RNA–Protein interactions for RNA: ENST00000398637.9

SLC38A1-201, Transcript of solute carrier family 38 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC38A1, Length 8,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-201ENST00000398637 DCAF8L2P0C7V8 631 aa20.35■□□□□ 0.85
SLC38A1-201ENST00000398637 FAM9AQ8IZU1 332 aaPredicted RBP18.59■□□□□ 0.57
SLC38A1-201ENST00000398637 EHMT2Q96KQ7 1210 aa18.55■□□□□ 0.56
SLC38A1-201ENST00000398637 SUPT5HO00267 1087 aaKnown RBP18.28■□□□□ 0.52
SLC38A1-201ENST00000398637 APLP2Q06481 763 aa18.18■□□□□ 0.5
SLC38A1-201ENST00000398637 PELP1Q8IZL8 1130 aaKnown RBP17.99■□□□□ 0.47
SLC38A1-201ENST00000398637 ATP1B4Q9UN42 357 aaPredicted RBP17.95■□□□□ 0.46
SLC38A1-201ENST00000398637 RANGAP1P46060 587 aaPredicted RBP17.86■□□□□ 0.45
SLC38A1-201ENST00000398637 SHROOM4Q9ULL8 1493 aa17.86■□□□□ 0.45
SLC38A1-201ENST00000398637 TTBK1Q5TCY1 1321 aaPredicted RBP17.81■□□□□ 0.44
SLC38A1-201ENST00000398637 MYT1LQ9UL68 1186 aa17.8■□□□□ 0.44
SLC38A1-201ENST00000398637 CHIC1Q5VXU3 224 aa17.61■□□□□ 0.41
SLC38A1-201ENST00000398637 ERICH6Q7L0X2 663 aa17.46■□□□□ 0.39
SLC38A1-201ENST00000398637 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.32■□□□□ 0.36
SLC38A1-201ENST00000398637 HNRNPUL2Q1KMD3 747 aaKnown RBP17.32■□□□□ 0.36
SLC38A1-201ENST00000398637 CCER1Q8TC90 406 aaPredicted RBP17.27■□□□□ 0.35
SLC38A1-201ENST00000398637 SLC4A1APQ9BWU0 796 aaKnown RBP17.24■□□□□ 0.35
SLC38A1-201ENST00000398637 POLR3GLQ9BT43 218 aa17.13■□□□□ 0.33
SLC38A1-201ENST00000398637 PCGF6Q9BYE7 350 aa17.11■□□□□ 0.33
SLC38A1-201ENST00000398637 UBTFP17480 764 aaKnown RBP17.09■□□□□ 0.33
SLC38A1-201ENST00000398637 NISCHQ9Y2I1 1504 aa17.05■□□□□ 0.32
SLC38A1-201ENST00000398637 CNGB1Q14028 1251 aaPredicted RBP16.95■□□□□ 0.3
SLC38A1-201ENST00000398637 NEFLP07196 543 aa16.91■□□□□ 0.3
SLC38A1-201ENST00000398637 DAXXQ9UER7 740 aaPredicted RBP16.9■□□□□ 0.3
SLC38A1-201ENST00000398637 SLC24A1O60721 1099 aa16.88■□□□□ 0.29
SLC38A1-201ENST00000398637 BCANQ96GW7 911 aa16.83■□□□□ 0.29
SLC38A1-201ENST00000398637 TRIM41Q8WV44 630 aa16.82■□□□□ 0.28
SLC38A1-201ENST00000398637 ITGAEP38570 1179 aa16.78■□□□□ 0.28
SLC38A1-201ENST00000398637 PLPPR3Q6T4P5 718 aa16.75■□□□□ 0.27
SLC38A1-201ENST00000398637 MYT1Q01538 1121 aa16.74■□□□□ 0.27
SLC38A1-201ENST00000398637 CENPBP07199 599 aaPredicted RBP16.67■□□□□ 0.26
SLC38A1-201ENST00000398637 YTHDC1Q96MU7 727 aaKnown RBP16.66■□□□□ 0.26
SLC38A1-201ENST00000398637 FBLN2P98095 1184 aa16.58■□□□□ 0.24
SLC38A1-201ENST00000398637 CLSPNQ9HAW4 1339 aa16.57■□□□□ 0.24
SLC38A1-201ENST00000398637 BCL11AQ9H165 835 aa16.56■□□□□ 0.24
SLC38A1-201ENST00000398637 PPARGC1BQ86YN6 1023 aaKnown RBP16.55■□□□□ 0.24
SLC38A1-201ENST00000398637 ESF1Q9H501 851 aaKnown RBP16.49■□□□□ 0.23
SLC38A1-201ENST00000398637 ZBTB47Q9UFB7 747 aaPredicted RBP16.46■□□□□ 0.23
SLC38A1-201ENST00000398637 A0A0G2JS52 829 aa16.4■□□□□ 0.22
SLC38A1-201ENST00000398637 ZNF316A6NFI3 1004 aaPredicted RBP16.38■□□□□ 0.21
SLC38A1-201ENST00000398637 SCAF1Q9H7N4 1312 aaKnown RBP16.34■□□□□ 0.21
SLC38A1-201ENST00000398637 ZEB1P37275 1124 aaPredicted RBP16.29■□□□□ 0.2
SLC38A1-201ENST00000398637 TRIM52Q96A61 297 aa16.28■□□□□ 0.2
SLC38A1-201ENST00000398637 NEFMP07197 916 aa16.27■□□□□ 0.2
SLC38A1-201ENST00000398637 STAG3Q9UJ98 1225 aa16.25■□□□□ 0.19
SLC38A1-201ENST00000398637 ZNF326Q5BKZ1 582 aaKnown RBP16.23■□□□□ 0.19
SLC38A1-201ENST00000398637 FAM50AQ14320 339 aaKnown RBP16.2■□□□□ 0.18
SLC38A1-201ENST00000398637 CANXP27824 592 aaKnown RBP16.12■□□□□ 0.17
SLC38A1-201ENST00000398637 PLEKHG5O94827 1062 aa16.11■□□□□ 0.17
SLC38A1-201ENST00000398637 NPM1P06748 294 aaKnown RBP eCLIP16.08■□□□□ 0.17
SLC38A1-201ENST00000398637 ARID3CA6NKF2 412 aa16.07■□□□□ 0.16
SLC38A1-201ENST00000398637 PABPN1Q86U42 306 aaKnown RBP eCLIP16.07■□□□□ 0.16
SLC38A1-201ENST00000398637 CHGAP10645 457 aaKnown RBP16.05■□□□□ 0.16
SLC38A1-201ENST00000398637 NPM2Q86SE8 214 aaKnown RBP15.99■□□□□ 0.15
SLC38A1-201ENST00000398637 ZBTB7CA1YPR0 619 aa15.97■□□□□ 0.15
SLC38A1-201ENST00000398637 NEUROD1Q13562 356 aa15.96■□□□□ 0.15
SLC38A1-201ENST00000398637 HAP1P54257 671 aaPredicted RBP15.96■□□□□ 0.14
SLC38A1-201ENST00000398637 RTL5Q5HYW3 569 aaPredicted RBP15.95■□□□□ 0.14
SLC38A1-201ENST00000398637 C14orf37Q86TY3 774 aa15.95■□□□□ 0.14
SLC38A1-201ENST00000398637 ZNF777Q9ULD5 760 aaPredicted RBP15.94■□□□□ 0.14
SLC38A1-201ENST00000398637 SENP3Q9H4L4 574 aaPredicted RBP15.9■□□□□ 0.14
SLC38A1-201ENST00000398637 CDK11BP21127 795 aaKnown RBP15.86■□□□□ 0.13
SLC38A1-201ENST00000398637 CDK11AQ9UQ88 783 aaPredicted RBP15.86■□□□□ 0.13
SLC38A1-201ENST00000398637 TULP1O00294 542 aaPredicted RBP15.85■□□□□ 0.13
SLC38A1-201ENST00000398637 ARXQ96QS3 562 aa15.81■□□□□ 0.12
SLC38A1-201ENST00000398637 NPHP1O15259 732 aa15.8■□□□□ 0.12
SLC38A1-201ENST00000398637 ARID4BQ4LE39 1312 aaPredicted RBP15.79■□□□□ 0.12
SLC38A1-201ENST00000398637 ABCC9O60706 1549 aa15.77■□□□□ 0.12
SLC38A1-201ENST00000398637 NCBP3Q53F19 620 aaKnown RBP15.75■□□□□ 0.11
SLC38A1-201ENST00000398637 P3H3Q8IVL6 736 aa15.74■□□□□ 0.11
SLC38A1-201ENST00000398637 TRHP20396 242 aaPredicted RBP15.74■□□□□ 0.11
SLC38A1-201ENST00000398637 HSP90AA1P07900 732 aaKnown RBP15.67■□□□□ 0.1
SLC38A1-201ENST00000398637 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.63■□□□□ 0.09
SLC38A1-201ENST00000398637 PPP1R15AO75807 674 aaPredicted RBP15.63■□□□□ 0.09
SLC38A1-201ENST00000398637 TRIM26Q12899 539 aaPredicted RBP15.6■□□□□ 0.09
SLC38A1-201ENST00000398637 LMOD2Q6P5Q4 547 aa15.58■□□□□ 0.08
SLC38A1-201ENST00000398637 ANP32CO43423 234 aa15.58■□□□□ 0.08
SLC38A1-201ENST00000398637 ANP32BQ92688 251 aaKnown RBP15.51■□□□□ 0.07
SLC38A1-201ENST00000398637 AEBP2Q6ZN18 517 aaPredicted RBP15.5■□□□□ 0.07
SLC38A1-201ENST00000398637 LOC105371045A0A1W2PR82 267 aa15.49■□□□□ 0.07
SLC38A1-201ENST00000398637 CLSTN1O94985 981 aa15.41■□□□□ 0.06
SLC38A1-201ENST00000398637 SALL2Q9Y467 1007 aaPredicted RBP15.4■□□□□ 0.06
SLC38A1-201ENST00000398637 TAOK2Q9UL54 1235 aa15.39■□□□□ 0.05
SLC38A1-201ENST00000398637 KCNH8Q96L42 1107 aa15.39■□□□□ 0.05
SLC38A1-201ENST00000398637 UPF2Q9HAU5 1272 aaKnown RBP15.38■□□□□ 0.05
SLC38A1-201ENST00000398637 CHMP7Q8WUX9 453 aaPredicted RBP15.37■□□□□ 0.05
SLC38A1-201ENST00000398637 DIEXFQ68CQ4 756 aaKnown RBP15.36■□□□□ 0.05
SLC38A1-201ENST00000398637 MYH16Q9H6N6 1097 aa15.35■□□□□ 0.05
SLC38A1-201ENST00000398637 GOLGA2Q08379 1002 aa15.34■□□□□ 0.05
SLC38A1-201ENST00000398637 HRCP23327 699 aa15.34■□□□□ 0.05
SLC38A1-201ENST00000398637 KRI1Q8N9T8 703 aaKnown RBP15.33■□□□□ 0.04
SLC38A1-201ENST00000398637 ISY1Q9ULR0 285 aaKnown RBP15.32■□□□□ 0.04
SLC38A1-201ENST00000398637 KDM2AQ9Y2K7 1162 aa15.3■□□□□ 0.04
SLC38A1-201ENST00000398637 PPM1GO15355 546 aaPredicted RBP15.29■□□□□ 0.04
SLC38A1-201ENST00000398637 CCDC9Q9Y3X0 531 aaKnown RBP15.27■□□□□ 0.04
SLC38A1-201ENST00000398637 PRM3Q9NNZ6 103 aa15.27■□□□□ 0.03
SLC38A1-201ENST00000398637 WDR43Q15061 677 aaKnown RBP eCLIP15.26■□□□□ 0.03
SLC38A1-201ENST00000398637 TMC1Q8TDI8 760 aa15.26■□□□□ 0.03
SLC38A1-201ENST00000398637 ANP32AP39687 249 aaKnown RBP15.24■□□□□ 0.03
SLC38A1-201ENST00000398637 TMX4Q9H1E5 349 aaPredicted RBP15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms