RNA–Protein interactions for RNA: ENST00000498374.1

ATXN1-210, Transcript of ataxin 1, humanhuman

TSL 1 (best)

Gene ATXN1, Length 1,648 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN1-210ENST00000498374 AEBP2Q6ZN18 517 aaPredicted RBP21.61■■□□□ 1.05
ATXN1-210ENST00000498374 CHIC1Q5VXU3 224 aa20.28■□□□□ 0.84
ATXN1-210ENST00000498374 SENP3Q9H4L4 574 aaPredicted RBP18.61■□□□□ 0.57
ATXN1-210ENST00000498374 PHF23Q9BUL5 403 aaPredicted RBP18.23■□□□□ 0.51
ATXN1-210ENST00000498374 FOXD1Q16676 465 aa17.32■□□□□ 0.36
ATXN1-210ENST00000498374 POTEDQ86YR6 584 aa16.85■□□□□ 0.29
ATXN1-210ENST00000498374 MSH5O43196 834 aa16.49■□□□□ 0.23
ATXN1-210ENST00000498374 PIAS4Q8N2W9 510 aaPredicted RBP16.06■□□□□ 0.16
ATXN1-210ENST00000498374 PLPPR3Q6T4P5 718 aa15.88■□□□□ 0.13
ATXN1-210ENST00000498374 PPP6R1Q9UPN7 881 aa15.78■□□□□ 0.12
ATXN1-210ENST00000498374 ADRA2BP18089 450 aa15.69■□□□□ 0.1
ATXN1-210ENST00000498374 NISCHQ9Y2I1 1504 aa15.22■□□□□ 0.03
ATXN1-210ENST00000498374 DMRT2Q9Y5R5 561 aa14.67□□□□□ -0.06
ATXN1-210ENST00000498374 MAPK8IP2Q13387 824 aaPredicted RBP14.54□□□□□ -0.08
ATXN1-210ENST00000498374 SCAF1Q9H7N4 1312 aaKnown RBP14.5□□□□□ -0.09
ATXN1-210ENST00000498374 SLC24A1O60721 1099 aa14.43□□□□□ -0.1
ATXN1-210ENST00000498374 CACNB1Q02641 598 aaPredicted RBP14.36□□□□□ -0.11
ATXN1-210ENST00000498374 EHMT2Q96KQ7 1210 aa14.19□□□□□ -0.14
ATXN1-210ENST00000498374 RNF39Q9H2S5 420 aa13.99□□□□□ -0.17
ATXN1-210ENST00000498374 HOXD11P31277 338 aaPredicted RBP13.97□□□□□ -0.17
ATXN1-210ENST00000498374 DCAF8L1A6NGE4 600 aa13.96□□□□□ -0.17
ATXN1-210ENST00000498374 PPP4R3CPQ6ZMV5 832 aa13.81□□□□□ -0.2
ATXN1-210ENST00000498374 C1QBPQ07021 282 aaKnown RBP13.8□□□□□ -0.2
ATXN1-210ENST00000498374 RNF216Q9NWF9 866 aaPredicted RBP13.72□□□□□ -0.21
ATXN1-210ENST00000498374 CNKSR2Q8WXI2 1034 aa13.72□□□□□ -0.21
ATXN1-210ENST00000498374 DNAJC5BQ9UF47 199 aa13.7□□□□□ -0.22
ATXN1-210ENST00000498374 KCNA4P22459 653 aa13.46□□□□□ -0.26
ATXN1-210ENST00000498374 CSRNP3Q8WYN3 585 aa13.39□□□□□ -0.27
ATXN1-210ENST00000498374 RTN4Q9NQC3 1192 aaKnown RBP13.38□□□□□ -0.27
ATXN1-210ENST00000498374 AMER1Q5JTC6 1135 aaPredicted RBP13.28□□□□□ -0.28
ATXN1-210ENST00000498374 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.23□□□□□ -0.29
ATXN1-210ENST00000498374 CCDC180Q9P1Z9 1646 aa13.22□□□□□ -0.29
ATXN1-210ENST00000498374 NCBP3Q53F19 620 aaKnown RBP13.21□□□□□ -0.3
ATXN1-210ENST00000498374 POTEHQ6S545 545 aa13.1□□□□□ -0.31
ATXN1-210ENST00000498374 NPM3O75607 178 aaKnown RBP13.01□□□□□ -0.33
ATXN1-210ENST00000498374 SLC4A1APQ9BWU0 796 aaKnown RBP12.96□□□□□ -0.33
ATXN1-210ENST00000498374 ZCCHC6Q5VYS8 1495 aaKnown RBP12.94□□□□□ -0.34
ATXN1-210ENST00000498374 DSG3P32926 999 aa12.91□□□□□ -0.34
ATXN1-210ENST00000498374 U3KPZ7 1027 aaPredicted RBP12.91□□□□□ -0.34
ATXN1-210ENST00000498374 CAPN15O75808 1086 aa12.83□□□□□ -0.36
ATXN1-210ENST00000498374 SPINK5Q9NQ38 1064 aaPredicted RBP12.81□□□□□ -0.36
ATXN1-210ENST00000498374 DCAF1Q9Y4B6 1507 aa12.72□□□□□ -0.37
ATXN1-210ENST00000498374 DAXXQ9UER7 740 aaPredicted RBP12.7□□□□□ -0.38
ATXN1-210ENST00000498374 APLP2Q06481 763 aa12.62□□□□□ -0.39
ATXN1-210ENST00000498374 ZNF219Q9P2Y4 722 aaPredicted RBP12.56□□□□□ -0.4
ATXN1-210ENST00000498374 SHROOM4Q9ULL8 1493 aa12.55□□□□□ -0.4
ATXN1-210ENST00000498374 PRKCSHP14314 528 aaPredicted RBP12.51□□□□□ -0.41
ATXN1-210ENST00000498374 TRHP20396 242 aaPredicted RBP12.49□□□□□ -0.41
ATXN1-210ENST00000498374 SLC4A2P04920 1241 aa12.48□□□□□ -0.41
ATXN1-210ENST00000498374 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.47□□□□□ -0.41
ATXN1-210ENST00000498374 HNRNPUL2Q1KMD3 747 aaKnown RBP12.47□□□□□ -0.41
ATXN1-210ENST00000498374 ABCB7O75027 752 aa12.44□□□□□ -0.42
ATXN1-210ENST00000498374 ZBTB22O15209 634 aa12.42□□□□□ -0.42
ATXN1-210ENST00000498374 RBM42Q9BTD8 480 aaKnown RBP12.42□□□□□ -0.42
ATXN1-210ENST00000498374 MYO15BQ96JP2 1530 aa12.39□□□□□ -0.43
ATXN1-210ENST00000498374 SAMD1Q6SPF0 538 aaPredicted RBP12.35□□□□□ -0.43
ATXN1-210ENST00000498374 SUPT5HO00267 1087 aaKnown RBP12.33□□□□□ -0.43
ATXN1-210ENST00000498374 TAOK2Q9UL54 1235 aa12.3□□□□□ -0.44
ATXN1-210ENST00000498374 BCANQ96GW7 911 aa12.29□□□□□ -0.44
ATXN1-210ENST00000498374 ABCC9O60706 1549 aa12.29□□□□□ -0.44
ATXN1-210ENST00000498374 ARXQ96QS3 562 aa12.27□□□□□ -0.44
ATXN1-210ENST00000498374 CHRDL2Q6WN34 429 aa12.26□□□□□ -0.45
ATXN1-210ENST00000498374 FOXD4L1Q9NU39 408 aa12.25□□□□□ -0.45
ATXN1-210ENST00000498374 PLCB2Q00722 1185 aa12.19□□□□□ -0.46
ATXN1-210ENST00000498374 TIMELESSQ9UNS1 1208 aa12.13□□□□□ -0.47
ATXN1-210ENST00000498374 DCAF8L2P0C7V8 631 aa12.08□□□□□ -0.48
ATXN1-210ENST00000498374 NACADO15069 1562 aa12.08□□□□□ -0.48
ATXN1-210ENST00000498374 TPRNQ4KMQ1 711 aa12.08□□□□□ -0.48
ATXN1-210ENST00000498374 SP7Q8TDD2 431 aaPredicted RBP12.08□□□□□ -0.48
ATXN1-210ENST00000498374 POLA2Q14181 598 aa12.07□□□□□ -0.48
ATXN1-210ENST00000498374 MYCNP04198 464 aaPredicted RBP12.04□□□□□ -0.48
ATXN1-210ENST00000498374 SCRIBQ14160 1630 aa12.03□□□□□ -0.48
ATXN1-210ENST00000498374 HAP1P54257 671 aaPredicted RBP12.03□□□□□ -0.48
ATXN1-210ENST00000498374 TULP1O00294 542 aaPredicted RBP12.01□□□□□ -0.49
ATXN1-210ENST00000498374 AKT1S1Q96B36 256 aa12.01□□□□□ -0.49
ATXN1-210ENST00000498374 FKBP8Q14318 412 aa12□□□□□ -0.49
ATXN1-210ENST00000498374 RB1CC1Q8TDY2 1594 aa12□□□□□ -0.49
ATXN1-210ENST00000498374 RSF1Q96T23 1441 aaPredicted RBP11.94□□□□□ -0.5
ATXN1-210ENST00000498374 HRCP23327 699 aa11.93□□□□□ -0.5
ATXN1-210ENST00000498374 ZBTB12Q9Y330 459 aaPredicted RBP11.92□□□□□ -0.5
ATXN1-210ENST00000498374 HOMEZQ8IX15 550 aa11.89□□□□□ -0.51
ATXN1-210ENST00000498374 VSIG10Q8N0Z9 540 aa11.86□□□□□ -0.51
ATXN1-210ENST00000498374 PIP4P2Q8N4L2 257 aa11.85□□□□□ -0.51
ATXN1-210ENST00000498374 REM2Q8IYK8 340 aaPredicted RBP11.84□□□□□ -0.51
ATXN1-210ENST00000498374 BAZ1AQ9NRL2 1556 aaPredicted RBP11.82□□□□□ -0.52
ATXN1-210ENST00000498374 GTF3C3Q9Y5Q9 886 aa11.8□□□□□ -0.52
ATXN1-210ENST00000498374 ATXN8OSP0DMR3 200 aa11.78□□□□□ -0.52
ATXN1-210ENST00000498374 ERICH6Q7L0X2 663 aa11.78□□□□□ -0.52
ATXN1-210ENST00000498374 FXR2P51116 673 aaKnown RBP eCLIP11.75□□□□□ -0.53
ATXN1-210ENST00000498374 HAX1O00165 279 aa11.74□□□□□ -0.53
ATXN1-210ENST00000498374 RANGAP1P46060 587 aaPredicted RBP11.73□□□□□ -0.53
ATXN1-210ENST00000498374 ATF5Q9Y2D1 282 aaPredicted RBP11.73□□□□□ -0.53
ATXN1-210ENST00000498374 EIF4G1Q04637 1599 aaKnown RBP11.72□□□□□ -0.53
ATXN1-210ENST00000498374 PCGF6Q9BYE7 350 aa11.71□□□□□ -0.53
ATXN1-210ENST00000498374 MROH2BQ7Z745 1585 aa11.71□□□□□ -0.54
ATXN1-210ENST00000498374 PITPNM1O00562 1244 aa11.7□□□□□ -0.54
ATXN1-210ENST00000498374 TRIM26Q12899 539 aaPredicted RBP11.7□□□□□ -0.54
ATXN1-210ENST00000498374 OSCARQ8IYS5 282 aa11.69□□□□□ -0.54
ATXN1-210ENST00000498374 WIZO95785 1651 aa11.68□□□□□ -0.54
ATXN1-210ENST00000498374 TOP2AP11388 1531 aaKnown RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms