RNA–Protein interactions for RNA: ENST00000473388.6

ATXN1-204, Transcript of ataxin 1, humanhuman

TSL 1 (best)

Gene ATXN1, Length 1,569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN1-204ENST00000473388 NISCHQ9Y2I1 1504 aa18.82■□□□□ 0.6
ATXN1-204ENST00000473388 ABCC9O60706 1549 aa17.23■□□□□ 0.35
ATXN1-204ENST00000473388 CCDC180Q9P1Z9 1646 aa16.96■□□□□ 0.31
ATXN1-204ENST00000473388 DNAJC5BQ9UF47 199 aa16.34■□□□□ 0.21
ATXN1-204ENST00000473388 RB1CC1Q8TDY2 1594 aa16.26■□□□□ 0.19
ATXN1-204ENST00000473388 NACADO15069 1562 aa16.08■□□□□ 0.16
ATXN1-204ENST00000473388 DCAF8L2P0C7V8 631 aa16.06■□□□□ 0.16
ATXN1-204ENST00000473388 PABPN1Q86U42 306 aaKnown RBP eCLIP16.03■□□□□ 0.16
ATXN1-204ENST00000473388 UNC13AQ9UPW8 1703 aa15.92■□□□□ 0.14
ATXN1-204ENST00000473388 BICRAQ9NZM4 1560 aa15.81■□□□□ 0.12
ATXN1-204ENST00000473388 MYO15BQ96JP2 1530 aa15.74■□□□□ 0.11
ATXN1-204ENST00000473388 ZCCHC6Q5VYS8 1495 aaKnown RBP15.55■□□□□ 0.08
ATXN1-204ENST00000473388 CC2D2AQ9P2K1 1620 aa15.53■□□□□ 0.08
ATXN1-204ENST00000473388 SCRIBQ14160 1630 aa15.52■□□□□ 0.07
ATXN1-204ENST00000473388 CECR2Q9BXF3 1484 aa15.51■□□□□ 0.07
ATXN1-204ENST00000473388 SHROOM4Q9ULL8 1493 aa15.49■□□□□ 0.07
ATXN1-204ENST00000473388 DCAF1Q9Y4B6 1507 aa15.48■□□□□ 0.07
ATXN1-204ENST00000473388 EIF4G1Q04637 1599 aaKnown RBP15.43■□□□□ 0.06
ATXN1-204ENST00000473388 DNAJC5Q9H3Z4 198 aa15.11■□□□□ 0.01
ATXN1-204ENST00000473388 ERCC6Q03468 1493 aa14.88□□□□□ -0.03
ATXN1-204ENST00000473388 CUX2O14529 1486 aa14.87□□□□□ -0.03
ATXN1-204ENST00000473388 NCAPD3P42695 1498 aa14.84□□□□□ -0.03
ATXN1-204ENST00000473388 ATAD2BQ9ULI0 1458 aa14.79□□□□□ -0.04
ATXN1-204ENST00000473388 NESP48681 1621 aa14.75□□□□□ -0.05
ATXN1-204ENST00000473388 SMARCA4P51532 1647 aa14.74□□□□□ -0.05
ATXN1-204ENST00000473388 SMARCA2P51531 1590 aa14.73□□□□□ -0.05
ATXN1-204ENST00000473388 HMGXB3Q12766 1538 aa14.72□□□□□ -0.05
ATXN1-204ENST00000473388 BAZ1BQ9UIG0 1483 aaKnown RBP14.65□□□□□ -0.06
ATXN1-204ENST00000473388 BAZ1AQ9NRL2 1556 aaPredicted RBP14.62□□□□□ -0.07
ATXN1-204ENST00000473388 THOC2Q8NI27 1593 aaKnown RBP14.61□□□□□ -0.07
ATXN1-204ENST00000473388 LAMC3Q9Y6N6 1575 aa14.55□□□□□ -0.08
ATXN1-204ENST00000473388 PEG3Q9GZU2 1588 aa14.55□□□□□ -0.08
ATXN1-204ENST00000473388 KIF21AQ7Z4S6 1674 aa14.54□□□□□ -0.08
ATXN1-204ENST00000473388 MROH2BQ7Z745 1585 aa14.54□□□□□ -0.08
ATXN1-204ENST00000473388 PDS5BQ9NTI5 1447 aa14.47□□□□□ -0.09
ATXN1-204ENST00000473388 TRIM41Q8WV44 630 aa14.44□□□□□ -0.1
ATXN1-204ENST00000473388 CADPSQ9ULU8 1353 aa14.4□□□□□ -0.1
ATXN1-204ENST00000473388 MRC2Q9UBG0 1479 aa14.38□□□□□ -0.11
ATXN1-204ENST00000473388 WIZO95785 1651 aa14.36□□□□□ -0.11
ATXN1-204ENST00000473388 WDR62O43379 1518 aa14.34□□□□□ -0.11
ATXN1-204ENST00000473388 CEP164Q9UPV0 1460 aa14.29□□□□□ -0.12
ATXN1-204ENST00000473388 FANCD2Q9BXW9 1451 aa14.26□□□□□ -0.13
ATXN1-204ENST00000473388 CFTRP13569 1480 aa14.18□□□□□ -0.14
ATXN1-204ENST00000473388 OSCARQ8IYS5 282 aa14.17□□□□□ -0.14
ATXN1-204ENST00000473388 URB2Q14146 1524 aaKnown RBP14.16□□□□□ -0.14
ATXN1-204ENST00000473388 RSF1Q96T23 1441 aaPredicted RBP14.14□□□□□ -0.15
ATXN1-204ENST00000473388 TOP2AP11388 1531 aaKnown RBP14.13□□□□□ -0.15
ATXN1-204ENST00000473388 RIMBP3CA6NJZ7 1639 aa14.05□□□□□ -0.16
ATXN1-204ENST00000473388 RIMBP3BA6NNM3 1639 aa14.05□□□□□ -0.16
ATXN1-204ENST00000473388 RIMBP3Q9UFD9 1639 aa14.05□□□□□ -0.16
ATXN1-204ENST00000473388 PRDM2Q13029 1718 aa14.04□□□□□ -0.16
ATXN1-204ENST00000473388 ZNF608Q9ULD9 1512 aaPredicted RBP14.04□□□□□ -0.16
ATXN1-204ENST00000473388 IFT140Q96RY7 1462 aa14□□□□□ -0.17
ATXN1-204ENST00000473388 CCDC88BA6NC98 1476 aa13.98□□□□□ -0.17
ATXN1-204ENST00000473388 ARHGEF11O15085 1522 aa13.97□□□□□ -0.17
ATXN1-204ENST00000473388 TOPBP1Q92547 1522 aa13.96□□□□□ -0.17
ATXN1-204ENST00000473388 EIF4G3O43432 1585 aaKnown RBP13.94□□□□□ -0.18
ATXN1-204ENST00000473388 AEBP2Q6ZN18 517 aaPredicted RBP13.91□□□□□ -0.18
ATXN1-204ENST00000473388 CYB5RLQ6IPT4 315 aa13.9□□□□□ -0.18
ATXN1-204ENST00000473388 CHD1O14646 1710 aa13.89□□□□□ -0.19
ATXN1-204ENST00000473388 DNMBPQ6XZF7 1577 aa13.89□□□□□ -0.19
ATXN1-204ENST00000473388 AQRO60306 1485 aaKnown RBP eCLIP13.88□□□□□ -0.19
ATXN1-204ENST00000473388 ABCC8Q09428 1581 aa13.87□□□□□ -0.19
ATXN1-204ENST00000473388 FBLN2P98095 1184 aa13.86□□□□□ -0.19
ATXN1-204ENST00000473388 TARBP1Q13395 1621 aaKnown RBP13.85□□□□□ -0.19
ATXN1-204ENST00000473388 TRHP20396 242 aaPredicted RBP13.83□□□□□ -0.19
ATXN1-204ENST00000473388 ARAP1Q96P48 1450 aa13.82□□□□□ -0.2
ATXN1-204ENST00000473388 POLA1P09884 1462 aaPredicted RBP13.81□□□□□ -0.2
ATXN1-204ENST00000473388 RAD54L2Q9Y4B4 1467 aa13.79□□□□□ -0.2
ATXN1-204ENST00000473388 TDRD9Q8NDG6 1382 aaKnown RBP13.77□□□□□ -0.21
ATXN1-204ENST00000473388 SOGA1O94964 1423 aa13.74□□□□□ -0.21
ATXN1-204ENST00000473388 SNAPC4Q5SXM2 1469 aa13.73□□□□□ -0.21
ATXN1-204ENST00000473388 FGD5Q6ZNL6 1462 aa13.71□□□□□ -0.21
ATXN1-204ENST00000473388 CLASP1Q7Z460 1538 aa13.69□□□□□ -0.22
ATXN1-204ENST00000473388 CHMP7Q8WUX9 453 aaPredicted RBP13.68□□□□□ -0.22
ATXN1-204ENST00000473388 SYNJ1O43426 1573 aa13.66□□□□□ -0.22
ATXN1-204ENST00000473388 CUX1P39880 1505 aa13.66□□□□□ -0.22
ATXN1-204ENST00000473388 WDR97A6NE52 1622 aa13.64□□□□□ -0.23
ATXN1-204ENST00000473388 MAGI1Q96QZ7 1491 aaPredicted RBP13.64□□□□□ -0.23
ATXN1-204ENST00000473388 GRIN2BQ13224 1484 aa13.63□□□□□ -0.23
ATXN1-204ENST00000473388 SYNJ2O15056 1496 aa13.61□□□□□ -0.23
ATXN1-204ENST00000473388 PBRM1Q86U86 1689 aa13.6□□□□□ -0.23
ATXN1-204ENST00000473388 GAPVD1Q14C86 1478 aa13.57□□□□□ -0.24
ATXN1-204ENST00000473388 ABCA5Q8WWZ7 1642 aa13.52□□□□□ -0.25
ATXN1-204ENST00000473388 ERCC6L2Q5T890 1561 aa13.51□□□□□ -0.25
ATXN1-204ENST00000473388 ABCA10Q8WWZ4 1543 aa13.5□□□□□ -0.25
ATXN1-204ENST00000473388 GRIN2AQ12879 1464 aa13.46□□□□□ -0.25
ATXN1-204ENST00000473388 CEP170Q5SW79 1584 aa13.45□□□□□ -0.26
ATXN1-204ENST00000473388 ADAMTS12P58397 1594 aa13.44□□□□□ -0.26
ATXN1-204ENST00000473388 SUPT5HO00267 1087 aaKnown RBP13.43□□□□□ -0.26
ATXN1-204ENST00000473388 NUP160Q12769 1436 aa13.41□□□□□ -0.26
ATXN1-204ENST00000473388 WRNQ14191 1432 aaPredicted RBP eCLIP13.41□□□□□ -0.26
ATXN1-204ENST00000473388 SHROOM2Q13796 1616 aa13.38□□□□□ -0.27
ATXN1-204ENST00000473388 FHAD1B1AJZ9 1412 aa13.37□□□□□ -0.27
ATXN1-204ENST00000473388 BIVM-ERCC5R4GMW8 1640 aa13.37□□□□□ -0.27
ATXN1-204ENST00000473388 TOP2BQ02880 1626 aa13.36□□□□□ -0.27
ATXN1-204ENST00000473388 KIF13AQ9H1H9 1805 aa13.34□□□□□ -0.27
ATXN1-204ENST00000473388 PRG4Q92954 1404 aaPredicted RBP13.33□□□□□ -0.27
ATXN1-204ENST00000473388 ERICH3Q5RHP9 1530 aa13.33□□□□□ -0.28
ATXN1-204ENST00000473388 JPH4Q96JJ6 628 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms