RNA–Protein interactions for RNA: ENST00000449891.5

UBE2F-SCLY-202, Transcript of UBE2F-SCLY readthrough (NMD candidate), humanhuman

APPRIS ALT2 TSL 2

Gene UBE2F-SCLY, Length 2,902 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-SCLY-202ENST00000449891 NISCHQ9Y2I1 1504 aa26.49■■□□□ 1.83
UBE2F-SCLY-202ENST00000449891 CCDC180Q9P1Z9 1646 aa23.47■■□□□ 1.35
UBE2F-SCLY-202ENST00000449891 SHROOM4Q9ULL8 1493 aa23.36■■□□□ 1.33
UBE2F-SCLY-202ENST00000449891 ABCC9O60706 1549 aa23.05■■□□□ 1.28
UBE2F-SCLY-202ENST00000449891 SUPT5HO00267 1087 aaKnown RBP23.03■■□□□ 1.28
UBE2F-SCLY-202ENST00000449891 DCAF8L2P0C7V8 631 aa22.64■■□□□ 1.22
UBE2F-SCLY-202ENST00000449891 CHIC1Q5VXU3 224 aa22.16■■□□□ 1.14
UBE2F-SCLY-202ENST00000449891 MYO15BQ96JP2 1530 aa22.15■■□□□ 1.14
UBE2F-SCLY-202ENST00000449891 RB1CC1Q8TDY2 1594 aa22.14■■□□□ 1.13
UBE2F-SCLY-202ENST00000449891 ZCCHC6Q5VYS8 1495 aaKnown RBP22.12■■□□□ 1.13
UBE2F-SCLY-202ENST00000449891 NACADO15069 1562 aa22.11■■□□□ 1.13
UBE2F-SCLY-202ENST00000449891 PCGF6Q9BYE7 350 aa22.06■■□□□ 1.12
UBE2F-SCLY-202ENST00000449891 HRCP23327 699 aa21.89■■□□□ 1.09
UBE2F-SCLY-202ENST00000449891 DCAF1Q9Y4B6 1507 aa21.88■■□□□ 1.09
UBE2F-SCLY-202ENST00000449891 LOC105371045A0A1W2PR82 267 aa21.86■■□□□ 1.09
UBE2F-SCLY-202ENST00000449891 PPARGC1BQ86YN6 1023 aaKnown RBP21.86■■□□□ 1.09
UBE2F-SCLY-202ENST00000449891 PABPN1Q86U42 306 aaKnown RBP eCLIP21.6■■□□□ 1.05
UBE2F-SCLY-202ENST00000449891 UNC13AQ9UPW8 1703 aa21.55■■□□□ 1.04
UBE2F-SCLY-202ENST00000449891 EHMT2Q96KQ7 1210 aa21.55■■□□□ 1.04
UBE2F-SCLY-202ENST00000449891 SCRIBQ14160 1630 aa21.49■■□□□ 1.03
UBE2F-SCLY-202ENST00000449891 BICRAQ9NZM4 1560 aa21.43■■□□□ 1.02
UBE2F-SCLY-202ENST00000449891 FAM9AQ8IZU1 332 aaPredicted RBP21.41■■□□□ 1.02
UBE2F-SCLY-202ENST00000449891 TRIM26Q12899 539 aaPredicted RBP21.2■□□□□ 0.98
UBE2F-SCLY-202ENST00000449891 TRIM41Q8WV44 630 aa21.18■□□□□ 0.98
UBE2F-SCLY-202ENST00000449891 DNAJC5BQ9UF47 199 aa21.13■□□□□ 0.97
UBE2F-SCLY-202ENST00000449891 PELP1Q8IZL8 1130 aaKnown RBP21.01■□□□□ 0.95
UBE2F-SCLY-202ENST00000449891 RSF1Q96T23 1441 aaPredicted RBP20.99■□□□□ 0.95
UBE2F-SCLY-202ENST00000449891 EIF4G1Q04637 1599 aaKnown RBP20.9■□□□□ 0.94
UBE2F-SCLY-202ENST00000449891 TTBK1Q5TCY1 1321 aaPredicted RBP20.84■□□□□ 0.93
UBE2F-SCLY-202ENST00000449891 CC2D2AQ9P2K1 1620 aa20.8■□□□□ 0.92
UBE2F-SCLY-202ENST00000449891 CECR2Q9BXF3 1484 aa20.73■□□□□ 0.91
UBE2F-SCLY-202ENST00000449891 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.67■□□□□ 0.9
UBE2F-SCLY-202ENST00000449891 ZEB1P37275 1124 aaPredicted RBP20.64■□□□□ 0.9
UBE2F-SCLY-202ENST00000449891 MROH2BQ7Z745 1585 aa20.56■□□□□ 0.88
UBE2F-SCLY-202ENST00000449891 BAZ1AQ9NRL2 1556 aaPredicted RBP20.54■□□□□ 0.88
UBE2F-SCLY-202ENST00000449891 SMARCA4P51532 1647 aa20.53■□□□□ 0.88
UBE2F-SCLY-202ENST00000449891 SCAF1Q9H7N4 1312 aaKnown RBP20.52■□□□□ 0.88
UBE2F-SCLY-202ENST00000449891 CCER1Q8TC90 406 aaPredicted RBP20.52■□□□□ 0.88
UBE2F-SCLY-202ENST00000449891 MYT1Q01538 1121 aa20.5■□□□□ 0.87
UBE2F-SCLY-202ENST00000449891 WIZO95785 1651 aa20.47■□□□□ 0.87
UBE2F-SCLY-202ENST00000449891 ATAD2BQ9ULI0 1458 aa20.44■□□□□ 0.86
UBE2F-SCLY-202ENST00000449891 NCAPD3P42695 1498 aa20.42■□□□□ 0.86
UBE2F-SCLY-202ENST00000449891 SMARCA2P51531 1590 aa20.42■□□□□ 0.86
UBE2F-SCLY-202ENST00000449891 BAZ1BQ9UIG0 1483 aaKnown RBP20.3■□□□□ 0.84
UBE2F-SCLY-202ENST00000449891 PEG3Q9GZU2 1588 aa20.3■□□□□ 0.84
UBE2F-SCLY-202ENST00000449891 HMGXB3Q12766 1538 aa20.29■□□□□ 0.84
UBE2F-SCLY-202ENST00000449891 ABCC8Q09428 1581 aa20.27■□□□□ 0.83
UBE2F-SCLY-202ENST00000449891 UBTFP17480 764 aaKnown RBP20.25■□□□□ 0.83
UBE2F-SCLY-202ENST00000449891 NEUROD1Q13562 356 aa20.22■□□□□ 0.83
UBE2F-SCLY-202ENST00000449891 RANGAP1P46060 587 aaPredicted RBP20.21■□□□□ 0.83
UBE2F-SCLY-202ENST00000449891 CCDC88BA6NC98 1476 aa20.21■□□□□ 0.83
UBE2F-SCLY-202ENST00000449891 DIEXFQ68CQ4 756 aaKnown RBP20.18■□□□□ 0.82
UBE2F-SCLY-202ENST00000449891 SOGA1O94964 1423 aa20.16■□□□□ 0.82
UBE2F-SCLY-202ENST00000449891 ACIN1Q9UKV3 1341 aaKnown RBP20.1■□□□□ 0.81
UBE2F-SCLY-202ENST00000449891 RUSC2Q8N2Y8 1516 aa20.1■□□□□ 0.81
UBE2F-SCLY-202ENST00000449891 YTHDC1Q96MU7 727 aaKnown RBP20.09■□□□□ 0.81
UBE2F-SCLY-202ENST00000449891 HNRNPUL2Q1KMD3 747 aaKnown RBP20.08■□□□□ 0.8
UBE2F-SCLY-202ENST00000449891 GTF3C3Q9Y5Q9 886 aa20.06■□□□□ 0.8
UBE2F-SCLY-202ENST00000449891 CEP162Q5TB80 1403 aa20.06■□□□□ 0.8
UBE2F-SCLY-202ENST00000449891 CSRNP3Q8WYN3 585 aa20.03■□□□□ 0.8
UBE2F-SCLY-202ENST00000449891 TOP2AP11388 1531 aaKnown RBP19.97■□□□□ 0.79
UBE2F-SCLY-202ENST00000449891 NESP48681 1621 aa19.94■□□□□ 0.78
UBE2F-SCLY-202ENST00000449891 ERCC6Q03468 1493 aa19.9■□□□□ 0.78
UBE2F-SCLY-202ENST00000449891 CENPBP07199 599 aaPredicted RBP19.89■□□□□ 0.77
UBE2F-SCLY-202ENST00000449891 CADPSQ9ULU8 1353 aa19.87■□□□□ 0.77
UBE2F-SCLY-202ENST00000449891 LAMC3Q9Y6N6 1575 aa19.86■□□□□ 0.77
UBE2F-SCLY-202ENST00000449891 TNIKQ9UKE5 1360 aa19.86■□□□□ 0.77
UBE2F-SCLY-202ENST00000449891 ZNF316A6NFI3 1004 aaPredicted RBP19.84■□□□□ 0.77
UBE2F-SCLY-202ENST00000449891 WRNQ14191 1432 aaPredicted RBP eCLIP19.8■□□□□ 0.76
UBE2F-SCLY-202ENST00000449891 PDS5BQ9NTI5 1447 aa19.79■□□□□ 0.76
UBE2F-SCLY-202ENST00000449891 MIER1Q8N108 512 aa19.79■□□□□ 0.76
UBE2F-SCLY-202ENST00000449891 APLP2Q06481 763 aa19.74■□□□□ 0.75
UBE2F-SCLY-202ENST00000449891 CFTRP13569 1480 aa19.72■□□□□ 0.75
UBE2F-SCLY-202ENST00000449891 GOLGA3Q08378 1498 aa19.7■□□□□ 0.74
UBE2F-SCLY-202ENST00000449891 KIF21AQ7Z4S6 1674 aa19.65■□□□□ 0.74
UBE2F-SCLY-202ENST00000449891 CLIP1P30622 1438 aa19.65■□□□□ 0.74
UBE2F-SCLY-202ENST00000449891 FANCD2Q9BXW9 1451 aa19.63■□□□□ 0.73
UBE2F-SCLY-202ENST00000449891 CUX2O14529 1486 aa19.61■□□□□ 0.73
UBE2F-SCLY-202ENST00000449891 CEP164Q9UPV0 1460 aa19.6■□□□□ 0.73
UBE2F-SCLY-202ENST00000449891 EEA1Q15075 1411 aa19.59■□□□□ 0.73
UBE2F-SCLY-202ENST00000449891 SYNJ1O43426 1573 aa19.58■□□□□ 0.73
UBE2F-SCLY-202ENST00000449891 ITGAEP38570 1179 aa19.58■□□□□ 0.73
UBE2F-SCLY-202ENST00000449891 RAPGEF2Q9Y4G8 1499 aa19.57■□□□□ 0.72
UBE2F-SCLY-202ENST00000449891 THOC2Q8NI27 1593 aaKnown RBP19.56■□□□□ 0.72
UBE2F-SCLY-202ENST00000449891 MRC2Q9UBG0 1479 aa19.55■□□□□ 0.72
UBE2F-SCLY-202ENST00000449891 PRKCSHP14314 528 aaPredicted RBP19.52■□□□□ 0.71
UBE2F-SCLY-202ENST00000449891 KANK4Q5T7N3 995 aaPredicted RBP19.49■□□□□ 0.71
UBE2F-SCLY-202ENST00000449891 PRDM2Q13029 1718 aa19.48■□□□□ 0.71
UBE2F-SCLY-202ENST00000449891 VPS8Q8N3P4 1428 aa19.46■□□□□ 0.71
UBE2F-SCLY-202ENST00000449891 WDR62O43379 1518 aa19.45■□□□□ 0.7
UBE2F-SCLY-202ENST00000449891 URB2Q14146 1524 aaKnown RBP19.4■□□□□ 0.7
UBE2F-SCLY-202ENST00000449891 KIF21BO75037 1637 aa19.35■□□□□ 0.69
UBE2F-SCLY-202ENST00000449891 TOPBP1Q92547 1522 aa19.29■□□□□ 0.68
UBE2F-SCLY-202ENST00000449891 DHX57Q6P158 1386 aaKnown RBP19.28■□□□□ 0.68
UBE2F-SCLY-202ENST00000449891 BCL11AQ9H165 835 aa19.28■□□□□ 0.68
UBE2F-SCLY-202ENST00000449891 ATP1B4Q9UN42 357 aaPredicted RBP19.28■□□□□ 0.68
UBE2F-SCLY-202ENST00000449891 KCNH8Q96L42 1107 aa19.27■□□□□ 0.68
UBE2F-SCLY-202ENST00000449891 DNMBPQ6XZF7 1577 aa19.26■□□□□ 0.67
UBE2F-SCLY-202ENST00000449891 P3H3Q8IVL6 736 aa19.23■□□□□ 0.67
UBE2F-SCLY-202ENST00000449891 ARAP1Q96P48 1450 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms