RNA–Protein interactions for RNA: ENST00000262746.5

PRDX1-201, Transcript of peroxiredoxin 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRDX1, Length 1,234 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDX1-201ENST00000262746 NISCHQ9Y2I1 1504 aa50.19■■■■■ 5.62
PRDX1-201ENST00000262746 ABCC9O60706 1549 aa45.35■■■■■ 4.85
PRDX1-201ENST00000262746 CCDC180Q9P1Z9 1646 aa45.05■■■■■ 4.8
PRDX1-201ENST00000262746 RB1CC1Q8TDY2 1594 aa43.06■■■■■ 4.48
PRDX1-201ENST00000262746 DNAJC5BQ9UF47 199 aa42.85■■■■■ 4.45
PRDX1-201ENST00000262746 NACADO15069 1562 aa42.73■■■■■ 4.43
PRDX1-201ENST00000262746 DCAF8L2P0C7V8 631 aa42.5■■■■■ 4.39
PRDX1-201ENST00000262746 PABPN1Q86U42 306 aaKnown RBP eCLIP42.24■■■■■ 4.35
PRDX1-201ENST00000262746 MYO15BQ96JP2 1530 aa42.13■■■■■ 4.33
PRDX1-201ENST00000262746 UNC13AQ9UPW8 1703 aa41.92■■■■■ 4.3
PRDX1-201ENST00000262746 BICRAQ9NZM4 1560 aa41.8■■■■■ 4.28
PRDX1-201ENST00000262746 ZCCHC6Q5VYS8 1495 aaKnown RBP41.53■■■■■ 4.24
PRDX1-201ENST00000262746 DCAF1Q9Y4B6 1507 aa41.48■■■■■ 4.23
PRDX1-201ENST00000262746 SHROOM4Q9ULL8 1493 aa41.29■■■■■ 4.2
PRDX1-201ENST00000262746 SCRIBQ14160 1630 aa41.01■■■■■ 4.16
PRDX1-201ENST00000262746 CC2D2AQ9P2K1 1620 aa40.93■■■■■ 4.14
PRDX1-201ENST00000262746 CECR2Q9BXF3 1484 aa40.9■■■■■ 4.14
PRDX1-201ENST00000262746 EIF4G1Q04637 1599 aaKnown RBP40.8■■■■■ 4.12
PRDX1-201ENST00000262746 DNAJC5Q9H3Z4 198 aa39.57■■■■□ 3.93
PRDX1-201ENST00000262746 NCAPD3P42695 1498 aa39.52■■■■□ 3.92
PRDX1-201ENST00000262746 ATAD2BQ9ULI0 1458 aa39.32■■■■□ 3.89
PRDX1-201ENST00000262746 CUX2O14529 1486 aa39.23■■■■□ 3.87
PRDX1-201ENST00000262746 ERCC6Q03468 1493 aa39.17■■■■□ 3.86
PRDX1-201ENST00000262746 SMARCA2P51531 1590 aa39.17■■■■□ 3.86
PRDX1-201ENST00000262746 SMARCA4P51532 1647 aa39.14■■■■□ 3.86
PRDX1-201ENST00000262746 HMGXB3Q12766 1538 aa39.12■■■■□ 3.85
PRDX1-201ENST00000262746 BAZ1AQ9NRL2 1556 aaPredicted RBP38.95■■■■□ 3.83
PRDX1-201ENST00000262746 BAZ1BQ9UIG0 1483 aaKnown RBP38.89■■■■□ 3.82
PRDX1-201ENST00000262746 NESP48681 1621 aa38.88■■■■□ 3.81
PRDX1-201ENST00000262746 PEG3Q9GZU2 1588 aa38.82■■■■□ 3.8
PRDX1-201ENST00000262746 MROH2BQ7Z745 1585 aa38.65■■■■□ 3.78
PRDX1-201ENST00000262746 LAMC3Q9Y6N6 1575 aa38.58■■■■□ 3.77
PRDX1-201ENST00000262746 THOC2Q8NI27 1593 aaKnown RBP38.48■■■■□ 3.75
PRDX1-201ENST00000262746 PDS5BQ9NTI5 1447 aa38.44■■■■□ 3.74
PRDX1-201ENST00000262746 CADPSQ9ULU8 1353 aa38.31■■■■□ 3.72
PRDX1-201ENST00000262746 KIF21AQ7Z4S6 1674 aa38.27■■■■□ 3.72
PRDX1-201ENST00000262746 WIZO95785 1651 aa38.11■■■■□ 3.69
PRDX1-201ENST00000262746 MRC2Q9UBG0 1479 aa38.07■■■■□ 3.68
PRDX1-201ENST00000262746 WDR62O43379 1518 aa37.96■■■■□ 3.67
PRDX1-201ENST00000262746 CEP164Q9UPV0 1460 aa37.86■■■■□ 3.65
PRDX1-201ENST00000262746 RSF1Q96T23 1441 aaPredicted RBP37.81■■■■□ 3.64
PRDX1-201ENST00000262746 FANCD2Q9BXW9 1451 aa37.81■■■■□ 3.64
PRDX1-201ENST00000262746 CFTRP13569 1480 aa37.79■■■■□ 3.64
PRDX1-201ENST00000262746 TOP2AP11388 1531 aaKnown RBP37.66■■■■□ 3.62
PRDX1-201ENST00000262746 TRIM41Q8WV44 630 aa37.64■■■■□ 3.62
PRDX1-201ENST00000262746 URB2Q14146 1524 aaKnown RBP37.51■■■■□ 3.59
PRDX1-201ENST00000262746 OSCARQ8IYS5 282 aa37.48■■■■□ 3.59
PRDX1-201ENST00000262746 CCDC88BA6NC98 1476 aa37.28■■■■□ 3.56
PRDX1-201ENST00000262746 PRDM2Q13029 1718 aa37.18■■■■□ 3.54
PRDX1-201ENST00000262746 IFT140Q96RY7 1462 aa37.15■■■■□ 3.54
PRDX1-201ENST00000262746 ZNF608Q9ULD9 1512 aaPredicted RBP37.08■■■■□ 3.53
PRDX1-201ENST00000262746 TOPBP1Q92547 1522 aa37.06■■■■□ 3.52
PRDX1-201ENST00000262746 ABCC8Q09428 1581 aa37.03■■■■□ 3.52
PRDX1-201ENST00000262746 DNMBPQ6XZF7 1577 aa36.87■■■■□ 3.49
PRDX1-201ENST00000262746 RIMBP3CA6NJZ7 1639 aa36.85■■■■□ 3.49
PRDX1-201ENST00000262746 RIMBP3BA6NNM3 1639 aa36.85■■■■□ 3.49
PRDX1-201ENST00000262746 RIMBP3Q9UFD9 1639 aa36.85■■■■□ 3.49
PRDX1-201ENST00000262746 EIF4G3O43432 1585 aaKnown RBP36.78■■■■□ 3.48
PRDX1-201ENST00000262746 ARHGEF11O15085 1522 aa36.76■■■■□ 3.48
PRDX1-201ENST00000262746 AQRO60306 1485 aaKnown RBP eCLIP36.75■■■■□ 3.478e-7■■■■□ 23.2
PRDX1-201ENST00000262746 TARBP1Q13395 1621 aaKnown RBP36.71■■■■□ 3.47
PRDX1-201ENST00000262746 POLA1P09884 1462 aaPredicted RBP36.67■■■■□ 3.46
PRDX1-201ENST00000262746 CYB5RLQ6IPT4 315 aa36.58■■■■□ 3.45
PRDX1-201ENST00000262746 FBLN2P98095 1184 aa36.56■■■■□ 3.44
PRDX1-201ENST00000262746 SOGA1O94964 1423 aa36.55■■■■□ 3.44
PRDX1-201ENST00000262746 RAD54L2Q9Y4B4 1467 aa36.54■■■■□ 3.44
PRDX1-201ENST00000262746 CHD1O14646 1710 aa36.51■■■■□ 3.43
PRDX1-201ENST00000262746 TDRD9Q8NDG6 1382 aaKnown RBP36.5■■■■□ 3.43
PRDX1-201ENST00000262746 FGD5Q6ZNL6 1462 aa36.39■■■■□ 3.42
PRDX1-201ENST00000262746 ARAP1Q96P48 1450 aa36.38■■■■□ 3.41
PRDX1-201ENST00000262746 WDR97A6NE52 1622 aa36.35■■■■□ 3.41
PRDX1-201ENST00000262746 SNAPC4Q5SXM2 1469 aa36.32■■■■□ 3.41
PRDX1-201ENST00000262746 CUX1P39880 1505 aa36.32■■■■□ 3.4
PRDX1-201ENST00000262746 CHMP7Q8WUX9 453 aaPredicted RBP36.29■■■■□ 3.4
PRDX1-201ENST00000262746 MAGI1Q96QZ7 1491 aaPredicted RBP36.25■■■■□ 3.39
PRDX1-201ENST00000262746 GRIN2BQ13224 1484 aa36.24■■■■□ 3.39
PRDX1-201ENST00000262746 TRHP20396 242 aaPredicted RBP36.23■■■■□ 3.39
PRDX1-201ENST00000262746 CLASP1Q7Z460 1538 aa36.19■■■■□ 3.38
PRDX1-201ENST00000262746 SYNJ1O43426 1573 aa36.15■■■■□ 3.38
PRDX1-201ENST00000262746 SYNJ2O15056 1496 aa36.14■■■■□ 3.38
PRDX1-201ENST00000262746 GAPVD1Q14C86 1478 aa36.06■■■■□ 3.36
PRDX1-201ENST00000262746 ABCA10Q8WWZ4 1543 aa36■■■■□ 3.35
PRDX1-201ENST00000262746 SUPT5HO00267 1087 aaKnown RBP35.95■■■■□ 3.35
PRDX1-201ENST00000262746 PBRM1Q86U86 1689 aa35.91■■■■□ 3.34
PRDX1-201ENST00000262746 ABCA5Q8WWZ7 1642 aa35.89■■■■□ 3.34
PRDX1-201ENST00000262746 WRNQ14191 1432 aaPredicted RBP eCLIP35.83■■■■□ 3.33
PRDX1-201ENST00000262746 GRIN2AQ12879 1464 aa35.74■■■■□ 3.31
PRDX1-201ENST00000262746 NUP160Q12769 1436 aa35.66■■■■□ 3.3
PRDX1-201ENST00000262746 TOP2BQ02880 1626 aa35.65■■■■□ 3.3
PRDX1-201ENST00000262746 ADAMTS12P58397 1594 aa35.64■■■■□ 3.3
PRDX1-201ENST00000262746 BIVM-ERCC5R4GMW8 1640 aa35.63■■■■□ 3.29
PRDX1-201ENST00000262746 FHAD1B1AJZ9 1412 aa35.63■■■■□ 3.29
PRDX1-201ENST00000262746 ERCC6L2Q5T890 1561 aa35.59■■■■□ 3.29
PRDX1-201ENST00000262746 CEP170Q5SW79 1584 aa35.58■■■■□ 3.29
PRDX1-201ENST00000262746 ERICH3Q5RHP9 1530 aa35.53■■■■□ 3.28
PRDX1-201ENST00000262746 SHROOM2Q13796 1616 aa35.46■■■■□ 3.27
PRDX1-201ENST00000262746 AEBP2Q6ZN18 517 aaPredicted RBP35.36■■■■□ 3.25
PRDX1-201ENST00000262746 JPH4Q96JJ6 628 aa35.36■■■■□ 3.25
PRDX1-201ENST00000262746 PRG4Q92954 1404 aaPredicted RBP35.34■■■■□ 3.25
PRDX1-201ENST00000262746 RUSC2Q8N2Y8 1516 aa35.12■■■■□ 3.21
Retrieved 100 of 20,778 RNA–protein pairs in 178.7 ms