RNA–Protein interactions for RNA: ENST00000402744.8

CPE-201, Transcript of carboxypeptidase E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPE, Length 2,421 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPE-201ENST00000402744 NISCHQ9Y2I1 1504 aa47.2■■■■■ 5.15
CPE-201ENST00000402744 CCDC180Q9P1Z9 1646 aa40.47■■■■■ 4.07
CPE-201ENST00000402744 ZCCHC6Q5VYS8 1495 aaKnown RBP39.74■■■■□ 3.95
CPE-201ENST00000402744 SHROOM4Q9ULL8 1493 aa39.73■■■■□ 3.95
CPE-201ENST00000402744 DCAF8L2P0C7V8 631 aa39.57■■■■□ 3.92
CPE-201ENST00000402744 DCAF1Q9Y4B6 1507 aa38.67■■■■□ 3.78
CPE-201ENST00000402744 SUPT5HO00267 1087 aaKnown RBP38.54■■■■□ 3.76
CPE-201ENST00000402744 ABCC9O60706 1549 aa38.4■■■■□ 3.74
CPE-201ENST00000402744 SCRIBQ14160 1630 aa37.9■■■■□ 3.66
CPE-201ENST00000402744 MYO15BQ96JP2 1530 aa37.87■■■■□ 3.65
CPE-201ENST00000402744 NACADO15069 1562 aa37.67■■■■□ 3.62
CPE-201ENST00000402744 RB1CC1Q8TDY2 1594 aa37.27■■■■□ 3.56
CPE-201ENST00000402744 RSF1Q96T23 1441 aaPredicted RBP37.04■■■■□ 3.52
CPE-201ENST00000402744 CHIC1Q5VXU3 224 aa36.97■■■■□ 3.51
CPE-201ENST00000402744 CECR2Q9BXF3 1484 aa36.92■■■■□ 3.5
CPE-201ENST00000402744 MROH2BQ7Z745 1585 aa36.68■■■■□ 3.46
CPE-201ENST00000402744 UNC13AQ9UPW8 1703 aa36.62■■■■□ 3.45
CPE-201ENST00000402744 PABPN1Q86U42 306 aaKnown RBP eCLIP36.59■■■■□ 3.45
CPE-201ENST00000402744 WIZO95785 1651 aa36.42■■■■□ 3.42
CPE-201ENST00000402744 BAZ1AQ9NRL2 1556 aaPredicted RBP36.31■■■■□ 3.4
CPE-201ENST00000402744 BICRAQ9NZM4 1560 aa36.27■■■■□ 3.4
CPE-201ENST00000402744 SMARCA4P51532 1647 aa36.11■■■■□ 3.37
CPE-201ENST00000402744 TRIM41Q8WV44 630 aa35.94■■■■□ 3.34
CPE-201ENST00000402744 LOC105371045A0A1W2PR82 267 aa35.91■■■■□ 3.34
CPE-201ENST00000402744 TOP2AP11388 1531 aaKnown RBP35.82■■■■□ 3.32
CPE-201ENST00000402744 HRCP23327 699 aa35.82■■■■□ 3.32
CPE-201ENST00000402744 CCDC88BA6NC98 1476 aa35.69■■■■□ 3.3
CPE-201ENST00000402744 FAM9AQ8IZU1 332 aaPredicted RBP35.67■■■■□ 3.3
CPE-201ENST00000402744 SMARCA2P51531 1590 aa35.6■■■■□ 3.29
CPE-201ENST00000402744 PCGF6Q9BYE7 350 aa35.47■■■■□ 3.27
CPE-201ENST00000402744 EIF4G1Q04637 1599 aaKnown RBP35.46■■■■□ 3.27
CPE-201ENST00000402744 EHMT2Q96KQ7 1210 aa35.45■■■■□ 3.27
CPE-201ENST00000402744 ATAD2BQ9ULI0 1458 aa35.44■■■■□ 3.26
CPE-201ENST00000402744 PEG3Q9GZU2 1588 aa35.42■■■■□ 3.26
CPE-201ENST00000402744 ABCC8Q09428 1581 aa35.32■■■■□ 3.24
CPE-201ENST00000402744 BAZ1BQ9UIG0 1483 aaKnown RBP35.31■■■■□ 3.24
CPE-201ENST00000402744 PPARGC1BQ86YN6 1023 aaKnown RBP35.11■■■■□ 3.21
CPE-201ENST00000402744 TRIM26Q12899 539 aaPredicted RBP34.92■■■■□ 3.18
CPE-201ENST00000402744 NCAPD3P42695 1498 aa34.89■■■■□ 3.18
CPE-201ENST00000402744 SOGA1O94964 1423 aa34.83■■■■□ 3.17
CPE-201ENST00000402744 WRNQ14191 1432 aaPredicted RBP eCLIP34.83■■■■□ 3.17
CPE-201ENST00000402744 HMGXB3Q12766 1538 aa34.78■■■■□ 3.16
CPE-201ENST00000402744 RUSC2Q8N2Y8 1516 aa34.7■■■■□ 3.15
CPE-201ENST00000402744 SYNJ1O43426 1573 aa34.66■■■■□ 3.14
CPE-201ENST00000402744 CSRNP3Q8WYN3 585 aa34.55■■■■□ 3.12
CPE-201ENST00000402744 CC2D2AQ9P2K1 1620 aa34.51■■■■□ 3.12
CPE-201ENST00000402744 EEA1Q15075 1411 aa34.4■■■■□ 3.1
CPE-201ENST00000402744 UBTFP17480 764 aaKnown RBP34.39■■■■□ 3.1
CPE-201ENST00000402744 CFTRP13569 1480 aa34.37■■■■□ 3.09
CPE-201ENST00000402744 TOP2BQ02880 1626 aa34.28■■■■□ 3.08
CPE-201ENST00000402744 CEP162Q5TB80 1403 aa34.22■■■■□ 3.07
CPE-201ENST00000402744 TNIKQ9UKE5 1360 aa34.21■■■■□ 3.07
CPE-201ENST00000402744 CUX1P39880 1505 aa34.2■■■■□ 3.07
CPE-201ENST00000402744 CADPSQ9ULU8 1353 aa34.2■■■■□ 3.06
CPE-201ENST00000402744 GOLGA3Q08378 1498 aa34.17■■■■□ 3.06
CPE-201ENST00000402744 ZEB1P37275 1124 aaPredicted RBP34.15■■■■□ 3.06
CPE-201ENST00000402744 BIVM-ERCC5R4GMW8 1640 aa34.15■■■■□ 3.06
CPE-201ENST00000402744 CEP164Q9UPV0 1460 aa34.07■■■■□ 3.04
CPE-201ENST00000402744 TTBK1Q5TCY1 1321 aaPredicted RBP34.05■■■■□ 3.04
CPE-201ENST00000402744 RANGAP1P46060 587 aaPredicted RBP34.03■■■■□ 3.04
CPE-201ENST00000402744 DNAJC5BQ9UF47 199 aa34.02■■■■□ 3.04
CPE-201ENST00000402744 RAPGEF2Q9Y4G8 1499 aa34■■■■□ 3.03
CPE-201ENST00000402744 KIF21BO75037 1637 aa33.97■■■■□ 3.03
CPE-201ENST00000402744 NESP48681 1621 aa33.94■■■■□ 3.02
CPE-201ENST00000402744 PRDM2Q13029 1718 aa33.91■■■■□ 3.02
CPE-201ENST00000402744 FANCD2Q9BXW9 1451 aa33.86■■■■□ 3.01
CPE-201ENST00000402744 KIF27Q86VH2 1401 aa33.83■■■■□ 3.01
CPE-201ENST00000402744 CLIP1P30622 1438 aa33.79■■■■□ 3
CPE-201ENST00000402744 FGD5Q6ZNL6 1462 aa33.75■■■□□ 2.99
CPE-201ENST00000402744 PRXQ9BXM0 1461 aa33.73■■■□□ 2.99
CPE-201ENST00000402744 CUX2O14529 1486 aa33.72■■■□□ 2.99
CPE-201ENST00000402744 ERICH3Q5RHP9 1530 aa33.59■■■□□ 2.97
CPE-201ENST00000402744 IGF1RP08069 1367 aa33.56■■■□□ 2.96
CPE-201ENST00000402744 RAD54L2Q9Y4B4 1467 aa33.55■■■□□ 2.96
CPE-201ENST00000402744 TOPBP1Q92547 1522 aa33.53■■■□□ 2.96
CPE-201ENST00000402744 LAMC3Q9Y6N6 1575 aa33.51■■■□□ 2.96
CPE-201ENST00000402744 DNMBPQ6XZF7 1577 aa33.5■■■□□ 2.95
CPE-201ENST00000402744 VPS8Q8N3P4 1428 aa33.49■■■□□ 2.95
CPE-201ENST00000402744 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.47■■■□□ 2.95
CPE-201ENST00000402744 POLA1P09884 1462 aaPredicted RBP33.46■■■□□ 2.95
CPE-201ENST00000402744 SCAF1Q9H7N4 1312 aaKnown RBP33.44■■■□□ 2.94
CPE-201ENST00000402744 CCER1Q8TC90 406 aaPredicted RBP33.43■■■□□ 2.94
CPE-201ENST00000402744 URB2Q14146 1524 aaKnown RBP33.42■■■□□ 2.94
CPE-201ENST00000402744 CARMIL1Q5VZK9 1371 aa33.41■■■□□ 2.94
CPE-201ENST00000402744 PDS5BQ9NTI5 1447 aa33.39■■■□□ 2.94
CPE-201ENST00000402744 APLP2Q06481 763 aa33.39■■■□□ 2.94
CPE-201ENST00000402744 ARAP1Q96P48 1450 aa33.33■■■□□ 2.93
CPE-201ENST00000402744 ABCA10Q8WWZ4 1543 aa33.29■■■□□ 2.92
CPE-201ENST00000402744 KIF21AQ7Z4S6 1674 aa33.26■■■□□ 2.91
CPE-201ENST00000402744 TDRD9Q8NDG6 1382 aaKnown RBP33.23■■■□□ 2.91
CPE-201ENST00000402744 ARHGAP35Q9NRY4 1499 aa33.2■■■□□ 2.91
CPE-201ENST00000402744 PELP1Q8IZL8 1130 aaKnown RBP33.18■■■□□ 2.9
CPE-201ENST00000402744 P3H3Q8IVL6 736 aa33.11■■■□□ 2.89
CPE-201ENST00000402744 HNRNPUL2Q1KMD3 747 aaKnown RBP33.1■■■□□ 2.89
CPE-201ENST00000402744 KANK4Q5T7N3 995 aaPredicted RBP33.1■■■□□ 2.89
CPE-201ENST00000402744 WDR97A6NE52 1622 aa33■■■□□ 2.87
CPE-201ENST00000402744 GAPVD1Q14C86 1478 aa33■■■□□ 2.87
CPE-201ENST00000402744 ABCA5Q8WWZ7 1642 aa32.92■■■□□ 2.86
CPE-201ENST00000402744 MRC2Q9UBG0 1479 aa32.92■■■□□ 2.86
CPE-201ENST00000402744 CUL7Q14999 1698 aa32.91■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms