RNA–Protein interactions for RNA: ENST00000276062.8

NDUFB11-201, Transcript of NADH:ubiquinone oxidoreductase subunit B11, humanhuman

TSL 1 (best) BASIC

Gene NDUFB11, Length 948 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFB11-201ENST00000276062 NISCHQ9Y2I1 1504 aa30.77■■■□□ 2.52
NDUFB11-201ENST00000276062 ABCC9O60706 1549 aa27.12■■□□□ 1.93
NDUFB11-201ENST00000276062 CCDC180Q9P1Z9 1646 aa27.11■■□□□ 1.93
NDUFB11-201ENST00000276062 DNAJC5BQ9UF47 199 aa25.89■■□□□ 1.74
NDUFB11-201ENST00000276062 ZCCHC6Q5VYS8 1495 aaKnown RBP25.73■■□□□ 1.71
NDUFB11-201ENST00000276062 RB1CC1Q8TDY2 1594 aa25.62■■□□□ 1.69
NDUFB11-201ENST00000276062 DCAF8L2P0C7V8 631 aa25.52■■□□□ 1.68
NDUFB11-201ENST00000276062 DCAF1Q9Y4B6 1507 aa25.52■■□□□ 1.68
NDUFB11-201ENST00000276062 MYO15BQ96JP2 1530 aa25.42■■□□□ 1.66
NDUFB11-201ENST00000276062 NACADO15069 1562 aa25.36■■□□□ 1.65
NDUFB11-201ENST00000276062 UNC13AQ9UPW8 1703 aa25.2■■□□□ 1.62
NDUFB11-201ENST00000276062 PABPN1Q86U42 306 aaKnown RBP eCLIP25.09■■□□□ 1.61
NDUFB11-201ENST00000276062 BICRAQ9NZM4 1560 aa24.97■■□□□ 1.59
NDUFB11-201ENST00000276062 SCRIBQ14160 1630 aa24.74■■□□□ 1.55
NDUFB11-201ENST00000276062 SHROOM4Q9ULL8 1493 aa24.64■■□□□ 1.53
NDUFB11-201ENST00000276062 CC2D2AQ9P2K1 1620 aa24.54■■□□□ 1.52
NDUFB11-201ENST00000276062 CECR2Q9BXF3 1484 aa24.49■■□□□ 1.51
NDUFB11-201ENST00000276062 EIF4G1Q04637 1599 aaKnown RBP24.36■■□□□ 1.49
NDUFB11-201ENST00000276062 DNAJC5Q9H3Z4 198 aa24.11■■□□□ 1.45
NDUFB11-201ENST00000276062 BAZ1AQ9NRL2 1556 aaPredicted RBP23.83■■□□□ 1.41
NDUFB11-201ENST00000276062 SMARCA4P51532 1647 aa23.73■■□□□ 1.39
NDUFB11-201ENST00000276062 MROH2BQ7Z745 1585 aa23.69■■□□□ 1.38
NDUFB11-201ENST00000276062 RSF1Q96T23 1441 aaPredicted RBP23.66■■□□□ 1.38
NDUFB11-201ENST00000276062 CUX2O14529 1486 aa23.62■■□□□ 1.37
NDUFB11-201ENST00000276062 SUPT5HO00267 1087 aaKnown RBP23.56■■□□□ 1.36
NDUFB11-201ENST00000276062 SMARCA2P51531 1590 aa23.51■■□□□ 1.35
NDUFB11-201ENST00000276062 PEG3Q9GZU2 1588 aa23.51■■□□□ 1.35
NDUFB11-201ENST00000276062 WIZO95785 1651 aa23.47■■□□□ 1.35
NDUFB11-201ENST00000276062 ATAD2BQ9ULI0 1458 aa23.46■■□□□ 1.35
NDUFB11-201ENST00000276062 ERCC6Q03468 1493 aa23.43■■□□□ 1.34
NDUFB11-201ENST00000276062 NCAPD3P42695 1498 aa23.38■■□□□ 1.33
NDUFB11-201ENST00000276062 BAZ1BQ9UIG0 1483 aaKnown RBP23.32■■□□□ 1.32
NDUFB11-201ENST00000276062 HMGXB3Q12766 1538 aa23.31■■□□□ 1.32
NDUFB11-201ENST00000276062 TOP2AP11388 1531 aaKnown RBP23.28■■□□□ 1.32
NDUFB11-201ENST00000276062 NESP48681 1621 aa23.19■■□□□ 1.3
NDUFB11-201ENST00000276062 THOC2Q8NI27 1593 aaKnown RBP23.15■■□□□ 1.3
NDUFB11-201ENST00000276062 CCDC88BA6NC98 1476 aa23.01■■□□□ 1.27
NDUFB11-201ENST00000276062 KIF21AQ7Z4S6 1674 aa22.97■■□□□ 1.27
NDUFB11-201ENST00000276062 LAMC3Q9Y6N6 1575 aa22.96■■□□□ 1.27
NDUFB11-201ENST00000276062 TRIM41Q8WV44 630 aa22.81■■□□□ 1.24
NDUFB11-201ENST00000276062 CADPSQ9ULU8 1353 aa22.75■■□□□ 1.23
NDUFB11-201ENST00000276062 PDS5BQ9NTI5 1447 aa22.74■■□□□ 1.23
NDUFB11-201ENST00000276062 CFTRP13569 1480 aa22.72■■□□□ 1.23
NDUFB11-201ENST00000276062 WDR62O43379 1518 aa22.66■■□□□ 1.22
NDUFB11-201ENST00000276062 MRC2Q9UBG0 1479 aa22.64■■□□□ 1.21
NDUFB11-201ENST00000276062 PRDM2Q13029 1718 aa22.6■■□□□ 1.21
NDUFB11-201ENST00000276062 FANCD2Q9BXW9 1451 aa22.46■■□□□ 1.19
NDUFB11-201ENST00000276062 CEP164Q9UPV0 1460 aa22.44■■□□□ 1.18
NDUFB11-201ENST00000276062 CHIC1Q5VXU3 224 aa22.33■■□□□ 1.17
NDUFB11-201ENST00000276062 WRNQ14191 1432 aaPredicted RBP eCLIP22.32■■□□□ 1.16
NDUFB11-201ENST00000276062 OSCARQ8IYS5 282 aa22.32■■□□□ 1.16
NDUFB11-201ENST00000276062 ABCC8Q09428 1581 aa22.31■■□□□ 1.16
NDUFB11-201ENST00000276062 RIMBP3CA6NJZ7 1639 aa22.28■■□□□ 1.16
NDUFB11-201ENST00000276062 RIMBP3BA6NNM3 1639 aa22.28■■□□□ 1.16
NDUFB11-201ENST00000276062 RIMBP3Q9UFD9 1639 aa22.28■■□□□ 1.16
NDUFB11-201ENST00000276062 URB2Q14146 1524 aaKnown RBP22.25■■□□□ 1.15
NDUFB11-201ENST00000276062 DNMBPQ6XZF7 1577 aa22.2■■□□□ 1.14
NDUFB11-201ENST00000276062 TOP2BQ02880 1626 aa22.2■■□□□ 1.14
NDUFB11-201ENST00000276062 CUX1P39880 1505 aa22.19■■□□□ 1.14
NDUFB11-201ENST00000276062 BIVM-ERCC5R4GMW8 1640 aa22.18■■□□□ 1.14
NDUFB11-201ENST00000276062 SYNJ1O43426 1573 aa22.17■■□□□ 1.14
NDUFB11-201ENST00000276062 TOPBP1Q92547 1522 aa22.16■■□□□ 1.14
NDUFB11-201ENST00000276062 ARHGEF11O15085 1522 aa22.11■■□□□ 1.13
NDUFB11-201ENST00000276062 ZNF608Q9ULD9 1512 aaPredicted RBP22.05■■□□□ 1.12
NDUFB11-201ENST00000276062 FGD5Q6ZNL6 1462 aa22.04■■□□□ 1.12
NDUFB11-201ENST00000276062 POLA1P09884 1462 aaPredicted RBP22.01■■□□□ 1.11
NDUFB11-201ENST00000276062 IFT140Q96RY7 1462 aa21.99■■□□□ 1.11
NDUFB11-201ENST00000276062 SOGA1O94964 1423 aa21.97■■□□□ 1.11
NDUFB11-201ENST00000276062 EIF4G3O43432 1585 aaKnown RBP21.97■■□□□ 1.11
NDUFB11-201ENST00000276062 AEBP2Q6ZN18 517 aaPredicted RBP21.96■■□□□ 1.11
NDUFB11-201ENST00000276062 CHD1O14646 1710 aa21.93■■□□□ 1.1
NDUFB11-201ENST00000276062 RAD54L2Q9Y4B4 1467 aa21.89■■□□□ 1.09
NDUFB11-201ENST00000276062 ABCA10Q8WWZ4 1543 aa21.88■■□□□ 1.09
NDUFB11-201ENST00000276062 ARAP1Q96P48 1450 aa21.86■■□□□ 1.09
NDUFB11-201ENST00000276062 EEA1Q15075 1411 aa21.86■■□□□ 1.09
NDUFB11-201ENST00000276062 TARBP1Q13395 1621 aaKnown RBP21.85■■□□□ 1.09
NDUFB11-201ENST00000276062 KIF27Q86VH2 1401 aa21.84■■□□□ 1.09
NDUFB11-201ENST00000276062 CYB5RLQ6IPT4 315 aa21.83■■□□□ 1.09
NDUFB11-201ENST00000276062 WDR97A6NE52 1622 aa21.8■■□□□ 1.08
NDUFB11-201ENST00000276062 TRHP20396 242 aaPredicted RBP21.75■■□□□ 1.07
NDUFB11-201ENST00000276062 TDRD9Q8NDG6 1382 aaKnown RBP21.74■■□□□ 1.07
NDUFB11-201ENST00000276062 AQRO60306 1485 aaKnown RBP eCLIP21.73■■□□□ 1.072e-6■□□□□ 9
NDUFB11-201ENST00000276062 FAM9AQ8IZU1 332 aaPredicted RBP21.73■■□□□ 1.07
NDUFB11-201ENST00000276062 RUSC2Q8N2Y8 1516 aa21.72■■□□□ 1.07
NDUFB11-201ENST00000276062 CSRNP3Q8WYN3 585 aa21.72■■□□□ 1.07
NDUFB11-201ENST00000276062 GAPVD1Q14C86 1478 aa21.71■■□□□ 1.07
NDUFB11-201ENST00000276062 ABCA5Q8WWZ7 1642 aa21.71■■□□□ 1.07
NDUFB11-201ENST00000276062 ERICH3Q5RHP9 1530 aa21.65■■□□□ 1.06
NDUFB11-201ENST00000276062 IGF1RP08069 1367 aa21.64■■□□□ 1.06
NDUFB11-201ENST00000276062 GRIN2BQ13224 1484 aa21.64■■□□□ 1.05
NDUFB11-201ENST00000276062 CLASP1Q7Z460 1538 aa21.63■■□□□ 1.05
NDUFB11-201ENST00000276062 PBRM1Q86U86 1689 aa21.6■■□□□ 1.05
NDUFB11-201ENST00000276062 FBLN2P98095 1184 aa21.59■■□□□ 1.05
NDUFB11-201ENST00000276062 CUL7Q14999 1698 aa21.57■■□□□ 1.04
NDUFB11-201ENST00000276062 CARMIL1Q5VZK9 1371 aa21.55■■□□□ 1.04
NDUFB11-201ENST00000276062 SNAPC4Q5SXM2 1469 aa21.53■■□□□ 1.04
NDUFB11-201ENST00000276062 MAGI1Q96QZ7 1491 aaPredicted RBP21.52■■□□□ 1.04
NDUFB11-201ENST00000276062 PRXQ9BXM0 1461 aa21.52■■□□□ 1.04
NDUFB11-201ENST00000276062 KIF21BO75037 1637 aa21.51■■□□□ 1.03
NDUFB11-201ENST00000276062 FHAD1B1AJZ9 1412 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms