RNA–Protein interactions for RNA: ENST00000578454.5

NCOA4-201, Transcript of nuclear receptor coactivator 4, humanhuman

TSL 1 (best) BASIC

Gene NCOA4, Length 2,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOA4-201ENST00000578454 NISCHQ9Y2I1 1504 aa19.31■□□□□ 0.68
NCOA4-201ENST00000578454 CCDC180Q9P1Z9 1646 aa16.91■□□□□ 0.3
NCOA4-201ENST00000578454 ZCCHC6Q5VYS8 1495 aaKnown RBP16.19■□□□□ 0.18
NCOA4-201ENST00000578454 ABCC9O60706 1549 aa16.07■□□□□ 0.16
NCOA4-201ENST00000578454 DCAF8L2P0C7V8 631 aa16.02■□□□□ 0.15
NCOA4-201ENST00000578454 DCAF1Q9Y4B6 1507 aa15.99■□□□□ 0.15
NCOA4-201ENST00000578454 CHIC1Q5VXU3 224 aa15.98■□□□□ 0.15
NCOA4-201ENST00000578454 MYO15BQ96JP2 1530 aa15.85■□□□□ 0.13
NCOA4-201ENST00000578454 NACADO15069 1562 aa15.78■□□□□ 0.12
NCOA4-201ENST00000578454 RB1CC1Q8TDY2 1594 aa15.68■□□□□ 0.1
NCOA4-201ENST00000578454 SHROOM4Q9ULL8 1493 aa15.66■□□□□ 0.1
NCOA4-201ENST00000578454 SCRIBQ14160 1630 aa15.5■□□□□ 0.07
NCOA4-201ENST00000578454 UNC13AQ9UPW8 1703 aa15.3■□□□□ 0.04
NCOA4-201ENST00000578454 AEBP2Q6ZN18 517 aaPredicted RBP15.27■□□□□ 0.04
NCOA4-201ENST00000578454 BICRAQ9NZM4 1560 aa15.16■□□□□ 0.02
NCOA4-201ENST00000578454 PABPN1Q86U42 306 aaKnown RBP eCLIP15.14■□□□□ 0.01
NCOA4-201ENST00000578454 SUPT5HO00267 1087 aaKnown RBP15.04■□□□□ -0
NCOA4-201ENST00000578454 CECR2Q9BXF3 1484 aa14.99□□□□□ -0.01
NCOA4-201ENST00000578454 BAZ1AQ9NRL2 1556 aaPredicted RBP14.94□□□□□ -0.02
NCOA4-201ENST00000578454 RSF1Q96T23 1441 aaPredicted RBP14.93□□□□□ -0.02
NCOA4-201ENST00000578454 MROH2BQ7Z745 1585 aa14.9□□□□□ -0.02
NCOA4-201ENST00000578454 SMARCA4P51532 1647 aa14.86□□□□□ -0.03
NCOA4-201ENST00000578454 SLC24A1O60721 1099 aa14.86□□□□□ -0.03
NCOA4-201ENST00000578454 WIZO95785 1651 aa14.77□□□□□ -0.05
NCOA4-201ENST00000578454 EIF4G1Q04637 1599 aaKnown RBP14.73□□□□□ -0.05
NCOA4-201ENST00000578454 PEG3Q9GZU2 1588 aa14.69□□□□□ -0.06
NCOA4-201ENST00000578454 SMARCA2P51531 1590 aa14.66□□□□□ -0.06
NCOA4-201ENST00000578454 ATAD2BQ9ULI0 1458 aa14.65□□□□□ -0.06
NCOA4-201ENST00000578454 TOP2AP11388 1531 aaKnown RBP14.63□□□□□ -0.07
NCOA4-201ENST00000578454 EHMT2Q96KQ7 1210 aa14.63□□□□□ -0.07
NCOA4-201ENST00000578454 BAZ1BQ9UIG0 1483 aaKnown RBP14.58□□□□□ -0.08
NCOA4-201ENST00000578454 NCAPD3P42695 1498 aa14.56□□□□□ -0.08
NCOA4-201ENST00000578454 CC2D2AQ9P2K1 1620 aa14.54□□□□□ -0.08
NCOA4-201ENST00000578454 HMGXB3Q12766 1538 aa14.52□□□□□ -0.08
NCOA4-201ENST00000578454 CCDC88BA6NC98 1476 aa14.48□□□□□ -0.09
NCOA4-201ENST00000578454 PHF23Q9BUL5 403 aaPredicted RBP14.47□□□□□ -0.09
NCOA4-201ENST00000578454 DNAJC5BQ9UF47 199 aa14.25□□□□□ -0.13
NCOA4-201ENST00000578454 CFTRP13569 1480 aa14.2□□□□□ -0.14
NCOA4-201ENST00000578454 CADPSQ9ULU8 1353 aa14.19□□□□□ -0.14
NCOA4-201ENST00000578454 TRIM41Q8WV44 630 aa14.18□□□□□ -0.14
NCOA4-201ENST00000578454 ABCC8Q09428 1581 aa14.12□□□□□ -0.15
NCOA4-201ENST00000578454 PRDM2Q13029 1718 aa14.11□□□□□ -0.15
NCOA4-201ENST00000578454 LAMC3Q9Y6N6 1575 aa14.09□□□□□ -0.15
NCOA4-201ENST00000578454 WRNQ14191 1432 aaPredicted RBP eCLIP14.08□□□□□ -0.165e-6■■□□□ 12.5
NCOA4-201ENST00000578454 PLPPR3Q6T4P5 718 aa14.07□□□□□ -0.16
NCOA4-201ENST00000578454 NESP48681 1621 aa14.06□□□□□ -0.16
NCOA4-201ENST00000578454 FANCD2Q9BXW9 1451 aa14.02□□□□□ -0.17
NCOA4-201ENST00000578454 PDS5BQ9NTI5 1447 aa14□□□□□ -0.17
NCOA4-201ENST00000578454 SYNJ1O43426 1573 aa13.99□□□□□ -0.17
NCOA4-201ENST00000578454 TOP2BQ02880 1626 aa13.97□□□□□ -0.17
NCOA4-201ENST00000578454 CEP164Q9UPV0 1460 aa13.95□□□□□ -0.18
NCOA4-201ENST00000578454 BIVM-ERCC5R4GMW8 1640 aa13.95□□□□□ -0.18
NCOA4-201ENST00000578454 CUX1P39880 1505 aa13.94□□□□□ -0.18
NCOA4-201ENST00000578454 KIF21AQ7Z4S6 1674 aa13.89□□□□□ -0.19
NCOA4-201ENST00000578454 FAM9AQ8IZU1 332 aaPredicted RBP13.88□□□□□ -0.19
NCOA4-201ENST00000578454 DNMBPQ6XZF7 1577 aa13.87□□□□□ -0.19
NCOA4-201ENST00000578454 TOPBP1Q92547 1522 aa13.85□□□□□ -0.19
NCOA4-201ENST00000578454 EEA1Q15075 1411 aa13.84□□□□□ -0.19
NCOA4-201ENST00000578454 SOGA1O94964 1423 aa13.84□□□□□ -0.19
NCOA4-201ENST00000578454 RTN4Q9NQC3 1192 aaKnown RBP13.84□□□□□ -0.19
NCOA4-201ENST00000578454 URB2Q14146 1524 aaKnown RBP13.83□□□□□ -0.2
NCOA4-201ENST00000578454 ERCC6Q03468 1493 aa13.82□□□□□ -0.2
NCOA4-201ENST00000578454 FGD5Q6ZNL6 1462 aa13.82□□□□□ -0.2
NCOA4-201ENST00000578454 MRC2Q9UBG0 1479 aa13.81□□□□□ -0.2
NCOA4-201ENST00000578454 RUSC2Q8N2Y8 1516 aa13.78□□□□□ -0.2
NCOA4-201ENST00000578454 CSRNP3Q8WYN3 585 aa13.78□□□□□ -0.2
NCOA4-201ENST00000578454 POLA1P09884 1462 aaPredicted RBP13.77□□□□□ -0.21
NCOA4-201ENST00000578454 LOC105371045A0A1W2PR82 267 aa13.76□□□□□ -0.21
NCOA4-201ENST00000578454 KIF27Q86VH2 1401 aa13.74□□□□□ -0.21
NCOA4-201ENST00000578454 WDR62O43379 1518 aa13.73□□□□□ -0.21
NCOA4-201ENST00000578454 KCNA4P22459 653 aa13.72□□□□□ -0.21
NCOA4-201ENST00000578454 CUX2O14529 1486 aa13.71□□□□□ -0.21
NCOA4-201ENST00000578454 RAD54L2Q9Y4B4 1467 aa13.71□□□□□ -0.21
NCOA4-201ENST00000578454 ABCA10Q8WWZ4 1543 aa13.7□□□□□ -0.22
NCOA4-201ENST00000578454 THOC2Q8NI27 1593 aaKnown RBP13.69□□□□□ -0.22
NCOA4-201ENST00000578454 WDR97A6NE52 1622 aa13.64□□□□□ -0.23
NCOA4-201ENST00000578454 KIF21BO75037 1637 aa13.64□□□□□ -0.23
NCOA4-201ENST00000578454 TARBP1Q13395 1621 aaKnown RBP13.64□□□□□ -0.23
NCOA4-201ENST00000578454 IFT140Q96RY7 1462 aa13.63□□□□□ -0.23
NCOA4-201ENST00000578454 GOLGA3Q08378 1498 aa13.62□□□□□ -0.23
NCOA4-201ENST00000578454 IGF1RP08069 1367 aa13.62□□□□□ -0.23
NCOA4-201ENST00000578454 TDRD9Q8NDG6 1382 aaKnown RBP13.61□□□□□ -0.23
NCOA4-201ENST00000578454 PRXQ9BXM0 1461 aa13.6□□□□□ -0.23
NCOA4-201ENST00000578454 UBTFP17480 764 aaKnown RBP13.59□□□□□ -0.23
NCOA4-201ENST00000578454 GAPVD1Q14C86 1478 aa13.59□□□□□ -0.23
NCOA4-201ENST00000578454 ABCA5Q8WWZ7 1642 aa13.58□□□□□ -0.23
NCOA4-201ENST00000578454 ERICH3Q5RHP9 1530 aa13.58□□□□□ -0.24
NCOA4-201ENST00000578454 TNIKQ9UKE5 1360 aa13.57□□□□□ -0.24
NCOA4-201ENST00000578454 RAPGEF2Q9Y4G8 1499 aa13.56□□□□□ -0.24
NCOA4-201ENST00000578454 CARMIL1Q5VZK9 1371 aa13.56□□□□□ -0.24
NCOA4-201ENST00000578454 AQRO60306 1485 aaKnown RBP eCLIP13.53□□□□□ -0.244e-7■■■■□ 25.8
NCOA4-201ENST00000578454 CUL7Q14999 1698 aa13.53□□□□□ -0.24
NCOA4-201ENST00000578454 ZNF608Q9ULD9 1512 aaPredicted RBP13.52□□□□□ -0.25
NCOA4-201ENST00000578454 GRIN2BQ13224 1484 aa13.51□□□□□ -0.25
NCOA4-201ENST00000578454 PBRM1Q86U86 1689 aa13.5□□□□□ -0.25
NCOA4-201ENST00000578454 EIF4G3O43432 1585 aaKnown RBP13.48□□□□□ -0.25
NCOA4-201ENST00000578454 CEP162Q5TB80 1403 aa13.46□□□□□ -0.25
NCOA4-201ENST00000578454 FHAD1B1AJZ9 1412 aa13.44□□□□□ -0.26
NCOA4-201ENST00000578454 ADAMTS12P58397 1594 aa13.42□□□□□ -0.26
NCOA4-201ENST00000578454 AMER1Q5JTC6 1135 aaPredicted RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms