RNA–Protein interactions for RNA: ENST00000497547.1

RRP1-207, Transcript of ribosomal RNA processing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP1, Length 3,022 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1-207ENST00000497547 NISCHQ9Y2I1 1504 aa33.88■■■■□ 3.01
RRP1-207ENST00000497547 SHROOM4Q9ULL8 1493 aa28.93■■■□□ 2.22
RRP1-207ENST00000497547 CCDC180Q9P1Z9 1646 aa28.84■■■□□ 2.21
RRP1-207ENST00000497547 DCAF8L2P0C7V8 631 aa28.67■■■□□ 2.18
RRP1-207ENST00000497547 ZCCHC6Q5VYS8 1495 aaKnown RBP28.53■■■□□ 2.16
RRP1-207ENST00000497547 SUPT5HO00267 1087 aaKnown RBP28.11■■■□□ 2.09
RRP1-207ENST00000497547 DCAF1Q9Y4B6 1507 aa27.59■■■□□ 2.01
RRP1-207ENST00000497547 ABCC9O60706 1549 aa27.54■■■□□ 2
RRP1-207ENST00000497547 SCRIBQ14160 1630 aa27.28■■□□□ 1.96
RRP1-207ENST00000497547 MYO15BQ96JP2 1530 aa26.92■■□□□ 1.9
RRP1-207ENST00000497547 CHIC1Q5VXU3 224 aa26.92■■□□□ 1.9
RRP1-207ENST00000497547 NACADO15069 1562 aa26.84■■□□□ 1.89
RRP1-207ENST00000497547 RSF1Q96T23 1441 aaPredicted RBP26.7■■□□□ 1.87
RRP1-207ENST00000497547 CECR2Q9BXF3 1484 aa26.64■■□□□ 1.86
RRP1-207ENST00000497547 RB1CC1Q8TDY2 1594 aa26.56■■□□□ 1.84
RRP1-207ENST00000497547 MROH2BQ7Z745 1585 aa26.43■■□□□ 1.82
RRP1-207ENST00000497547 PABPN1Q86U42 306 aaKnown RBP eCLIP26.36■■□□□ 1.815e-7■■■□□ 15.8
RRP1-207ENST00000497547 LOC105371045A0A1W2PR82 267 aa26.29■■□□□ 1.8
RRP1-207ENST00000497547 WIZO95785 1651 aa26.26■■□□□ 1.79
RRP1-207ENST00000497547 UNC13AQ9UPW8 1703 aa26.23■■□□□ 1.79
RRP1-207ENST00000497547 TRIM41Q8WV44 630 aa26.07■■□□□ 1.76
RRP1-207ENST00000497547 FAM9AQ8IZU1 332 aaPredicted RBP26.06■■□□□ 1.76
RRP1-207ENST00000497547 EHMT2Q96KQ7 1210 aa26.04■■□□□ 1.76
RRP1-207ENST00000497547 BAZ1AQ9NRL2 1556 aaPredicted RBP26.01■■□□□ 1.75
RRP1-207ENST00000497547 BICRAQ9NZM4 1560 aa25.95■■□□□ 1.74
RRP1-207ENST00000497547 SMARCA4P51532 1647 aa25.89■■□□□ 1.74
RRP1-207ENST00000497547 PCGF6Q9BYE7 350 aa25.72■■□□□ 1.71
RRP1-207ENST00000497547 CCDC88BA6NC98 1476 aa25.7■■□□□ 1.7
RRP1-207ENST00000497547 TOP2AP11388 1531 aaKnown RBP25.69■■□□□ 1.7
RRP1-207ENST00000497547 SMARCA2P51531 1590 aa25.6■■□□□ 1.69
RRP1-207ENST00000497547 ABCC8Q09428 1581 aa25.58■■□□□ 1.69
RRP1-207ENST00000497547 EIF4G1Q04637 1599 aaKnown RBP25.54■■□□□ 1.68
RRP1-207ENST00000497547 ATAD2BQ9ULI0 1458 aa25.39■■□□□ 1.66
RRP1-207ENST00000497547 BAZ1BQ9UIG0 1483 aaKnown RBP25.31■■□□□ 1.64
RRP1-207ENST00000497547 PEG3Q9GZU2 1588 aa25.29■■□□□ 1.64
RRP1-207ENST00000497547 PPARGC1BQ86YN6 1023 aaKnown RBP25.28■■□□□ 1.64
RRP1-207ENST00000497547 SOGA1O94964 1423 aa25.24■■□□□ 1.63
RRP1-207ENST00000497547 RUSC2Q8N2Y8 1516 aa25.19■■□□□ 1.62
RRP1-207ENST00000497547 HRCP23327 699 aa25.18■■□□□ 1.62
RRP1-207ENST00000497547 TRIM26Q12899 539 aaPredicted RBP25.12■■□□□ 1.61
RRP1-207ENST00000497547 WRNQ14191 1432 aaPredicted RBP eCLIP25.09■■□□□ 1.61
RRP1-207ENST00000497547 TTBK1Q5TCY1 1321 aaPredicted RBP25.01■■□□□ 1.59
RRP1-207ENST00000497547 SYNJ1O43426 1573 aa25.01■■□□□ 1.59
RRP1-207ENST00000497547 CSRNP3Q8WYN3 585 aa24.98■■□□□ 1.59
RRP1-207ENST00000497547 UBTFP17480 764 aaKnown RBP24.96■■□□□ 1.59
RRP1-207ENST00000497547 NCAPD3P42695 1498 aa24.91■■□□□ 1.58
RRP1-207ENST00000497547 RANGAP1P46060 587 aaPredicted RBP24.85■■□□□ 1.57
RRP1-207ENST00000497547 CEP162Q5TB80 1403 aa24.8■■□□□ 1.56
RRP1-207ENST00000497547 HMGXB3Q12766 1538 aa24.8■■□□□ 1.56
RRP1-207ENST00000497547 EEA1Q15075 1411 aa24.7■■□□□ 1.54
RRP1-207ENST00000497547 TNIKQ9UKE5 1360 aa24.7■■□□□ 1.54
RRP1-207ENST00000497547 CC2D2AQ9P2K1 1620 aa24.66■■□□□ 1.54
RRP1-207ENST00000497547 GOLGA3Q08378 1498 aa24.65■■□□□ 1.54
RRP1-207ENST00000497547 TOP2BQ02880 1626 aa24.62■■□□□ 1.53
RRP1-207ENST00000497547 CFTRP13569 1480 aa24.61■■□□□ 1.53
RRP1-207ENST00000497547 RAPGEF2Q9Y4G8 1499 aa24.6■■□□□ 1.53
RRP1-207ENST00000497547 CUX1P39880 1505 aa24.6■■□□□ 1.53
RRP1-207ENST00000497547 DNAJC5BQ9UF47 199 aa24.55■■□□□ 1.52
RRP1-207ENST00000497547 CEP164Q9UPV0 1460 aa24.55■■□□□ 1.52
RRP1-207ENST00000497547 BIVM-ERCC5R4GMW8 1640 aa24.49■■□□□ 1.51
RRP1-207ENST00000497547 CADPSQ9ULU8 1353 aa24.48■■□□□ 1.51
RRP1-207ENST00000497547 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.47■■□□□ 1.51
RRP1-207ENST00000497547 KIF21BO75037 1637 aa24.44■■□□□ 1.5
RRP1-207ENST00000497547 CLIP1P30622 1438 aa24.44■■□□□ 1.5
RRP1-207ENST00000497547 NESP48681 1621 aa24.41■■□□□ 1.5
RRP1-207ENST00000497547 KIF27Q86VH2 1401 aa24.31■■□□□ 1.48
RRP1-207ENST00000497547 PRXQ9BXM0 1461 aa24.28■■□□□ 1.48
RRP1-207ENST00000497547 CUX2O14529 1486 aa24.28■■□□□ 1.48
RRP1-207ENST00000497547 FANCD2Q9BXW9 1451 aa24.26■■□□□ 1.47
RRP1-207ENST00000497547 CCER1Q8TC90 406 aaPredicted RBP24.26■■□□□ 1.47
RRP1-207ENST00000497547 FGD5Q6ZNL6 1462 aa24.25■■□□□ 1.47
RRP1-207ENST00000497547 PRDM2Q13029 1718 aa24.21■■□□□ 1.47
RRP1-207ENST00000497547 VPS8Q8N3P4 1428 aa24.2■■□□□ 1.46
RRP1-207ENST00000497547 HNRNPUL2Q1KMD3 747 aaKnown RBP24.19■■□□□ 1.46
RRP1-207ENST00000497547 RAD54L2Q9Y4B4 1467 aa24.17■■□□□ 1.46
RRP1-207ENST00000497547 ZEB1P37275 1124 aaPredicted RBP24.17■■□□□ 1.46
RRP1-207ENST00000497547 APLP2Q06481 763 aa24.17■■□□□ 1.46
RRP1-207ENST00000497547 IGF1RP08069 1367 aa24.17■■□□□ 1.46
RRP1-207ENST00000497547 ERICH3Q5RHP9 1530 aa24.12■■□□□ 1.45
RRP1-207ENST00000497547 ARAP1Q96P48 1450 aa24.09■■□□□ 1.45
RRP1-207ENST00000497547 KANK4Q5T7N3 995 aaPredicted RBP24.07■■□□□ 1.44
RRP1-207ENST00000497547 CARMIL1Q5VZK9 1371 aa24.05■■□□□ 1.44
RRP1-207ENST00000497547 P3H3Q8IVL6 736 aa24.05■■□□□ 1.44
RRP1-207ENST00000497547 TOPBP1Q92547 1522 aa24.04■■□□□ 1.44
RRP1-207ENST00000497547 POLA1P09884 1462 aaPredicted RBP24.02■■□□□ 1.44
RRP1-207ENST00000497547 ARHGAP35Q9NRY4 1499 aa23.98■■□□□ 1.43
RRP1-207ENST00000497547 URB2Q14146 1524 aaKnown RBP23.97■■□□□ 1.43
RRP1-207ENST00000497547 DNMBPQ6XZF7 1577 aa23.96■■□□□ 1.43
RRP1-207ENST00000497547 TDRD9Q8NDG6 1382 aaKnown RBP23.95■■□□□ 1.42
RRP1-207ENST00000497547 ATP1B4Q9UN42 357 aaPredicted RBP23.89■■□□□ 1.42
RRP1-207ENST00000497547 LAMC3Q9Y6N6 1575 aa23.88■■□□□ 1.41
RRP1-207ENST00000497547 ABCA10Q8WWZ4 1543 aa23.85■■□□□ 1.41
RRP1-207ENST00000497547 KIF21AQ7Z4S6 1674 aa23.83■■□□□ 1.41
RRP1-207ENST00000497547 PDS5BQ9NTI5 1447 aa23.82■■□□□ 1.4
RRP1-207ENST00000497547 ITGAEP38570 1179 aa23.81■■□□□ 1.4
RRP1-207ENST00000497547 FHOD3Q2V2M9 1422 aa23.74■■□□□ 1.39
RRP1-207ENST00000497547 GAPVD1Q14C86 1478 aa23.67■■□□□ 1.38
RRP1-207ENST00000497547 AQRO60306 1485 aaKnown RBP eCLIP23.64■■□□□ 1.374e-7■■■■■ 32.7
RRP1-207ENST00000497547 WDR97A6NE52 1622 aa23.62■■□□□ 1.37
RRP1-207ENST00000497547 ABCA5Q8WWZ7 1642 aa23.58■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms