RNA–Protein interactions for RNA: ENST00000568454.5

TSC2-222, Transcript of TSC complex subunit 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TSC2, Length 5,434 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-222ENST00000568454 DCAF8L2P0C7V8 631 aa27.53■■■□□ 2
TSC2-222ENST00000568454 PELP1Q8IZL8 1130 aaKnown RBP26.8■■□□□ 1.88
TSC2-222ENST00000568454 NISCHQ9Y2I1 1504 aa26.78■■□□□ 1.88
TSC2-222ENST00000568454 SUPT5HO00267 1087 aaKnown RBP26.76■■□□□ 1.87
TSC2-222ENST00000568454 SHROOM4Q9ULL8 1493 aa25.96■■□□□ 1.75
TSC2-222ENST00000568454 EHMT2Q96KQ7 1210 aa25.83■■□□□ 1.72
TSC2-222ENST00000568454 CENPBP07199 599 aaPredicted RBP25.74■■□□□ 1.71
TSC2-222ENST00000568454 MYT1Q01538 1121 aa25.73■■□□□ 1.71
TSC2-222ENST00000568454 APLP2Q06481 763 aa25.72■■□□□ 1.71
TSC2-222ENST00000568454 PCGF6Q9BYE7 350 aa25.66■■□□□ 1.7
TSC2-222ENST00000568454 ERICH6Q7L0X2 663 aa25.6■■□□□ 1.69
TSC2-222ENST00000568454 ZEB1P37275 1124 aaPredicted RBP25.59■■□□□ 1.69
TSC2-222ENST00000568454 CCER1Q8TC90 406 aaPredicted RBP25.54■■□□□ 1.68
TSC2-222ENST00000568454 FAM9AQ8IZU1 332 aaPredicted RBP25.23■■□□□ 1.63
TSC2-222ENST00000568454 TTBK1Q5TCY1 1321 aaPredicted RBP25.12■■□□□ 1.61
TSC2-222ENST00000568454 NEFLP07196 543 aa25.03■■□□□ 1.6
TSC2-222ENST00000568454 YTHDC1Q96MU7 727 aaKnown RBP24.82■■□□□ 1.56
TSC2-222ENST00000568454 TRIM41Q8WV44 630 aa24.81■■□□□ 1.56
TSC2-222ENST00000568454 HRCP23327 699 aa24.63■■□□□ 1.53
TSC2-222ENST00000568454 RANGAP1P46060 587 aaPredicted RBP24.57■■□□□ 1.52
TSC2-222ENST00000568454 TRIM26Q12899 539 aaPredicted RBP24.56■■□□□ 1.52
TSC2-222ENST00000568454 UBTFP17480 764 aaKnown RBP24.5■■□□□ 1.51
TSC2-222ENST00000568454 ATP1B4Q9UN42 357 aaPredicted RBP24.4■■□□□ 1.5
TSC2-222ENST00000568454 DAXXQ9UER7 740 aaPredicted RBP24.32■■□□□ 1.48
TSC2-222ENST00000568454 PPARGC1BQ86YN6 1023 aaKnown RBP24.17■■□□□ 1.46
TSC2-222ENST00000568454 RTL5Q5HYW3 569 aaPredicted RBP23.99■■□□□ 1.43
TSC2-222ENST00000568454 DIEXFQ68CQ4 756 aaKnown RBP23.89■■□□□ 1.42
TSC2-222ENST00000568454 CHIC1Q5VXU3 224 aa23.82■■□□□ 1.4
TSC2-222ENST00000568454 LOC105371045A0A1W2PR82 267 aa23.8■■□□□ 1.4
TSC2-222ENST00000568454 HNRNPUL2Q1KMD3 747 aaKnown RBP23.78■■□□□ 1.4
TSC2-222ENST00000568454 ITGAEP38570 1179 aa23.78■■□□□ 1.4
TSC2-222ENST00000568454 POLR3GLQ9BT43 218 aa23.77■■□□□ 1.4
TSC2-222ENST00000568454 ZNF316A6NFI3 1004 aaPredicted RBP23.75■■□□□ 1.39
TSC2-222ENST00000568454 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.64■■□□□ 1.38
TSC2-222ENST00000568454 GTF3C3Q9Y5Q9 886 aa23.64■■□□□ 1.37
TSC2-222ENST00000568454 CLSPNQ9HAW4 1339 aa23.56■■□□□ 1.36
TSC2-222ENST00000568454 CNGB1Q14028 1251 aaPredicted RBP23.49■■□□□ 1.35
TSC2-222ENST00000568454 CDK11AQ9UQ88 783 aaPredicted RBP23.45■■□□□ 1.34
TSC2-222ENST00000568454 BCANQ96GW7 911 aa23.41■■□□□ 1.34
TSC2-222ENST00000568454 ACIN1Q9UKV3 1341 aaKnown RBP23.33■■□□□ 1.33
TSC2-222ENST00000568454 MYT1LQ9UL68 1186 aa23.31■■□□□ 1.32
TSC2-222ENST00000568454 ANP32CO43423 234 aa23.28■■□□□ 1.32
TSC2-222ENST00000568454 SLC4A1APQ9BWU0 796 aaKnown RBP23.17■■□□□ 1.3
TSC2-222ENST00000568454 FAM50AQ14320 339 aaKnown RBP23.15■■□□□ 1.3
TSC2-222ENST00000568454 NEUROD1Q13562 356 aa23.11■■□□□ 1.29
TSC2-222ENST00000568454 ANP32AP39687 249 aaKnown RBP23.1■■□□□ 1.29
TSC2-222ENST00000568454 TRIM52Q96A61 297 aa23.06■■□□□ 1.28
TSC2-222ENST00000568454 ZBTB47Q9UFB7 747 aaPredicted RBP22.99■■□□□ 1.27
TSC2-222ENST00000568454 EIF5BO60841 1220 aaKnown RBP22.87■■□□□ 1.25
TSC2-222ENST00000568454 CANXP27824 592 aaKnown RBP22.85■■□□□ 1.25
TSC2-222ENST00000568454 GLIPR1L2Q4G1C9 344 aa22.81■■□□□ 1.24
TSC2-222ENST00000568454 ZNF326Q5BKZ1 582 aaKnown RBP22.81■■□□□ 1.24
TSC2-222ENST00000568454 FKBP8Q14318 412 aa22.78■■□□□ 1.24
TSC2-222ENST00000568454 NPM2Q86SE8 214 aaKnown RBP22.77■■□□□ 1.24
TSC2-222ENST00000568454 ANP32BQ92688 251 aaKnown RBP22.74■■□□□ 1.23
TSC2-222ENST00000568454 NEFMP07197 916 aa22.6■■□□□ 1.21
TSC2-222ENST00000568454 DCAF1Q9Y4B6 1507 aa22.58■■□□□ 1.21
TSC2-222ENST00000568454 UPF2Q9HAU5 1272 aaKnown RBP22.56■■□□□ 1.2
TSC2-222ENST00000568454 HNRNPUQ00839 825 aaKnown RBP eCLIP22.55■■□□□ 1.2
TSC2-222ENST00000568454 ABCC9O60706 1549 aa22.54■■□□□ 1.2
TSC2-222ENST00000568454 SCAF1Q9H7N4 1312 aaKnown RBP22.53■■□□□ 1.2
TSC2-222ENST00000568454 HSP90AA1P07900 732 aaKnown RBP22.51■■□□□ 1.19
TSC2-222ENST00000568454 BCL11AQ9H165 835 aa22.51■■□□□ 1.19
TSC2-222ENST00000568454 CSRNP3Q8WYN3 585 aa22.48■■□□□ 1.19
TSC2-222ENST00000568454 NBR1Q14596 966 aa22.46■■□□□ 1.19
TSC2-222ENST00000568454 TONSLQ96HA7 1378 aa22.45■■□□□ 1.18
TSC2-222ENST00000568454 CCDC136Q96JN2 1154 aa22.43■■□□□ 1.18
TSC2-222ENST00000568454 DDX10Q13206 875 aaKnown RBP22.4■■□□□ 1.18
TSC2-222ENST00000568454 FAM9BQ8IZU0 186 aa22.36■■□□□ 1.17
TSC2-222ENST00000568454 SLC24A1O60721 1099 aa22.35■■□□□ 1.17
TSC2-222ENST00000568454 PABPN1Q86U42 306 aaKnown RBP eCLIP22.35■■□□□ 1.178e-7■■■□□ 18.8
TSC2-222ENST00000568454 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.31■■□□□ 1.16
TSC2-222ENST00000568454 ZCCHC6Q5VYS8 1495 aaKnown RBP22.26■■□□□ 1.15
TSC2-222ENST00000568454 ANP32EQ9BTT0 268 aa22.25■■□□□ 1.15
TSC2-222ENST00000568454 MIER1Q8N108 512 aa22.24■■□□□ 1.15
TSC2-222ENST00000568454 P3H3Q8IVL6 736 aa22.22■■□□□ 1.15
TSC2-222ENST00000568454 TMC1Q8TDI8 760 aa22.22■■□□□ 1.15
TSC2-222ENST00000568454 DDRGK1Q96HY6 314 aa22.19■■□□□ 1.14
TSC2-222ENST00000568454 MRS2Q9HD23 443 aa22.17■■□□□ 1.14
TSC2-222ENST00000568454 ARXQ96QS3 562 aa22.16■■□□□ 1.14
TSC2-222ENST00000568454 SALL2Q9Y467 1007 aaPredicted RBP22.13■■□□□ 1.13
TSC2-222ENST00000568454 ZNF777Q9ULD5 760 aaPredicted RBP22.12■■□□□ 1.13
TSC2-222ENST00000568454 BECN1Q14457 450 aa22.09■■□□□ 1.13
TSC2-222ENST00000568454 IRX6P78412 446 aaPredicted RBP22.08■■□□□ 1.13
TSC2-222ENST00000568454 WDR43Q15061 677 aaKnown RBP eCLIP22.07■■□□□ 1.12
TSC2-222ENST00000568454 TRIM44Q96DX7 344 aaPredicted RBP22.06■■□□□ 1.12
TSC2-222ENST00000568454 ARID3CA6NKF2 412 aa22.05■■□□□ 1.12
TSC2-222ENST00000568454 FBLN2P98095 1184 aa22.04■■□□□ 1.12
TSC2-222ENST00000568454 PPM1GO15355 546 aaPredicted RBP22■■□□□ 1.11
TSC2-222ENST00000568454 CCDC180Q9P1Z9 1646 aa21.99■■□□□ 1.11
TSC2-222ENST00000568454 ERICH6BQ5W0A0 696 aa21.99■■□□□ 1.11
TSC2-222ENST00000568454 TNNT2P45379 298 aaPredicted RBP21.97■■□□□ 1.11
TSC2-222ENST00000568454 GOLGA6L22H0YM25 854 aa21.95■■□□□ 1.1
TSC2-222ENST00000568454 SCRIBQ14160 1630 aa21.93■■□□□ 1.1
TSC2-222ENST00000568454 EIF4G2P78344 907 aaKnown RBP eCLIP21.92■■□□□ 1.1
TSC2-222ENST00000568454 MYH16Q9H6N6 1097 aa21.91■■□□□ 1.1
TSC2-222ENST00000568454 NCLP19338 710 aaKnown RBP21.89■■□□□ 1.1
TSC2-222ENST00000568454 CHGAP10645 457 aaKnown RBP21.84■■□□□ 1.09
TSC2-222ENST00000568454 CHIC2Q9UKJ5 165 aa21.82■■□□□ 1.08
TSC2-222ENST00000568454 NOP58Q9Y2X3 529 aaKnown RBP21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms