RNA–Protein interactions for RNA: ENST00000470188.5

CDHR3-207, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 2,199 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-207ENST00000470188 NISCHQ9Y2I1 1504 aa42.65■■■■■ 4.42
CDHR3-207ENST00000470188 CCDC180Q9P1Z9 1646 aa36.55■■■■□ 3.44
CDHR3-207ENST00000470188 ZCCHC6Q5VYS8 1495 aaKnown RBP36.04■■■■□ 3.36
CDHR3-207ENST00000470188 SHROOM4Q9ULL8 1493 aa35.87■■■■□ 3.33
CDHR3-207ENST00000470188 DCAF8L2P0C7V8 631 aa35.22■■■■□ 3.23
CDHR3-207ENST00000470188 DCAF1Q9Y4B6 1507 aa35.13■■■■□ 3.21
CDHR3-207ENST00000470188 SUPT5HO00267 1087 aaKnown RBP35.02■■■■□ 3.2
CDHR3-207ENST00000470188 ABCC9O60706 1549 aa34.46■■■■□ 3.11
CDHR3-207ENST00000470188 MYO15BQ96JP2 1530 aa34.27■■■■□ 3.08
CDHR3-207ENST00000470188 SCRIBQ14160 1630 aa34.02■■■■□ 3.04
CDHR3-207ENST00000470188 CHIC1Q5VXU3 224 aa33.96■■■■□ 3.03
CDHR3-207ENST00000470188 NACADO15069 1562 aa33.84■■■■□ 3.01
CDHR3-207ENST00000470188 RSF1Q96T23 1441 aaPredicted RBP33.57■■■□□ 2.97
CDHR3-207ENST00000470188 RB1CC1Q8TDY2 1594 aa33.5■■■□□ 2.95
CDHR3-207ENST00000470188 CECR2Q9BXF3 1484 aa33.19■■■□□ 2.9
CDHR3-207ENST00000470188 MROH2BQ7Z745 1585 aa33.08■■■□□ 2.89
CDHR3-207ENST00000470188 UNC13AQ9UPW8 1703 aa32.87■■■□□ 2.85
CDHR3-207ENST00000470188 WIZO95785 1651 aa32.87■■■□□ 2.85
CDHR3-207ENST00000470188 LOC105371045A0A1W2PR82 267 aa32.83■■■□□ 2.85
CDHR3-207ENST00000470188 HRCP23327 699 aa32.83■■■□□ 2.85
CDHR3-207ENST00000470188 BAZ1AQ9NRL2 1556 aaPredicted RBP32.82■■■□□ 2.85
CDHR3-207ENST00000470188 TRIM41Q8WV44 630 aa32.75■■■□□ 2.83
CDHR3-207ENST00000470188 SMARCA4P51532 1647 aa32.56■■■□□ 2.8
CDHR3-207ENST00000470188 BICRAQ9NZM4 1560 aa32.56■■■□□ 2.8
CDHR3-207ENST00000470188 PABPN1Q86U42 306 aaKnown RBP eCLIP32.49■■■□□ 2.79
CDHR3-207ENST00000470188 PCGF6Q9BYE7 350 aa32.46■■■□□ 2.79
CDHR3-207ENST00000470188 TOP2AP11388 1531 aaKnown RBP32.45■■■□□ 2.79
CDHR3-207ENST00000470188 EIF4G1Q04637 1599 aaKnown RBP32.36■■■□□ 2.77
CDHR3-207ENST00000470188 FAM9AQ8IZU1 332 aaPredicted RBP32.33■■■□□ 2.77
CDHR3-207ENST00000470188 CCDC88BA6NC98 1476 aa32.23■■■□□ 2.75
CDHR3-207ENST00000470188 SMARCA2P51531 1590 aa32.23■■■□□ 2.75
CDHR3-207ENST00000470188 TRIM26Q12899 539 aaPredicted RBP32.05■■■□□ 2.72
CDHR3-207ENST00000470188 PEG3Q9GZU2 1588 aa32.03■■■□□ 2.72
CDHR3-207ENST00000470188 ABCC8Q09428 1581 aa31.98■■■□□ 2.71
CDHR3-207ENST00000470188 EHMT2Q96KQ7 1210 aa31.96■■■□□ 2.71
CDHR3-207ENST00000470188 PPARGC1BQ86YN6 1023 aaKnown RBP31.83■■■□□ 2.69
CDHR3-207ENST00000470188 ATAD2BQ9ULI0 1458 aa31.8■■■□□ 2.68
CDHR3-207ENST00000470188 BAZ1BQ9UIG0 1483 aaKnown RBP31.7■■■□□ 2.67
CDHR3-207ENST00000470188 SOGA1O94964 1423 aa31.6■■■□□ 2.65
CDHR3-207ENST00000470188 WRNQ14191 1432 aaPredicted RBP eCLIP31.56■■■□□ 2.64
CDHR3-207ENST00000470188 EEA1Q15075 1411 aa31.56■■■□□ 2.64
CDHR3-207ENST00000470188 RUSC2Q8N2Y8 1516 aa31.44■■■□□ 2.62
CDHR3-207ENST00000470188 CSRNP3Q8WYN3 585 aa31.43■■■□□ 2.62
CDHR3-207ENST00000470188 SYNJ1O43426 1573 aa31.4■■■□□ 2.62
CDHR3-207ENST00000470188 TNIKQ9UKE5 1360 aa31.37■■■□□ 2.61
CDHR3-207ENST00000470188 CEP162Q5TB80 1403 aa31.35■■■□□ 2.61
CDHR3-207ENST00000470188 ZEB1P37275 1124 aaPredicted RBP31.33■■■□□ 2.61
CDHR3-207ENST00000470188 HMGXB3Q12766 1538 aa31.29■■■□□ 2.6
CDHR3-207ENST00000470188 NCAPD3P42695 1498 aa31.29■■■□□ 2.6
CDHR3-207ENST00000470188 GOLGA3Q08378 1498 aa31.27■■■□□ 2.6
CDHR3-207ENST00000470188 UBTFP17480 764 aaKnown RBP31.22■■■□□ 2.59
CDHR3-207ENST00000470188 CC2D2AQ9P2K1 1620 aa31.16■■■□□ 2.58
CDHR3-207ENST00000470188 CEP164Q9UPV0 1460 aa31.14■■■□□ 2.58
CDHR3-207ENST00000470188 KIF21BO75037 1637 aa31.12■■■□□ 2.57
CDHR3-207ENST00000470188 TOP2BQ02880 1626 aa31.11■■■□□ 2.57
CDHR3-207ENST00000470188 PELP1Q8IZL8 1130 aaKnown RBP31.09■■■□□ 2.57
CDHR3-207ENST00000470188 BIVM-ERCC5R4GMW8 1640 aa31.02■■■□□ 2.56
CDHR3-207ENST00000470188 CFTRP13569 1480 aa30.92■■■□□ 2.54
CDHR3-207ENST00000470188 RAPGEF2Q9Y4G8 1499 aa30.88■■■□□ 2.53
CDHR3-207ENST00000470188 TTBK1Q5TCY1 1321 aaPredicted RBP30.87■■■□□ 2.53
CDHR3-207ENST00000470188 CLIP1P30622 1438 aa30.85■■■□□ 2.53
CDHR3-207ENST00000470188 CUX1P39880 1505 aa30.85■■■□□ 2.53
CDHR3-207ENST00000470188 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.73■■■□□ 2.51
CDHR3-207ENST00000470188 ERICH3Q5RHP9 1530 aa30.7■■■□□ 2.51
CDHR3-207ENST00000470188 VPS8Q8N3P4 1428 aa30.7■■■□□ 2.5
CDHR3-207ENST00000470188 PRDM2Q13029 1718 aa30.7■■■□□ 2.5
CDHR3-207ENST00000470188 CCER1Q8TC90 406 aaPredicted RBP30.69■■■□□ 2.5
CDHR3-207ENST00000470188 PRXQ9BXM0 1461 aa30.69■■■□□ 2.5
CDHR3-207ENST00000470188 KIF27Q86VH2 1401 aa30.65■■■□□ 2.5
CDHR3-207ENST00000470188 DNAJC5BQ9UF47 199 aa30.62■■■□□ 2.49
CDHR3-207ENST00000470188 CADPSQ9ULU8 1353 aa30.62■■■□□ 2.49
CDHR3-207ENST00000470188 SCAF1Q9H7N4 1312 aaKnown RBP30.6■■■□□ 2.49
CDHR3-207ENST00000470188 RANGAP1P46060 587 aaPredicted RBP30.56■■■□□ 2.48
CDHR3-207ENST00000470188 APLP2Q06481 763 aa30.5■■■□□ 2.47
CDHR3-207ENST00000470188 ARAP1Q96P48 1450 aa30.4■■■□□ 2.46
CDHR3-207ENST00000470188 CUX2O14529 1486 aa30.39■■■□□ 2.46
CDHR3-207ENST00000470188 FGD5Q6ZNL6 1462 aa30.35■■■□□ 2.45
CDHR3-207ENST00000470188 FANCD2Q9BXW9 1451 aa30.32■■■□□ 2.44
CDHR3-207ENST00000470188 IGF1RP08069 1367 aa30.3■■■□□ 2.44
CDHR3-207ENST00000470188 HNRNPUL2Q1KMD3 747 aaKnown RBP30.26■■■□□ 2.43
CDHR3-207ENST00000470188 NESP48681 1621 aa30.22■■■□□ 2.43
CDHR3-207ENST00000470188 ARHGAP35Q9NRY4 1499 aa30.2■■■□□ 2.42
CDHR3-207ENST00000470188 CARMIL1Q5VZK9 1371 aa30.17■■■□□ 2.42
CDHR3-207ENST00000470188 DNMBPQ6XZF7 1577 aa30.16■■■□□ 2.42
CDHR3-207ENST00000470188 ACIN1Q9UKV3 1341 aaKnown RBP30.16■■■□□ 2.42
CDHR3-207ENST00000470188 LAMC3Q9Y6N6 1575 aa30.12■■■□□ 2.41
CDHR3-207ENST00000470188 KANK4Q5T7N3 995 aaPredicted RBP30.09■■■□□ 2.41
CDHR3-207ENST00000470188 TOPBP1Q92547 1522 aa30.09■■■□□ 2.41
CDHR3-207ENST00000470188 ABCA10Q8WWZ4 1543 aa30.04■■■□□ 2.4
CDHR3-207ENST00000470188 POLA1P09884 1462 aaPredicted RBP30.04■■■□□ 2.4
CDHR3-207ENST00000470188 RAD54L2Q9Y4B4 1467 aa30.03■■■□□ 2.4
CDHR3-207ENST00000470188 NEUROD1Q13562 356 aa29.97■■■□□ 2.39
CDHR3-207ENST00000470188 CENPBP07199 599 aaPredicted RBP29.95■■■□□ 2.38
CDHR3-207ENST00000470188 RRBP1Q9P2E9 1410 aaKnown RBP29.94■■■□□ 2.38
CDHR3-207ENST00000470188 DIEXFQ68CQ4 756 aaKnown RBP29.91■■■□□ 2.38
CDHR3-207ENST00000470188 PDS5BQ9NTI5 1447 aa29.91■■■□□ 2.38
CDHR3-207ENST00000470188 URB2Q14146 1524 aaKnown RBP29.88■■■□□ 2.37
CDHR3-207ENST00000470188 MAP3K1Q13233 1512 aa29.86■■■□□ 2.37
CDHR3-207ENST00000470188 CUL7Q14999 1698 aa29.85■■■□□ 2.37
CDHR3-207ENST00000470188 TIAM1Q13009 1591 aa29.84■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms