RNA–Protein interactions for RNA: ENST00000219476.7

TSC2-201, Transcript of TSC complex subunit 2, humanhuman

APPRIS P3 TSL 5 BASIC

Gene TSC2, Length 6,156 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-201ENST00000219476 DCAF8L2P0C7V8 631 aa28.4■■■□□ 2.14
TSC2-201ENST00000219476 PELP1Q8IZL8 1130 aaKnown RBP26.92■■□□□ 1.9
TSC2-201ENST00000219476 FAM9AQ8IZU1 332 aaPredicted RBP26.35■■□□□ 1.81
TSC2-201ENST00000219476 EHMT2Q96KQ7 1210 aa26.25■■□□□ 1.79
TSC2-201ENST00000219476 SUPT5HO00267 1087 aaKnown RBP26.24■■□□□ 1.79
TSC2-201ENST00000219476 APLP2Q06481 763 aa26.17■■□□□ 1.78
TSC2-201ENST00000219476 ERICH6Q7L0X2 663 aa25.97■■□□□ 1.75
TSC2-201ENST00000219476 CCER1Q8TC90 406 aaPredicted RBP25.75■■□□□ 1.71
TSC2-201ENST00000219476 TTBK1Q5TCY1 1321 aaPredicted RBP25.37■■□□□ 1.65
TSC2-201ENST00000219476 SHROOM4Q9ULL8 1493 aa25.36■■□□□ 1.65
TSC2-201ENST00000219476 ATP1B4Q9UN42 357 aaPredicted RBP25.3■■□□□ 1.64
TSC2-201ENST00000219476 RANGAP1P46060 587 aaPredicted RBP25.18■■□□□ 1.62
TSC2-201ENST00000219476 NEFLP07196 543 aa25■■□□□ 1.59
TSC2-201ENST00000219476 CENPBP07199 599 aaPredicted RBP25■■□□□ 1.59
TSC2-201ENST00000219476 PCGF6Q9BYE7 350 aa24.91■■□□□ 1.58
TSC2-201ENST00000219476 MYT1LQ9UL68 1186 aa24.9■■□□□ 1.58
TSC2-201ENST00000219476 DAXXQ9UER7 740 aaPredicted RBP24.83■■□□□ 1.57
TSC2-201ENST00000219476 MYT1Q01538 1121 aa24.75■■□□□ 1.55
TSC2-201ENST00000219476 POLR3GLQ9BT43 218 aa24.48■■□□□ 1.51
TSC2-201ENST00000219476 YTHDC1Q96MU7 727 aaKnown RBP24.46■■□□□ 1.51
TSC2-201ENST00000219476 CHIC1Q5VXU3 224 aa24.45■■□□□ 1.5
TSC2-201ENST00000219476 UBTFP17480 764 aaKnown RBP24.44■■□□□ 1.5
TSC2-201ENST00000219476 ZEB1P37275 1124 aaPredicted RBP24.44■■□□□ 1.5
TSC2-201ENST00000219476 SLC4A1APQ9BWU0 796 aaKnown RBP24.39■■□□□ 1.49
TSC2-201ENST00000219476 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.37■■□□□ 1.49
TSC2-201ENST00000219476 HNRNPUL2Q1KMD3 747 aaKnown RBP24.37■■□□□ 1.49
TSC2-201ENST00000219476 TRIM41Q8WV44 630 aa24.24■■□□□ 1.47
TSC2-201ENST00000219476 ZNF316A6NFI3 1004 aaPredicted RBP24.12■■□□□ 1.45
TSC2-201ENST00000219476 CNGB1Q14028 1251 aaPredicted RBP24.11■■□□□ 1.45
TSC2-201ENST00000219476 CLSPNQ9HAW4 1339 aa24.09■■□□□ 1.45
TSC2-201ENST00000219476 NISCHQ9Y2I1 1504 aa23.99■■□□□ 1.43
TSC2-201ENST00000219476 ITGAEP38570 1179 aa23.93■■□□□ 1.42
TSC2-201ENST00000219476 RTL5Q5HYW3 569 aaPredicted RBP23.85■■□□□ 1.41
TSC2-201ENST00000219476 ZBTB47Q9UFB7 747 aaPredicted RBP23.83■■□□□ 1.41
TSC2-201ENST00000219476 SLC24A1O60721 1099 aa23.78■■□□□ 1.4
TSC2-201ENST00000219476 PPARGC1BQ86YN6 1023 aaKnown RBP23.7■■□□□ 1.38
TSC2-201ENST00000219476 BCANQ96GW7 911 aa23.53■■□□□ 1.36
TSC2-201ENST00000219476 BCL11AQ9H165 835 aa23.52■■□□□ 1.36
TSC2-201ENST00000219476 NEFMP07197 916 aa23.39■■□□□ 1.33
TSC2-201ENST00000219476 CANXP27824 592 aaKnown RBP23.35■■□□□ 1.33
TSC2-201ENST00000219476 TRIM52Q96A61 297 aa23.33■■□□□ 1.32
TSC2-201ENST00000219476 FAM50AQ14320 339 aaKnown RBP23.18■■□□□ 1.3
TSC2-201ENST00000219476 ZNF326Q5BKZ1 582 aaKnown RBP23.17■■□□□ 1.3
TSC2-201ENST00000219476 TRIM26Q12899 539 aaPredicted RBP23.13■■□□□ 1.29
TSC2-201ENST00000219476 ESF1Q9H501 851 aaKnown RBP23.07■■□□□ 1.28
TSC2-201ENST00000219476 CDK11BP21127 795 aaKnown RBP23■■□□□ 1.27
TSC2-201ENST00000219476 CDK11AQ9UQ88 783 aaPredicted RBP23■■□□□ 1.27
TSC2-201ENST00000219476 PLPPR3Q6T4P5 718 aa22.98■■□□□ 1.27
TSC2-201ENST00000219476 NEUROD1Q13562 356 aa22.97■■□□□ 1.27
TSC2-201ENST00000219476 FBLN2P98095 1184 aa22.97■■□□□ 1.27
TSC2-201ENST00000219476 ANP32BQ92688 251 aaKnown RBP22.97■■□□□ 1.27
TSC2-201ENST00000219476 HRCP23327 699 aa22.94■■□□□ 1.26
TSC2-201ENST00000219476 ANP32CO43423 234 aa22.86■■□□□ 1.25
TSC2-201ENST00000219476 HSP90AA1P07900 732 aaKnown RBP22.84■■□□□ 1.25
TSC2-201ENST00000219476 STAG3Q9UJ98 1225 aa22.84■■□□□ 1.25
TSC2-201ENST00000219476 A0A0G2JS52 829 aa22.8■■□□□ 1.24
TSC2-201ENST00000219476 SCAF1Q9H7N4 1312 aaKnown RBP22.75■■□□□ 1.23
TSC2-201ENST00000219476 ANP32AP39687 249 aaKnown RBP22.69■■□□□ 1.22
TSC2-201ENST00000219476 DIEXFQ68CQ4 756 aaKnown RBP22.68■■□□□ 1.22
TSC2-201ENST00000219476 NPM2Q86SE8 214 aaKnown RBP22.65■■□□□ 1.22
TSC2-201ENST00000219476 CHGAP10645 457 aaKnown RBP22.64■■□□□ 1.21
TSC2-201ENST00000219476 UPF2Q9HAU5 1272 aaKnown RBP22.6■■□□□ 1.21
TSC2-201ENST00000219476 EIF5BO60841 1220 aaKnown RBP22.54■■□□□ 1.2
TSC2-201ENST00000219476 ZNF777Q9ULD5 760 aaPredicted RBP22.53■■□□□ 1.2
TSC2-201ENST00000219476 ARID3CA6NKF2 412 aa22.51■■□□□ 1.19
TSC2-201ENST00000219476 NPM1P06748 294 aaKnown RBP eCLIP22.45■■□□□ 1.19
TSC2-201ENST00000219476 TULP1O00294 542 aaPredicted RBP22.45■■□□□ 1.18
TSC2-201ENST00000219476 LOC105371045A0A1W2PR82 267 aa22.44■■□□□ 1.18
TSC2-201ENST00000219476 ZBTB7CA1YPR0 619 aa22.43■■□□□ 1.18
TSC2-201ENST00000219476 GLIPR1L2Q4G1C9 344 aa22.4■■□□□ 1.18
TSC2-201ENST00000219476 PLEKHG5O94827 1062 aa22.33■■□□□ 1.16
TSC2-201ENST00000219476 HAP1P54257 671 aaPredicted RBP22.31■■□□□ 1.16
TSC2-201ENST00000219476 C14orf37Q86TY3 774 aa22.29■■□□□ 1.16
TSC2-201ENST00000219476 MYH16Q9H6N6 1097 aa22.29■■□□□ 1.16
TSC2-201ENST00000219476 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.25■■□□□ 1.15
TSC2-201ENST00000219476 ARXQ96QS3 562 aa22.24■■□□□ 1.15
TSC2-201ENST00000219476 P3H3Q8IVL6 736 aa22.22■■□□□ 1.15
TSC2-201ENST00000219476 NCBP3Q53F19 620 aaKnown RBP22.21■■□□□ 1.15
TSC2-201ENST00000219476 PABPN1Q86U42 306 aaKnown RBP eCLIP22.19■■□□□ 1.148e-7■■■□□ 18.8
TSC2-201ENST00000219476 NCLP19338 710 aaKnown RBP22.18■■□□□ 1.14
TSC2-201ENST00000219476 NPHP1O15259 732 aa22.17■■□□□ 1.14
TSC2-201ENST00000219476 GTF3C3Q9Y5Q9 886 aa22.16■■□□□ 1.14
TSC2-201ENST00000219476 ZRSR1Q15695 479 aaKnown RBP22.16■■□□□ 1.14
TSC2-201ENST00000219476 WDR43Q15061 677 aaKnown RBP eCLIP22.12■■□□□ 1.13
TSC2-201ENST00000219476 SALL2Q9Y467 1007 aaPredicted RBP22.12■■□□□ 1.13
TSC2-201ENST00000219476 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.07■■□□□ 1.123e-6■■■□□ 15.2
TSC2-201ENST00000219476 PPP1R15AO75807 674 aaPredicted RBP22.05■■□□□ 1.12
TSC2-201ENST00000219476 CLSTN1O94985 981 aa22.01■■□□□ 1.11
TSC2-201ENST00000219476 FAM9BQ8IZU0 186 aa21.99■■□□□ 1.11
TSC2-201ENST00000219476 SENP3Q9H4L4 574 aaPredicted RBP21.94■■□□□ 1.1
TSC2-201ENST00000219476 TONSLQ96HA7 1378 aa21.93■■□□□ 1.1
TSC2-201ENST00000219476 TMC1Q8TDI8 760 aa21.93■■□□□ 1.1
TSC2-201ENST00000219476 TRIM44Q96DX7 344 aaPredicted RBP21.92■■□□□ 1.1
TSC2-201ENST00000219476 HNRNPUQ00839 825 aaKnown RBP eCLIP21.91■■□□□ 1.1
TSC2-201ENST00000219476 CCDC136Q96JN2 1154 aa21.9■■□□□ 1.1
TSC2-201ENST00000219476 GOLGA6L22H0YM25 854 aa21.9■■□□□ 1.1
TSC2-201ENST00000219476 TAOK2Q9UL54 1235 aa21.9■■□□□ 1.1
TSC2-201ENST00000219476 FKBP8Q14318 412 aa21.89■■□□□ 1.09
TSC2-201ENST00000219476 PTMAP06454 111 aaKnown RBP21.88■■□□□ 1.09
TSC2-201ENST00000219476 TNNT2P45379 298 aaPredicted RBP21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms