RNA–Protein interactions for RNA: ENST00000336643.9

SLC39A9-202, Transcript of solute carrier family 39 member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC39A9, Length 3,560 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC39A9-202ENST00000336643 NISCHQ9Y2I1 1504 aa21.16■□□□□ 0.98
SLC39A9-202ENST00000336643 CCDC180Q9P1Z9 1646 aa18.62■□□□□ 0.57
SLC39A9-202ENST00000336643 ZCCHC6Q5VYS8 1495 aaKnown RBP17.88■□□□□ 0.45
SLC39A9-202ENST00000336643 DCAF1Q9Y4B6 1507 aa17.7■□□□□ 0.42
SLC39A9-202ENST00000336643 MYO15BQ96JP2 1530 aa17.48■□□□□ 0.39
SLC39A9-202ENST00000336643 NACADO15069 1562 aa17.12■□□□□ 0.33
SLC39A9-202ENST00000336643 ABCC9O60706 1549 aa16.97■□□□□ 0.31
SLC39A9-202ENST00000336643 UNC13AQ9UPW8 1703 aa16.95■□□□□ 0.3
SLC39A9-202ENST00000336643 RB1CC1Q8TDY2 1594 aa16.87■□□□□ 0.29
SLC39A9-202ENST00000336643 SCRIBQ14160 1630 aa16.8■□□□□ 0.28
SLC39A9-202ENST00000336643 SHROOM4Q9ULL8 1493 aa16.73■□□□□ 0.27
SLC39A9-202ENST00000336643 BICRAQ9NZM4 1560 aa16.64■□□□□ 0.25
SLC39A9-202ENST00000336643 DCAF8L2P0C7V8 631 aa16.49■□□□□ 0.23
SLC39A9-202ENST00000336643 RSF1Q96T23 1441 aaPredicted RBP16.37■□□□□ 0.21
SLC39A9-202ENST00000336643 CECR2Q9BXF3 1484 aa16.35■□□□□ 0.21
SLC39A9-202ENST00000336643 MROH2BQ7Z745 1585 aa16.33■□□□□ 0.2
SLC39A9-202ENST00000336643 PEG3Q9GZU2 1588 aa16.29■□□□□ 0.2
SLC39A9-202ENST00000336643 SMARCA4P51532 1647 aa16.29■□□□□ 0.2
SLC39A9-202ENST00000336643 BAZ1AQ9NRL2 1556 aaPredicted RBP16.26■□□□□ 0.19
SLC39A9-202ENST00000336643 WIZO95785 1651 aa16.24■□□□□ 0.19
SLC39A9-202ENST00000336643 EIF4G1Q04637 1599 aaKnown RBP16.18■□□□□ 0.18
SLC39A9-202ENST00000336643 TOP2AP11388 1531 aaKnown RBP16.07■□□□□ 0.16
SLC39A9-202ENST00000336643 SUPT5HO00267 1087 aaKnown RBP16■□□□□ 0.15
SLC39A9-202ENST00000336643 SMARCA2P51531 1590 aa15.97■□□□□ 0.15
SLC39A9-202ENST00000336643 ATAD2BQ9ULI0 1458 aa15.89■□□□□ 0.13
SLC39A9-202ENST00000336643 HMGXB3Q12766 1538 aa15.86■□□□□ 0.13
SLC39A9-202ENST00000336643 PABPN1Q86U42 306 aaKnown RBP eCLIP15.85■□□□□ 0.13
SLC39A9-202ENST00000336643 CCDC88BA6NC98 1476 aa15.81■□□□□ 0.12
SLC39A9-202ENST00000336643 NCAPD3P42695 1498 aa15.78■□□□□ 0.12
SLC39A9-202ENST00000336643 CHIC1Q5VXU3 224 aa15.71■□□□□ 0.1
SLC39A9-202ENST00000336643 PRDM2Q13029 1718 aa15.7■□□□□ 0.1
SLC39A9-202ENST00000336643 CC2D2AQ9P2K1 1620 aa15.66■□□□□ 0.1
SLC39A9-202ENST00000336643 BAZ1BQ9UIG0 1483 aaKnown RBP15.65■□□□□ 0.1
SLC39A9-202ENST00000336643 BIVM-ERCC5R4GMW8 1640 aa15.49■□□□□ 0.07
SLC39A9-202ENST00000336643 ABCC8Q09428 1581 aa15.47■□□□□ 0.07
SLC39A9-202ENST00000336643 CFTRP13569 1480 aa15.46■□□□□ 0.07
SLC39A9-202ENST00000336643 SYNJ1O43426 1573 aa15.44■□□□□ 0.06
SLC39A9-202ENST00000336643 TOP2BQ02880 1626 aa15.4■□□□□ 0.06
SLC39A9-202ENST00000336643 CUX1P39880 1505 aa15.28■□□□□ 0.04
SLC39A9-202ENST00000336643 LAMC3Q9Y6N6 1575 aa15.25■□□□□ 0.03
SLC39A9-202ENST00000336643 WRNQ14191 1432 aaPredicted RBP eCLIP15.23■□□□□ 0.03
SLC39A9-202ENST00000336643 PCGF6Q9BYE7 350 aa15.22■□□□□ 0.03
SLC39A9-202ENST00000336643 CADPSQ9ULU8 1353 aa15.2■□□□□ 0.02
SLC39A9-202ENST00000336643 WDR97A6NE52 1622 aa15.2■□□□□ 0.02
SLC39A9-202ENST00000336643 RUSC2Q8N2Y8 1516 aa15.15■□□□□ 0.02
SLC39A9-202ENST00000336643 KIF21BO75037 1637 aa15.15■□□□□ 0.02
SLC39A9-202ENST00000336643 KIF21AQ7Z4S6 1674 aa15.14■□□□□ 0.01
SLC39A9-202ENST00000336643 HRCP23327 699 aa15.14■□□□□ 0.01
SLC39A9-202ENST00000336643 SOGA1O94964 1423 aa15.14■□□□□ 0.01
SLC39A9-202ENST00000336643 TRIM41Q8WV44 630 aa15.11■□□□□ 0.01
SLC39A9-202ENST00000336643 EEA1Q15075 1411 aa15.1■□□□□ 0.01
SLC39A9-202ENST00000336643 NESP48681 1621 aa15.1■□□□□ 0.01
SLC39A9-202ENST00000336643 DNMBPQ6XZF7 1577 aa15.09■□□□□ 0.01
SLC39A9-202ENST00000336643 DNAJC5BQ9UF47 199 aa15.08■□□□□ 0.01
SLC39A9-202ENST00000336643 LOC105371045A0A1W2PR82 267 aa15.06■□□□□ 0
SLC39A9-202ENST00000336643 FANCD2Q9BXW9 1451 aa15.05■□□□□ 0
SLC39A9-202ENST00000336643 URB2Q14146 1524 aaKnown RBP15.02□□□□□ -0.01
SLC39A9-202ENST00000336643 TOPBP1Q92547 1522 aa14.99□□□□□ -0.01
SLC39A9-202ENST00000336643 TARBP1Q13395 1621 aaKnown RBP14.99□□□□□ -0.01
SLC39A9-202ENST00000336643 ERICH3Q5RHP9 1530 aa14.99□□□□□ -0.01
SLC39A9-202ENST00000336643 PRXQ9BXM0 1461 aa14.99□□□□□ -0.01
SLC39A9-202ENST00000336643 ABCA5Q8WWZ7 1642 aa14.98□□□□□ -0.01
SLC39A9-202ENST00000336643 FGD5Q6ZNL6 1462 aa14.95□□□□□ -0.02
SLC39A9-202ENST00000336643 ABCA10Q8WWZ4 1543 aa14.94□□□□□ -0.02
SLC39A9-202ENST00000336643 THOC2Q8NI27 1593 aaKnown RBP14.94□□□□□ -0.02
SLC39A9-202ENST00000336643 WDR62O43379 1518 aa14.92□□□□□ -0.02
SLC39A9-202ENST00000336643 POLA1P09884 1462 aaPredicted RBP14.92□□□□□ -0.02
SLC39A9-202ENST00000336643 PPARGC1BQ86YN6 1023 aaKnown RBP14.91□□□□□ -0.02
SLC39A9-202ENST00000336643 CEP164Q9UPV0 1460 aa14.91□□□□□ -0.02
SLC39A9-202ENST00000336643 TNIKQ9UKE5 1360 aa14.86□□□□□ -0.03
SLC39A9-202ENST00000336643 GOLGA3Q08378 1498 aa14.86□□□□□ -0.03
SLC39A9-202ENST00000336643 RAPGEF2Q9Y4G8 1499 aa14.85□□□□□ -0.03
SLC39A9-202ENST00000336643 FAM9AQ8IZU1 332 aaPredicted RBP14.84□□□□□ -0.03
SLC39A9-202ENST00000336643 PDS5BQ9NTI5 1447 aa14.84□□□□□ -0.03
SLC39A9-202ENST00000336643 EHMT2Q96KQ7 1210 aa14.84□□□□□ -0.03
SLC39A9-202ENST00000336643 CUL7Q14999 1698 aa14.83□□□□□ -0.04
SLC39A9-202ENST00000336643 PBRM1Q86U86 1689 aa14.82□□□□□ -0.04
SLC39A9-202ENST00000336643 CUX2O14529 1486 aa14.82□□□□□ -0.04
SLC39A9-202ENST00000336643 CSRNP3Q8WYN3 585 aa14.79□□□□□ -0.04
SLC39A9-202ENST00000336643 MRC2Q9UBG0 1479 aa14.79□□□□□ -0.04
SLC39A9-202ENST00000336643 IGF1RP08069 1367 aa14.78□□□□□ -0.04
SLC39A9-202ENST00000336643 RAD54L2Q9Y4B4 1467 aa14.78□□□□□ -0.04
SLC39A9-202ENST00000336643 TRIM26Q12899 539 aaPredicted RBP14.78□□□□□ -0.04
SLC39A9-202ENST00000336643 KIF27Q86VH2 1401 aa14.77□□□□□ -0.04
SLC39A9-202ENST00000336643 CTTNBP2Q8WZ74 1663 aa14.75□□□□□ -0.05
SLC39A9-202ENST00000336643 CEP162Q5TB80 1403 aa14.74□□□□□ -0.05
SLC39A9-202ENST00000336643 ADAMTS12P58397 1594 aa14.67□□□□□ -0.06
SLC39A9-202ENST00000336643 ARAP1Q96P48 1450 aa14.67□□□□□ -0.06
SLC39A9-202ENST00000336643 SAMD9Q5K651 1589 aa14.65□□□□□ -0.06
SLC39A9-202ENST00000336643 EIF4G3O43432 1585 aaKnown RBP14.64□□□□□ -0.07
SLC39A9-202ENST00000336643 IFT140Q96RY7 1462 aa14.61□□□□□ -0.07
SLC39A9-202ENST00000336643 ARHGAP35Q9NRY4 1499 aa14.59□□□□□ -0.07
SLC39A9-202ENST00000336643 LRRIQ1Q96JM4 1722 aa14.59□□□□□ -0.07
SLC39A9-202ENST00000336643 GAPVD1Q14C86 1478 aa14.59□□□□□ -0.07
SLC39A9-202ENST00000336643 ZNF608Q9ULD9 1512 aaPredicted RBP14.56□□□□□ -0.08
SLC39A9-202ENST00000336643 CARMIL1Q5VZK9 1371 aa14.55□□□□□ -0.08
SLC39A9-202ENST00000336643 VPS8Q8N3P4 1428 aa14.54□□□□□ -0.08
SLC39A9-202ENST00000336643 CLIP1P30622 1438 aa14.53□□□□□ -0.08
SLC39A9-202ENST00000336643 CFAP43Q8NDM7 1665 aa14.52□□□□□ -0.08
SLC39A9-202ENST00000336643 ZEB1P37275 1124 aaPredicted RBP14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms