RNA–Protein interactions for RNA: ENST00000439673.6

TSC2-207, Transcript of TSC complex subunit 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TSC2, Length 5,287 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-207ENST00000439673 DCAF8L2P0C7V8 631 aa27.64■■■□□ 2.02
TSC2-207ENST00000439673 SUPT5HO00267 1087 aaKnown RBP26.61■■□□□ 1.85
TSC2-207ENST00000439673 NISCHQ9Y2I1 1504 aa26.44■■□□□ 1.82
TSC2-207ENST00000439673 SHROOM4Q9ULL8 1493 aa25.95■■□□□ 1.74
TSC2-207ENST00000439673 PELP1Q8IZL8 1130 aaKnown RBP25.94■■□□□ 1.74
TSC2-207ENST00000439673 EHMT2Q96KQ7 1210 aa25.58■■□□□ 1.69
TSC2-207ENST00000439673 APLP2Q06481 763 aa25.46■■□□□ 1.67
TSC2-207ENST00000439673 PCGF6Q9BYE7 350 aa25.2■■□□□ 1.62
TSC2-207ENST00000439673 FAM9AQ8IZU1 332 aaPredicted RBP25.07■■□□□ 1.6
TSC2-207ENST00000439673 ZEB1P37275 1124 aaPredicted RBP25.06■■□□□ 1.6
TSC2-207ENST00000439673 CENPBP07199 599 aaPredicted RBP25.03■■□□□ 1.6
TSC2-207ENST00000439673 TTBK1Q5TCY1 1321 aaPredicted RBP24.82■■□□□ 1.56
TSC2-207ENST00000439673 CCER1Q8TC90 406 aaPredicted RBP24.75■■□□□ 1.55
TSC2-207ENST00000439673 ERICH6Q7L0X2 663 aa24.73■■□□□ 1.55
TSC2-207ENST00000439673 TRIM41Q8WV44 630 aa24.72■■□□□ 1.55
TSC2-207ENST00000439673 MYT1Q01538 1121 aa24.52■■□□□ 1.52
TSC2-207ENST00000439673 RANGAP1P46060 587 aaPredicted RBP24.44■■□□□ 1.5
TSC2-207ENST00000439673 NEFLP07196 543 aa24.4■■□□□ 1.5
TSC2-207ENST00000439673 UBTFP17480 764 aaKnown RBP24.39■■□□□ 1.5
TSC2-207ENST00000439673 ATP1B4Q9UN42 357 aaPredicted RBP24.28■■□□□ 1.48
TSC2-207ENST00000439673 TRIM26Q12899 539 aaPredicted RBP24.2■■□□□ 1.47
TSC2-207ENST00000439673 YTHDC1Q96MU7 727 aaKnown RBP24.2■■□□□ 1.47
TSC2-207ENST00000439673 HRCP23327 699 aa24.09■■□□□ 1.45
TSC2-207ENST00000439673 PPARGC1BQ86YN6 1023 aaKnown RBP23.93■■□□□ 1.42
TSC2-207ENST00000439673 CHIC1Q5VXU3 224 aa23.74■■□□□ 1.39
TSC2-207ENST00000439673 LOC105371045A0A1W2PR82 267 aa23.65■■□□□ 1.38
TSC2-207ENST00000439673 DAXXQ9UER7 740 aaPredicted RBP23.64■■□□□ 1.38
TSC2-207ENST00000439673 ITGAEP38570 1179 aa23.58■■□□□ 1.37
TSC2-207ENST00000439673 HNRNPUL2Q1KMD3 747 aaKnown RBP23.54■■□□□ 1.36
TSC2-207ENST00000439673 POLR3GLQ9BT43 218 aa23.45■■□□□ 1.34
TSC2-207ENST00000439673 DIEXFQ68CQ4 756 aaKnown RBP23.41■■□□□ 1.34
TSC2-207ENST00000439673 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.38■■□□□ 1.33
TSC2-207ENST00000439673 MYT1LQ9UL68 1186 aa23.25■■□□□ 1.31
TSC2-207ENST00000439673 RTL5Q5HYW3 569 aaPredicted RBP23.22■■□□□ 1.31
TSC2-207ENST00000439673 CNGB1Q14028 1251 aaPredicted RBP23.15■■□□□ 1.3
TSC2-207ENST00000439673 ZNF316A6NFI3 1004 aaPredicted RBP23.08■■□□□ 1.29
TSC2-207ENST00000439673 CLSPNQ9HAW4 1339 aa23.04■■□□□ 1.28
TSC2-207ENST00000439673 FAM50AQ14320 339 aaKnown RBP23.01■■□□□ 1.27
TSC2-207ENST00000439673 GTF3C3Q9Y5Q9 886 aa22.99■■□□□ 1.27
TSC2-207ENST00000439673 SLC4A1APQ9BWU0 796 aaKnown RBP22.91■■□□□ 1.26
TSC2-207ENST00000439673 ANP32CO43423 234 aa22.9■■□□□ 1.26
TSC2-207ENST00000439673 TRIM52Q96A61 297 aa22.9■■□□□ 1.26
TSC2-207ENST00000439673 NEUROD1Q13562 356 aa22.87■■□□□ 1.25
TSC2-207ENST00000439673 CDK11AQ9UQ88 783 aaPredicted RBP22.84■■□□□ 1.25
TSC2-207ENST00000439673 BCANQ96GW7 911 aa22.82■■□□□ 1.24
TSC2-207ENST00000439673 ACIN1Q9UKV3 1341 aaKnown RBP22.73■■□□□ 1.23
TSC2-207ENST00000439673 ZNF326Q5BKZ1 582 aaKnown RBP22.6■■□□□ 1.21
TSC2-207ENST00000439673 ZBTB47Q9UFB7 747 aaPredicted RBP22.57■■□□□ 1.2
TSC2-207ENST00000439673 CSRNP3Q8WYN3 585 aa22.53■■□□□ 1.2
TSC2-207ENST00000439673 PABPN1Q86U42 306 aaKnown RBP eCLIP22.52■■□□□ 1.28e-7■■■□□ 18.8
TSC2-207ENST00000439673 ANP32AP39687 249 aaKnown RBP22.48■■□□□ 1.19
TSC2-207ENST00000439673 ABCC9O60706 1549 aa22.46■■□□□ 1.19
TSC2-207ENST00000439673 CANXP27824 592 aaKnown RBP22.44■■□□□ 1.18
TSC2-207ENST00000439673 DCAF1Q9Y4B6 1507 aa22.34■■□□□ 1.17
TSC2-207ENST00000439673 NEFMP07197 916 aa22.34■■□□□ 1.17
TSC2-207ENST00000439673 FKBP8Q14318 412 aa22.27■■□□□ 1.16
TSC2-207ENST00000439673 P3H3Q8IVL6 736 aa22.26■■□□□ 1.15
TSC2-207ENST00000439673 TONSLQ96HA7 1378 aa22.23■■□□□ 1.15
TSC2-207ENST00000439673 FBLN2P98095 1184 aa22.22■■□□□ 1.15
TSC2-207ENST00000439673 NPM2Q86SE8 214 aaKnown RBP22.19■■□□□ 1.14
TSC2-207ENST00000439673 HNRNPUQ00839 825 aaKnown RBP eCLIP22.16■■□□□ 1.14
TSC2-207ENST00000439673 DDX10Q13206 875 aaKnown RBP22.11■■□□□ 1.13
TSC2-207ENST00000439673 BCL11AQ9H165 835 aa22.11■■□□□ 1.13
TSC2-207ENST00000439673 ZNF777Q9ULD5 760 aaPredicted RBP22.1■■□□□ 1.13
TSC2-207ENST00000439673 ARID3CA6NKF2 412 aa22.09■■□□□ 1.13
TSC2-207ENST00000439673 ANP32BQ92688 251 aaKnown RBP22.09■■□□□ 1.13
TSC2-207ENST00000439673 SLC24A1O60721 1099 aa22.08■■□□□ 1.13
TSC2-207ENST00000439673 UPF2Q9HAU5 1272 aaKnown RBP22.07■■□□□ 1.12
TSC2-207ENST00000439673 FAM9BQ8IZU0 186 aa22.03■■□□□ 1.12
TSC2-207ENST00000439673 HSP90AA1P07900 732 aaKnown RBP22■■□□□ 1.11
TSC2-207ENST00000439673 CCDC136Q96JN2 1154 aa21.98■■□□□ 1.11
TSC2-207ENST00000439673 EIF5BO60841 1220 aaKnown RBP21.97■■□□□ 1.11
TSC2-207ENST00000439673 TMC1Q8TDI8 760 aa21.94■■□□□ 1.1
TSC2-207ENST00000439673 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.94■■□□□ 1.1
TSC2-207ENST00000439673 ZCCHC6Q5VYS8 1495 aaKnown RBP21.9■■□□□ 1.1
TSC2-207ENST00000439673 SCAF1Q9H7N4 1312 aaKnown RBP21.89■■□□□ 1.09
TSC2-207ENST00000439673 MRS2Q9HD23 443 aa21.87■■□□□ 1.09
TSC2-207ENST00000439673 MIER1Q8N108 512 aa21.86■■□□□ 1.09
TSC2-207ENST00000439673 SCRIBQ14160 1630 aa21.86■■□□□ 1.09
TSC2-207ENST00000439673 GLIPR1L2Q4G1C9 344 aa21.84■■□□□ 1.09
TSC2-207ENST00000439673 SALL2Q9Y467 1007 aaPredicted RBP21.82■■□□□ 1.08
TSC2-207ENST00000439673 CHGAP10645 457 aaKnown RBP21.79■■□□□ 1.08
TSC2-207ENST00000439673 WDR43Q15061 677 aaKnown RBP eCLIP21.79■■□□□ 1.08
TSC2-207ENST00000439673 NBR1Q14596 966 aa21.78■■□□□ 1.08
TSC2-207ENST00000439673 CHIC2Q9UKJ5 165 aa21.78■■□□□ 1.08
TSC2-207ENST00000439673 ESF1Q9H501 851 aaKnown RBP21.74■■□□□ 1.07
TSC2-207ENST00000439673 CLIP1P30622 1438 aa21.74■■□□□ 1.07
TSC2-207ENST00000439673 MTUS2Q5JR59 1369 aa21.73■■□□□ 1.07
TSC2-207ENST00000439673 EIF4G2P78344 907 aaKnown RBP eCLIP21.72■■□□□ 1.07
TSC2-207ENST00000439673 STAG3Q9UJ98 1225 aa21.72■■□□□ 1.07
TSC2-207ENST00000439673 TSPY4P0CV99 314 aa21.71■■□□□ 1.07
TSC2-207ENST00000439673 TSPY10P0CW01 314 aa21.71■■□□□ 1.07
TSC2-207ENST00000439673 EEA1Q15075 1411 aa21.66■■□□□ 1.06
TSC2-207ENST00000439673 IRX6P78412 446 aaPredicted RBP21.64■■□□□ 1.05
TSC2-207ENST00000439673 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.63■■□□□ 1.053e-6■■■□□ 15.2
TSC2-207ENST00000439673 DDRGK1Q96HY6 314 aa21.63■■□□□ 1.05
TSC2-207ENST00000439673 KDM2AQ9Y2K7 1162 aa21.62■■□□□ 1.05
TSC2-207ENST00000439673 NPM1P06748 294 aaKnown RBP eCLIP21.59■■□□□ 1.05
TSC2-207ENST00000439673 HIRIP3Q9BW71 556 aaPredicted RBP21.58■■□□□ 1.05
TSC2-207ENST00000439673 BECN1Q14457 450 aa21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms