2O14529 1486 aa15.55■□□□□ 0.08
TIMP2-204ENST00000586057 FGD5Q6ZNL6 1462 aa15.54■□□□□ 0.08
TIMP2-204ENST00000586057 PDS5BQ9NTI5 1447 aa15.54■□□□□ 0.08
TIMP2-204ENST00000586057 CEP164Q9UPV0 1460 aa15.54■□□□□ 0.08
TIMP2-204ENST00000586057 KIF27Q86VH2 1401 aa15.54■□□□□ 0.08
TIMP2-204ENST00000586057 GOLGA3Q08378 1498 aa15.53■□□□□ 0.08
TIMP2-204ENST00000586057 RAD54L2Q9Y4B4 1467 aa15.52■□□□□ 0.08
TIMP2-204ENST00000586057 CEP162Q5TB80 1403 aa15.52■□□□□ 0.07
TIMP2-204ENST00000586057 RAPGEF2Q9Y4G8 1499 aa15.51■□□□□ 0.07
TIMP2-204ENST00000586057 BIVM-ERCC5R4GMW8 1640 aa15.51■□□□□ 0.07
TIMP2-204ENST00000586057 TNIKQ9UKE5 1360 aa15.5■□□□□ 0.07
TIMP2-204ENST00000586057 DIEXFQ68CQ4 756 aaKnown RBP15.48■□□□□ 0.07
TIMP2-204ENST00000586057 LAMC3Q9Y6N6 1575 aa15.48■□□□□ 0.07
TIMP2-204ENST00000586057 TOPBP1Q92547 1522 aa15.46■□□□□ 0.07
TIMP2-204ENST00000586057 TDRD9Q8NDG6 1382 aaKnown RBP15.46■□□□□ 0.07
TIMP2-204ENST00000586057 URB2Q14146 1524 aaKnown RBP15.44■□□□□ 0.06
TIMP2-204ENST00000586057 PRDM2Q13029 1718 aa15.43■□□□□ 0.06
TIMP2-204ENST00000586057 POLA1P09884 1462 aaPredicted RBP15.43■□□□□ 0.06
TIMP2-204ENST00000586057 IGF1RP08069 1367 aa15.42■□□□□ 0.06
TIMP2-204ENST00000586057 ERCC6Q03468 1493 aa15.41■□□□□ 0.06
TIMP2-204ENST00000586057 CLIP1P30622 1438 aa15.4■□□□□ 0.06
TIMP2-204ENST00000586057 DNMBPQ6XZF7 1577 aa15.4■□□□□ 0.06
TIMP2-204ENST00000586057 CARMIL1Q5VZK9 1371 aa15.39■□□□□ 0.05
TIMP2-204ENST00000586057 P3H3Q8IVL6 736 aa15.38■□□□□ 0.05
TIMP2-204ENST00000586057 KIF21AQ7Z4S6 1674 aa15.37■□□□□ 0.05
TIMP2-204ENST00000586057 APLP2Q06481 763 aa15.36■□□□□ 0.05
TIMP2-204ENST00000586057 ANP32EQ9BTT0 268 aa15.35■□□□□ 0.05
TIMP2-204ENST00000586057 PRXQ9BXM0 1461 aa15.35■□□□□ 0.05
TIMP2-204ENST00000586057 KIF21BO75037 1637 aa15.34■□□□□ 0.05
TIMP2-204ENST00000586057 ATP1B4Q9UN42 357 aaPredicted RBP15.34■□□□□ 0.05
TIMP2-204ENST00000586057 PRKCSHP14314 528 aaPredicted RBP15.31■□□□□ 0.04
TIMP2-204ENST00000586057 AQRO60306 1485 aaKnown RBP eCLIP15.28■□□□□ 0.04
TIMP2-204ENST00000586057 MRC2Q9UBG0 1479 aa15.28■□□□□ 0.04
TIMP2-204ENST00000586057 ABCA10Q8WWZ4 1543 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms