Protein–RNA interactions for Protein: Q9H0L4

CSTF2T, Cleavage stimulation factor subunit 2 tau variant, humanhuman

Known RBP eCLIP

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2TQ9H0L4 ZNF451-206ENST00000370711 609 ntTSL 412.46□□□□□ -0.412e-7■■■■□ 21.3
CSTF2TQ9H0L4 ZNF451-215ENST00000509251 513 ntTSL 46.95□□□□□ -1.32e-7■■■■□ 21.3
CSTF2TQ9H0L4 ZNF451-211ENST00000504603 561 ntTSL 55.68□□□□□ -1.52e-7■■■■□ 21.3
CSTF2TQ9H0L4 ZNF451-218ENST00000515290 581 ntTSL 45.42□□□□□ -1.542e-7■■■■□ 21.3
CSTF2TQ9H0L4 ZNF451-214ENST00000509071 477 ntTSL 54.85□□□□□ -1.632e-7■■■■□ 21.3
CSTF2TQ9H0L4 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.24□□□□□ -2.052e-7■■■■□ 21.3
CSTF2TQ9H0L4 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.45■□□□□ 0.72e-6■■■■□ 21.3
CSTF2TQ9H0L4 EPPK1-202ENST00000615648 16002 ntAPPRIS P2 TSL 5 BASIC9.6□□□□□ -0.876e-7■■■■□ 21.3
CSTF2TQ9H0L4 CBFA2T3-203ENST00000562719 539 ntTSL 510.01□□□□□ -0.814e-7■■■■□ 21.3
CSTF2TQ9H0L4 ANKRD11-213ENST00000567736 2750 ntTSL 213.73□□□□□ -0.215e-7■■■■□ 21.3
CSTF2TQ9H0L4 SH3BP2-213ENST00000508385 876 ntTSL 313.81□□□□□ -0.22e-7■■■■□ 21.3
CSTF2TQ9H0L4 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC25.94■■□□□ 1.746e-12■■■■□ 21.3
CSTF2TQ9H0L4 UBP1-205ENST00000456378 581 ntTSL 422.2■■□□□ 1.146e-12■■■■□ 21.3
CSTF2TQ9H0L4 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.476e-12■■■■□ 21.3
CSTF2TQ9H0L4 UBP1-213ENST00000496310 544 ntTSL 46.84□□□□□ -1.316e-12■■■■□ 21.3
CSTF2TQ9H0L4 LINC01169-201ENST00000558797 833 ntTSL 1 (best) BASIC9.78□□□□□ -0.843e-10■■■■□ 21.3
CSTF2TQ9H0L4 CTBP1-214ENST00000514495 564 ntTSL 226.11■■□□□ 1.772e-7■■■■□ 21.3
CSTF2TQ9H0L4 CTBP1-217ENST00000515399 985 ntTSL 318.37■□□□□ 0.532e-7■■■■□ 21.3
CSTF2TQ9H0L4 CTBP1-212ENST00000513420 704 ntTSL 313.97□□□□□ -0.172e-7■■■■□ 21.3
CSTF2TQ9H0L4 TMC6-204ENST00000585849 552 ntTSL 218.13■□□□□ 0.492e-7■■■■□ 21.3
CSTF2TQ9H0L4 XPOT-204ENST00000540203 548 ntTSL 411.51□□□□□ -0.576e-18■■■■□ 21.3
CSTF2TQ9H0L4 PDIA5-205ENST00000484644 667 ntTSL 522.07■■□□□ 1.125e-8■■■■□ 21.3
CSTF2TQ9H0L4 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 05e-7■■■■□ 21.3
CSTF2TQ9H0L4 PIP5K1C-208ENST00000637724 435 ntTSL 319.05■□□□□ 0.649e-7■■■■□ 21.3
CSTF2TQ9H0L4 ATXN1-210ENST00000498374 1648 ntTSL 1 (best)7.11□□□□□ -1.272e-7■■■■□ 21.3
CSTF2TQ9H0L4 ATXN1-204ENST00000473388 1569 ntTSL 1 (best)7.08□□□□□ -1.282e-7■■■■□ 21.3
CSTF2TQ9H0L4 ATXN1-205ENST00000479680 568 ntTSL 46.69□□□□□ -1.342e-7■■■■□ 21.3
CSTF2TQ9H0L4 ATXN1-207ENST00000483954 744 ntTSL 35.91□□□□□ -1.462e-7■■■■□ 21.3
CSTF2TQ9H0L4 ATXN1-208ENST00000492857 647 ntTSL 45.07□□□□□ -1.62e-7■■■■□ 21.3
CSTF2TQ9H0L4 ATXN1-203ENST00000467008 3362 ntTSL 1 (best)3.12□□□□□ -1.912e-7■■■■□ 21.3
CSTF2TQ9H0L4 UBE2F-217ENST00000448502 561 ntTSL 419.23■□□□□ 0.672e-6■■■■□ 21.2
CSTF2TQ9H0L4 UBE2F-212ENST00000439338 873 ntTSL 519.18■□□□□ 0.662e-6■■■■□ 21.2
CSTF2TQ9H0L4 UBE2F-206ENST00000416292 552 ntTSL 219.18■□□□□ 0.662e-6■■■■□ 21.2
CSTF2TQ9H0L4 UBE2F-215ENST00000441728 1242 ntTSL 219.07■□□□□ 0.642e-6■■■■□ 21.2
CSTF2TQ9H0L4 UBE2F-207ENST00000417231 984 ntTSL 518.69■□□□□ 0.582e-6■■■■□ 21.2
CSTF2TQ9H0L4 UBE2F-209ENST00000433568 574 ntTSL 418.41■□□□□ 0.542e-6■■■■□ 21.2
CSTF2TQ9H0L4 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC18.41■□□□□ 0.542e-6■■■■□ 21.2
CSTF2TQ9H0L4 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.512e-6■■■■□ 21.2
CSTF2TQ9H0L4 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC17.59■□□□□ 0.412e-6■■■■□ 21.2
CSTF2TQ9H0L4 UBE2F-218ENST00000454786 1292 ntTSL 516.36■□□□□ 0.212e-6■■■■□ 21.2
CSTF2TQ9H0L4 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC15.52■□□□□ 0.082e-6■■■■□ 21.2
CSTF2TQ9H0L4 UBE2F-214ENST00000440223 830 ntTSL 314.68□□□□□ -0.062e-6■■■■□ 21.2
CSTF2TQ9H0L4 UBE2F-219ENST00000455999 760 ntTSL 514.13□□□□□ -0.152e-6■■■■□ 21.2
CSTF2TQ9H0L4 UBE2F-216ENST00000445676 831 ntTSL 314.11□□□□□ -0.152e-6■■■■□ 21.2
CSTF2TQ9H0L4 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.322e-6■■■■□ 21.2
CSTF2TQ9H0L4 UBE2F-SCLY-202ENST00000449891 2902 ntAPPRIS ALT2 TSL 212.19□□□□□ -0.461e-6■■■■□ 21.2
CSTF2TQ9H0L4 UBE2F-213ENST00000439780 571 ntTSL 59.71□□□□□ -0.862e-6■■■■□ 21.2
CSTF2TQ9H0L4 UBE2F-SCLY-201ENST00000449191 951 ntAPPRIS P5 TSL 3 BASIC9.42□□□□□ -0.92e-6■■■■□ 21.2
CSTF2TQ9H0L4 UBE2F-208ENST00000433241 803 ntTSL 29.41□□□□□ -0.92e-6■■■■□ 21.2
CSTF2TQ9H0L4 UBE2F-211ENST00000434655 648 ntTSL 58.6□□□□□ -1.032e-6■■■■□ 21.2
CSTF2TQ9H0L4 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC6.8□□□□□ -1.322e-6■■■■□ 21.2
CSTF2TQ9H0L4 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC17.43■□□□□ 0.381e-7■■■■□ 21.2
CSTF2TQ9H0L4 RNASET2-202ENST00000358165 2445 ntTSL 215.14■□□□□ 0.011e-7■■■■□ 21.2
CSTF2TQ9H0L4 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.675e-7■■■■□ 21.2
CSTF2TQ9H0L4 NCOR2-213ENST00000448614 582 ntTSL 314.6□□□□□ -0.079e-7■■■■□ 21.2
CSTF2TQ9H0L4 HIPK2-201ENST00000342645 2937 ntTSL 5 BASIC8.58□□□□□ -1.042e-7■■■■□ 21.2
CSTF2TQ9H0L4 CD81-214ENST00000530239 425 ntTSL 222.82■■□□□ 1.241e-6■■■■□ 21.2
CSTF2TQ9H0L4 CD81-212ENST00000526072 1172 ntTSL 5 BASIC17.27■□□□□ 0.361e-6■■■■□ 21.2
CSTF2TQ9H0L4 CD81-211ENST00000524805 982 ntTSL 516.63■□□□□ 0.251e-6■■■■□ 21.2
CSTF2TQ9H0L4 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.233e-8■■■■□ 21.2
CSTF2TQ9H0L4 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.143e-8■■■■□ 21.2
CSTF2TQ9H0L4 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.133e-8■■■■□ 21.2
CSTF2TQ9H0L4 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.073e-8■■■■□ 21.2
CSTF2TQ9H0L4 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.033e-8■■■■□ 21.2
CSTF2TQ9H0L4 TSC2-206ENST00000439117 5073 ntTSL 1 (best)14.41□□□□□ -0.13e-8■■■■□ 21.2
CSTF2TQ9H0L4 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.133e-8■■■■□ 21.2
CSTF2TQ9H0L4 PUM2-203ENST00000361078 6251 ntTSL 2 BASIC12.48□□□□□ -0.413e-11■■■■□ 21.2
CSTF2TQ9H0L4 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.224e-7■■■■□ 21.2
CSTF2TQ9H0L4 CNOT6L-207ENST00000515441 572 ntTSL 414.43□□□□□ -0.15e-7■■■■□ 21.2
CSTF2TQ9H0L4 CNOT6L-204ENST00000506166 781 ntTSL 210.25□□□□□ -0.775e-7■■■■□ 21.2
CSTF2TQ9H0L4 CNOT6L-202ENST00000504804 1925 ntTSL 56.56□□□□□ -1.365e-7■■■■□ 21.2
CSTF2TQ9H0L4 CNOT6L-206ENST00000512485 1890 ntTSL 55.86□□□□□ -1.475e-7■■■■□ 21.2
CSTF2TQ9H0L4 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.835e-7■■■■□ 21.2
CSTF2TQ9H0L4 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.655e-10■■■■□ 21.2
CSTF2TQ9H0L4 TRIB3-204ENST00000615226 877 ntTSL 34.86□□□□□ -1.635e-10■■■■□ 21.2
CSTF2TQ9H0L4 CDHR3-207ENST00000470188 2199 ntTSL 218.61■□□□□ 0.574e-9■■■■□ 21.2
CSTF2TQ9H0L4 CDHR3-213ENST00000488386 540 ntTSL 36.49□□□□□ -1.374e-9■■■■□ 21.2
CSTF2TQ9H0L4 AGPAT3-202ENST00000327505 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.421e-6■■■■□ 21.2
CSTF2TQ9H0L4 AGPAT3-204ENST00000398061 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.421e-6■■■■□ 21.2
CSTF2TQ9H0L4 AGPAT3-207ENST00000445582 582 ntTSL 311.58□□□□□ -0.561e-6■■■■□ 21.2
CSTF2TQ9H0L4 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.922e-7■■■■□ 21.2
CSTF2TQ9H0L4 SDF4-205ENST00000465727 2095 ntTSL 218.8■□□□□ 0.62e-7■■■■□ 21.2
CSTF2TQ9H0L4 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.32e-7■■■■□ 21.2
CSTF2TQ9H0L4 SDF4-203ENST00000403997 728 ntTSL 312.54□□□□□ -0.42e-7■■■■□ 21.2
CSTF2TQ9H0L4 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.083e-6■■■■□ 21.2
CSTF2TQ9H0L4 WDR6-207ENST00000448293 3377 ntTSL 2 BASIC10.99□□□□□ -0.653e-9■■■■□ 21.2
CSTF2TQ9H0L4 MBD3-205ENST00000589064 1475 ntTSL 219.48■□□□□ 0.712e-7■■■■□ 21.2
CSTF2TQ9H0L4 MBD3-209ENST00000592012 2379 ntTSL 517.82■□□□□ 0.442e-7■■■■□ 21.2
CSTF2TQ9H0L4 FAM117A-206ENST00000506156 714 ntAPPRIS ALT2 TSL 324.03■■□□□ 1.448e-7■■■■□ 21.2
CSTF2TQ9H0L4 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC24■■□□□ 1.438e-7■■■■□ 21.2
CSTF2TQ9H0L4 FAM117A-210ENST00000514018 1128 ntTSL 516.46■□□□□ 0.238e-7■■■■□ 21.2
CSTF2TQ9H0L4 FAM117A-205ENST00000505159 739 ntTSL 314.11□□□□□ -0.158e-7■■■■□ 21.2
CSTF2TQ9H0L4 FAM117A-209ENST00000513602 1522 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.548e-7■■■■□ 21.2
CSTF2TQ9H0L4 FAM117A-204ENST00000503855 582 ntTSL 311.03□□□□□ -0.648e-7■■■■□ 21.2
CSTF2TQ9H0L4 FAM117A-207ENST00000509347 572 ntTSL 49.21□□□□□ -0.948e-7■■■■□ 21.2
CSTF2TQ9H0L4 FAM117A-203ENST00000503720 528 ntTSL 47.96□□□□□ -1.148e-7■■■■□ 21.2
CSTF2TQ9H0L4 RASGRP2-212ENST00000419843 400 ntTSL 319.79■□□□□ 0.768e-7■■■■□ 21.2
CSTF2TQ9H0L4 CFLAR-222ENST00000474842 1091 ntTSL 1 (best)10.02□□□□□ -0.818e-18■■■■□ 21.2
CSTF2TQ9H0L4 RRP1-202ENST00000471909 2544 ntTSL 1 (best)15.94■□□□□ 0.142e-7■■■■□ 21.2
CSTF2TQ9H0L4 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.172e-7■■■■□ 21.2
Retrieved 100 of 19,151 protein–RNA pairs in 157.1 ms