RNA–Protein interactions for RNA: ENST00000470188.5

CDHR3-207, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 2,199 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-207ENST00000470188 NISCHQ9Y2I1 1504 aa42.65■■■■■ 4.42
CDHR3-207ENST00000470188 CCDC180Q9P1Z9 1646 aa36.55■■■■□ 3.44
CDHR3-207ENST00000470188 ZCCHC6Q5VYS8 1495 aaKnown RBP36.04■■■■□ 3.36
CDHR3-207ENST00000470188 SHROOM4Q9ULL8 1493 aa35.87■■■■□ 3.33
CDHR3-207ENST00000470188 DCAF8L2P0C7V8 631 aa35.22■■■■□ 3.23
CDHR3-207ENST00000470188 DCAF1Q9Y4B6 1507 aa35.13■■■■□ 3.21
CDHR3-207ENST00000470188 SUPT5HO00267 1087 aaKnown RBP35.02■■■■□ 3.2
CDHR3-207ENST00000470188 ABCC9O60706 1549 aa34.46■■■■□ 3.11
CDHR3-207ENST00000470188 MYO15BQ96JP2 1530 aa34.27■■■■□ 3.08
CDHR3-207ENST00000470188 SCRIBQ14160 1630 aa34.02■■■■□ 3.04
CDHR3-207ENST00000470188 CHIC1Q5VXU3 224 aa33.96■■■■□ 3.03
CDHR3-207ENST00000470188 NACADO15069 1562 aa33.84■■■■□ 3.01
CDHR3-207ENST00000470188 RSF1Q96T23 1441 aaPredicted RBP33.57■■■□□ 2.97
CDHR3-207ENST00000470188 RB1CC1Q8TDY2 1594 aa33.5■■■□□ 2.95
CDHR3-207ENST00000470188 CECR2Q9BXF3 1484 aa33.19■■■□□ 2.9
CDHR3-207ENST00000470188 MROH2BQ7Z745 1585 aa33.08■■■□□ 2.89
CDHR3-207ENST00000470188 UNC13AQ9UPW8 1703 aa32.87■■■□□ 2.85
CDHR3-207ENST00000470188 WIZO95785 1651 aa32.87■■■□□ 2.85
CDHR3-207ENST00000470188 LOC105371045A0A1W2PR82 267 aa32.83■■■□□ 2.85
CDHR3-207ENST00000470188 HRCP23327 699 aa32.83■■■□□ 2.85
CDHR3-207ENST00000470188 BAZ1AQ9NRL2 1556 aaPredicted RBP32.82■■■□□ 2.85
CDHR3-207ENST00000470188 TRIM41Q8WV44 630 aa32.75■■■□□ 2.83
CDHR3-207ENST00000470188 SMARCA4P51532 1647 aa32.56■■■□□ 2.8
CDHR3-207ENST00000470188 BICRAQ9NZM4 1560 aa32.56■■■□□ 2.8
CDHR3-207ENST00000470188 PABPN1Q86U42 306 aaKnown RBP eCLIP32.49■■■□□ 2.79
CDHR3-207ENST00000470188 PCGF6Q9BYE7 350 aa32.46■■■□□ 2.79
CDHR3-207ENST00000470188 TOP2AP11388 1531 aaKnown RBP32.45■■■□□ 2.79
CDHR3-207ENST00000470188 EIF4G1Q04637 1599 aaKnown RBP32.36■■■□□ 2.77
CDHR3-207ENST00000470188 FAM9AQ8IZU1 332 aaPredicted RBP32.33■■■□□ 2.77
CDHR3-207ENST00000470188 CCDC88BA6NC98 1476 aa32.23■■■□□ 2.75
CDHR3-207ENST00000470188 SMARCA2P51531 1590 aa32.23■■■□□ 2.75
CDHR3-207ENST00000470188 TRIM26Q12899 539 aaPredicted RBP32.05■■■□□ 2.72
CDHR3-207ENST00000470188 PEG3Q9GZU2 1588 aa32.03■■■□□ 2.72
CDHR3-207ENST00000470188 ABCC8Q09428 1581 aa31.98■■■□□ 2.71
CDHR3-207ENST00000470188 EHMT2Q96KQ7 1210 aa31.96■■■□□ 2.71
CDHR3-207ENST00000470188 PPARGC1BQ86YN6 1023 aaKnown RBP31.83■■■□□ 2.69
CDHR3-207ENST00000470188 ATAD2BQ9ULI0 1458 aa31.8■■■□□ 2.68
CDHR3-207ENST00000470188 BAZ1BQ9UIG0 1483 aaKnown RBP31.7■■■□□ 2.67
CDHR3-207ENST00000470188 SOGA1O94964 1423 aa31.6■■■□□ 2.65
CDHR3-207ENST00000470188 WRNQ14191 1432 aaPredicted RBP eCLIP31.56■■■□□ 2.64
CDHR3-207ENST00000470188 EEA1Q15075 1411 aa31.56■■■□□ 2.64
CDHR3-207ENST00000470188 RUSC2Q8N2Y8 1516 aa31.44■■■□□ 2.62
CDHR3-207ENST00000470188 CSRNP3Q8WYN3 585 aa31.43■■■□□ 2.62
CDHR3-207ENST00000470188 SYNJ1O43426 1573 aa31.4■■■□□ 2.62
CDHR3-207ENST00000470188 TNIKQ9UKE5 1360 aa31.37■■■□□ 2.61
CDHR3-207ENST00000470188 CEP162Q5TB80 1403 aa31.35■■■□□ 2.61
CDHR3-207ENST00000470188 ZEB1P37275 1124 aaPredicted RBP31.33■■■□□ 2.61
CDHR3-207ENST00000470188 HMGXB3Q12766 1538 aa31.29■■■□□ 2.6
CDHR3-207ENST00000470188 NCAPD3P42695 1498 aa31.29■■■□□ 2.6
CDHR3-207ENST00000470188 GOLGA3Q08378 1498 aa31.27■■■□□ 2.6
CDHR3-207ENST00000470188 UBTFP17480 764 aaKnown RBP31.22■■■□□ 2.59
CDHR3-207ENST00000470188 CC2D2AQ9P2K1 1620 aa31.16■■■□□ 2.58
CDHR3-207ENST00000470188 CEP164Q9UPV0 1460 aa31.14■■■□□ 2.58
CDHR3-207ENST00000470188 KIF21BO75037 1637 aa31.12■■■□□ 2.57
CDHR3-207ENST00000470188 TOP2BQ02880 1626 aa31.11■■■□□ 2.57
CDHR3-207ENST00000470188 PELP1Q8IZL8 1130 aaKnown RBP31.09■■■□□ 2.57
CDHR3-207ENST00000470188 BIVM-ERCC5R4GMW8 1640 aa31.02■■■□□ 2.56
CDHR3-207ENST00000470188 CFTRP13569 1480 aa30.92■■■□□ 2.54
CDHR3-207ENST00000470188 RAPGEF2Q9Y4G8 1499 aa30.88■■■□□ 2.53
CDHR3-207ENST00000470188 TTBK1Q5TCY1 1321 aaPredicted RBP30.87■■■□□ 2.53
CDHR3-207ENST00000470188 CLIP1P30622 1438 aa30.85■■■□□ 2.53
CDHR3-207ENST00000470188 CUX1P39880 1505 aa30.85■■■□□ 2.53
CDHR3-207ENST00000470188 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.73■■■□□ 2.51
CDHR3-207ENST00000470188 ERICH3Q5RHP9 1530 aa30.7■■■□□ 2.51
CDHR3-207ENST00000470188 VPS8Q8N3P4 1428 aa30.7■■■□□ 2.5
CDHR3-207ENST00000470188 PRDM2Q13029 1718 aa30.7■■■□□ 2.5
CDHR3-207ENST00000470188 CCER1Q8TC90 406 aaPredicted RBP30.69■■■□□ 2.5
CDHR3-207ENST00000470188 PRXQ9BXM0 1461 aa30.69■■■□□ 2.5
CDHR3-207ENST00000470188 KIF27Q86VH2 1401 aa30.65■■■□□ 2.5
CDHR3-207ENST00000470188 DNAJC5BQ9UF47 199 aa30.62■■■□□ 2.49
CDHR3-207ENST00000470188 CADPSQ9ULU8 1353 aa30.62■■■□□ 2.49
CDHR3-207ENST00000470188 SCAF1Q9H7N4 1312 aaKnown RBP30.6■■■□□ 2.49
CDHR3-207ENST00000470188 RANGAP1P46060 587 aaPredicted RBP30.56■■■□□ 2.48
CDHR3-207ENST00000470188 APLP2Q06481 763 aa30.5■■■□□ 2.47
CDHR3-207ENST00000470188 ARAP1Q96P48 1450 aa30.4■■■□□ 2.46
CDHR3-207ENST00000470188 CUX2O14529 1486 aa30.39■■■□□ 2.46
CDHR3-207ENST00000470188 FGD5Q6ZNL6 1462 aa30.35■■■□□ 2.45
CDHR3-207ENST00000470188 FANCD2Q9BXW9 1451 aa30.32■■■□□ 2.44
CDHR3-207ENST00000470188 IGF1RP08069 1367 aa30.3■■■□□ 2.44
CDHR3-207ENST00000470188 HNRNPUL2Q1KMD3 747 aaKnown RBP30.26■■■□□ 2.43
CDHR3-207ENST00000470188 NESP48681 1621 aa30.22■■■□□ 2.43
CDHR3-207ENST00000470188 ARHGAP35Q9NRY4 1499 aa30.2■■■□□ 2.42
CDHR3-207ENST00000470188 CARMIL1Q5VZK9 1371 aa30.17■■■□□ 2.42
CDHR3-207ENST00000470188 DNMBPQ6XZF7 1577 aa30.16■■■□□ 2.42
CDHR3-207ENST00000470188 ACIN1Q9UKV3 1341 aaKnown RBP30.16■■■□□ 2.42
CDHR3-207ENST00000470188 LAMC3Q9Y6N6 1575 aa30.12■■■□□ 2.41
CDHR3-207ENST00000470188 KANK4Q5T7N3 995 aaPredicted RBP30.09■■■□□ 2.41
CDHR3-207ENST00000470188 TOPBP1Q92547 1522 aa30.09■■■□□ 2.41
CDHR3-207ENST00000470188 ABCA10Q8WWZ4 1543 aa30.04■■■□□ 2.4
CDHR3-207ENST00000470188 POLA1P09884 1462 aaPredicted RBP30.04■■■□□ 2.4
CDHR3-207ENST00000470188 RAD54L2Q9Y4B4 1467 aa30.03■■■□□ 2.4
CDHR3-207ENST00000470188 NEUROD1Q13562 356 aa29.97■■■□□ 2.39
CDHR3-207ENST00000470188 CENPBP07199 599 aaPredicted RBP29.95■■■□□ 2.38
CDHR3-207ENST00000470188 RRBP1Q9P2E9 1410 aaKnown RBP29.94■■■□□ 2.38
CDHR3-207ENST00000470188 DIEXFQ68CQ4 756 aaKnown RBP29.91■■■□□ 2.38
CDHR3-207ENST00000470188 PDS5BQ9NTI5 1447 aa29.91■■■□□ 2.38
CDHR3-207ENST00000470188 URB2Q14146 1524 aaKnown RBP29.88■■■□□ 2.37
CDHR3-207ENST00000470188 MAP3K1Q13233 1512 aa29.86■■■□□ 2.37
CDHR3-207ENST00000470188 CUL7Q14999 1698 aa29.85■■■□□ 2.37
CDHR3-207ENST00000470188 TIAM1Q13009 1591 aa29.84■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms