RNA–Protein interactions for RNA: ENST00000471193.1

FN1-217, Transcript of fibronectin 1, humanhuman

TSL 3

Gene FN1, Length 496 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-217ENST00000471193 NISCHQ9Y2I1 1504 aa27.48■■□□□ 1.99
FN1-217ENST00000471193 CCDC180Q9P1Z9 1646 aa24.27■■□□□ 1.48
FN1-217ENST00000471193 ABCC9O60706 1549 aa23.19■■□□□ 1.3
FN1-217ENST00000471193 ZCCHC6Q5VYS8 1495 aaKnown RBP23.04■■□□□ 1.28
FN1-217ENST00000471193 DCAF1Q9Y4B6 1507 aa22.79■■□□□ 1.24
FN1-217ENST00000471193 MYO15BQ96JP2 1530 aa22.71■■□□□ 1.23
FN1-217ENST00000471193 NACADO15069 1562 aa22.65■■□□□ 1.22
FN1-217ENST00000471193 DCAF8L2P0C7V8 631 aa22.6■■□□□ 1.21
FN1-217ENST00000471193 RB1CC1Q8TDY2 1594 aa22.56■■□□□ 1.2
FN1-217ENST00000471193 SCRIBQ14160 1630 aa22.15■■□□□ 1.14
FN1-217ENST00000471193 UNC13AQ9UPW8 1703 aa22.07■■□□□ 1.12
FN1-217ENST00000471193 SHROOM4Q9ULL8 1493 aa21.95■■□□□ 1.1
FN1-217ENST00000471193 BICRAQ9NZM4 1560 aa21.88■■□□□ 1.09
FN1-217ENST00000471193 PABPN1Q86U42 306 aaKnown RBP eCLIP21.69■■□□□ 1.06
FN1-217ENST00000471193 CECR2Q9BXF3 1484 aa21.34■■□□□ 1.01
FN1-217ENST00000471193 BAZ1AQ9NRL2 1556 aaPredicted RBP21.27■■□□□ 1
FN1-217ENST00000471193 EIF4G1Q04637 1599 aaKnown RBP21.26■□□□□ 0.99
FN1-217ENST00000471193 SMARCA4P51532 1647 aa21.24■□□□□ 0.99
FN1-217ENST00000471193 MROH2BQ7Z745 1585 aa21.19■□□□□ 0.98
FN1-217ENST00000471193 RSF1Q96T23 1441 aaPredicted RBP21.11■□□□□ 0.97
FN1-217ENST00000471193 PEG3Q9GZU2 1588 aa21.05■□□□□ 0.96
FN1-217ENST00000471193 CC2D2AQ9P2K1 1620 aa21.03■□□□□ 0.96
FN1-217ENST00000471193 WIZO95785 1651 aa20.99■□□□□ 0.95
FN1-217ENST00000471193 SMARCA2P51531 1590 aa20.98■□□□□ 0.95
FN1-217ENST00000471193 ATAD2BQ9ULI0 1458 aa20.97■□□□□ 0.95
FN1-217ENST00000471193 NCAPD3P42695 1498 aa20.88■□□□□ 0.93
FN1-217ENST00000471193 HMGXB3Q12766 1538 aa20.88■□□□□ 0.93
FN1-217ENST00000471193 SUPT5HO00267 1087 aaKnown RBP20.85■□□□□ 0.93
FN1-217ENST00000471193 BAZ1BQ9UIG0 1483 aaKnown RBP20.83■□□□□ 0.93
FN1-217ENST00000471193 TOP2AP11388 1531 aaKnown RBP20.82■□□□□ 0.92
FN1-217ENST00000471193 DNAJC5BQ9UF47 199 aa20.78■□□□□ 0.92
FN1-217ENST00000471193 CCDC88BA6NC98 1476 aa20.53■□□□□ 0.88
FN1-217ENST00000471193 CFTRP13569 1480 aa20.3■□□□□ 0.84
FN1-217ENST00000471193 CADPSQ9ULU8 1353 aa20.28■□□□□ 0.84
FN1-217ENST00000471193 LAMC3Q9Y6N6 1575 aa20.28■□□□□ 0.84
FN1-217ENST00000471193 NESP48681 1621 aa20.23■□□□□ 0.83
FN1-217ENST00000471193 PRDM2Q13029 1718 aa20.22■□□□□ 0.83
FN1-217ENST00000471193 PDS5BQ9NTI5 1447 aa20.08■□□□□ 0.8
FN1-217ENST00000471193 FANCD2Q9BXW9 1451 aa20.07■□□□□ 0.8
FN1-217ENST00000471193 KIF21AQ7Z4S6 1674 aa20.03■□□□□ 0.8
FN1-217ENST00000471193 CEP164Q9UPV0 1460 aa20.01■□□□□ 0.79
FN1-217ENST00000471193 ABCC8Q09428 1581 aa19.95■□□□□ 0.78
FN1-217ENST00000471193 ERCC6Q03468 1493 aa19.94■□□□□ 0.78
FN1-217ENST00000471193 WRNQ14191 1432 aaPredicted RBP eCLIP19.89■□□□□ 0.77
FN1-217ENST00000471193 THOC2Q8NI27 1593 aaKnown RBP19.88■□□□□ 0.77
FN1-217ENST00000471193 MRC2Q9UBG0 1479 aa19.88■□□□□ 0.77
FN1-217ENST00000471193 SYNJ1O43426 1573 aa19.86■□□□□ 0.77
FN1-217ENST00000471193 DNMBPQ6XZF7 1577 aa19.86■□□□□ 0.77
FN1-217ENST00000471193 CUX1P39880 1505 aa19.86■□□□□ 0.77
FN1-217ENST00000471193 URB2Q14146 1524 aaKnown RBP19.86■□□□□ 0.77
FN1-217ENST00000471193 BIVM-ERCC5R4GMW8 1640 aa19.84■□□□□ 0.77
FN1-217ENST00000471193 TOP2BQ02880 1626 aa19.83■□□□□ 0.76
FN1-217ENST00000471193 WDR62O43379 1518 aa19.82■□□□□ 0.76
FN1-217ENST00000471193 TOPBP1Q92547 1522 aa19.81■□□□□ 0.76
FN1-217ENST00000471193 CHIC1Q5VXU3 224 aa19.77■□□□□ 0.76
FN1-217ENST00000471193 FGD5Q6ZNL6 1462 aa19.71■□□□□ 0.75
FN1-217ENST00000471193 POLA1P09884 1462 aaPredicted RBP19.68■□□□□ 0.74
FN1-217ENST00000471193 TRIM41Q8WV44 630 aa19.67■□□□□ 0.74
FN1-217ENST00000471193 CUX2O14529 1486 aa19.61■□□□□ 0.73
FN1-217ENST00000471193 TARBP1Q13395 1621 aaKnown RBP19.58■□□□□ 0.73
FN1-217ENST00000471193 WDR97A6NE52 1622 aa19.58■□□□□ 0.72
FN1-217ENST00000471193 IFT140Q96RY7 1462 aa19.56■□□□□ 0.72
FN1-217ENST00000471193 RAD54L2Q9Y4B4 1467 aa19.56■□□□□ 0.72
FN1-217ENST00000471193 SOGA1O94964 1423 aa19.56■□□□□ 0.72
FN1-217ENST00000471193 ABCA10Q8WWZ4 1543 aa19.55■□□□□ 0.72
FN1-217ENST00000471193 ABCA5Q8WWZ7 1642 aa19.46■□□□□ 0.71
FN1-217ENST00000471193 ZNF608Q9ULD9 1512 aaPredicted RBP19.43■□□□□ 0.7
FN1-217ENST00000471193 EIF4G3O43432 1585 aaKnown RBP19.42■□□□□ 0.7
FN1-217ENST00000471193 KIF27Q86VH2 1401 aa19.42■□□□□ 0.7
FN1-217ENST00000471193 EEA1Q15075 1411 aa19.4■□□□□ 0.7
FN1-217ENST00000471193 RUSC2Q8N2Y8 1516 aa19.4■□□□□ 0.7
FN1-217ENST00000471193 TDRD9Q8NDG6 1382 aaKnown RBP19.38■□□□□ 0.69
FN1-217ENST00000471193 GAPVD1Q14C86 1478 aa19.36■□□□□ 0.69
FN1-217ENST00000471193 AQRO60306 1485 aaKnown RBP eCLIP19.35■□□□□ 0.691e-15■■□□□ 11.5
FN1-217ENST00000471193 PBRM1Q86U86 1689 aa19.35■□□□□ 0.69
FN1-217ENST00000471193 ERICH3Q5RHP9 1530 aa19.32■□□□□ 0.68
FN1-217ENST00000471193 GRIN2BQ13224 1484 aa19.3■□□□□ 0.68
FN1-217ENST00000471193 IGF1RP08069 1367 aa19.26■□□□□ 0.67
FN1-217ENST00000471193 CUL7Q14999 1698 aa19.26■□□□□ 0.67
FN1-217ENST00000471193 ADAMTS12P58397 1594 aa19.24■□□□□ 0.67
FN1-217ENST00000471193 FAM9AQ8IZU1 332 aaPredicted RBP19.24■□□□□ 0.67
FN1-217ENST00000471193 SNAPC4Q5SXM2 1469 aa19.23■□□□□ 0.67
FN1-217ENST00000471193 MAGI1Q96QZ7 1491 aaPredicted RBP19.22■□□□□ 0.67
FN1-217ENST00000471193 CSRNP3Q8WYN3 585 aa19.22■□□□□ 0.67
FN1-217ENST00000471193 PRXQ9BXM0 1461 aa19.21■□□□□ 0.67
FN1-217ENST00000471193 KIF21BO75037 1637 aa19.2■□□□□ 0.66
FN1-217ENST00000471193 FHAD1B1AJZ9 1412 aa19.17■□□□□ 0.66
FN1-217ENST00000471193 CARMIL1Q5VZK9 1371 aa19.16■□□□□ 0.66
FN1-217ENST00000471193 SYNJ2O15056 1496 aa19.13■□□□□ 0.65
FN1-217ENST00000471193 RAPGEF2Q9Y4G8 1499 aa19.13■□□□□ 0.65
FN1-217ENST00000471193 GOLGA3Q08378 1498 aa19.09■□□□□ 0.65
FN1-217ENST00000471193 GRIN2AQ12879 1464 aa19.08■□□□□ 0.64
FN1-217ENST00000471193 CHD1O14646 1710 aa19.05■□□□□ 0.64
FN1-217ENST00000471193 CHMP7Q8WUX9 453 aaPredicted RBP18.99■□□□□ 0.63
FN1-217ENST00000471193 CEP170Q5SW79 1584 aa18.98■□□□□ 0.63
FN1-217ENST00000471193 NUP160Q12769 1436 aa18.98■□□□□ 0.63
FN1-217ENST00000471193 CTTNBP2Q8WZ74 1663 aa18.97■□□□□ 0.63
FN1-217ENST00000471193 FBLN2P98095 1184 aa18.95■□□□□ 0.62
FN1-217ENST00000471193 EHMT2Q96KQ7 1210 aa18.94■□□□□ 0.62
FN1-217ENST00000471193 LOC105371045A0A1W2PR82 267 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 211.3 ms