RNA–Protein interactions for RNA: ENST00000455999.5

UBE2F-219, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 5

Gene UBE2F, Length 760 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-219ENST00000455999 NISCHQ9Y2I1 1504 aa37.73■■■■□ 3.63
UBE2F-219ENST00000455999 ABCC9O60706 1549 aa34.26■■■■□ 3.08
UBE2F-219ENST00000455999 CCDC180Q9P1Z9 1646 aa34.04■■■■□ 3.04
UBE2F-219ENST00000455999 RB1CC1Q8TDY2 1594 aa32.47■■■□□ 2.79
UBE2F-219ENST00000455999 DNAJC5BQ9UF47 199 aa32.37■■■□□ 2.77
UBE2F-219ENST00000455999 NACADO15069 1562 aa32.16■■■□□ 2.74
UBE2F-219ENST00000455999 UNC13AQ9UPW8 1703 aa31.99■■■□□ 2.71
UBE2F-219ENST00000455999 DCAF8L2P0C7V8 631 aa31.94■■■□□ 2.7
UBE2F-219ENST00000455999 PABPN1Q86U42 306 aaKnown RBP eCLIP31.83■■■□□ 2.69
UBE2F-219ENST00000455999 BICRAQ9NZM4 1560 aa31.6■■■□□ 2.65
UBE2F-219ENST00000455999 MYO15BQ96JP2 1530 aa31.57■■■□□ 2.64
UBE2F-219ENST00000455999 ZCCHC6Q5VYS8 1495 aaKnown RBP31.21■■■□□ 2.59
UBE2F-219ENST00000455999 DCAF1Q9Y4B6 1507 aa31.1■■■□□ 2.57
UBE2F-219ENST00000455999 SCRIBQ14160 1630 aa31.02■■■□□ 2.56
UBE2F-219ENST00000455999 CC2D2AQ9P2K1 1620 aa30.98■■■□□ 2.55
UBE2F-219ENST00000455999 SHROOM4Q9ULL8 1493 aa30.97■■■□□ 2.55
UBE2F-219ENST00000455999 CECR2Q9BXF3 1484 aa30.85■■■□□ 2.53
UBE2F-219ENST00000455999 EIF4G1Q04637 1599 aaKnown RBP30.81■■■□□ 2.52
UBE2F-219ENST00000455999 DNAJC5Q9H3Z4 198 aa29.82■■■□□ 2.36
UBE2F-219ENST00000455999 NCAPD3P42695 1498 aa29.66■■■□□ 2.34
UBE2F-219ENST00000455999 ATAD2BQ9ULI0 1458 aa29.57■■■□□ 2.32
UBE2F-219ENST00000455999 CUX2O14529 1486 aa29.55■■■□□ 2.32
UBE2F-219ENST00000455999 SMARCA4P51532 1647 aa29.55■■■□□ 2.32
UBE2F-219ENST00000455999 ERCC6Q03468 1493 aa29.55■■■□□ 2.32
UBE2F-219ENST00000455999 SMARCA2P51531 1590 aa29.47■■■□□ 2.31
UBE2F-219ENST00000455999 HMGXB3Q12766 1538 aa29.45■■■□□ 2.31
UBE2F-219ENST00000455999 NESP48681 1621 aa29.39■■■□□ 2.3
UBE2F-219ENST00000455999 BAZ1AQ9NRL2 1556 aaPredicted RBP29.29■■■□□ 2.28
UBE2F-219ENST00000455999 BAZ1BQ9UIG0 1483 aaKnown RBP29.26■■■□□ 2.27
UBE2F-219ENST00000455999 PEG3Q9GZU2 1588 aa29.21■■■□□ 2.27
UBE2F-219ENST00000455999 THOC2Q8NI27 1593 aaKnown RBP29.16■■■□□ 2.26
UBE2F-219ENST00000455999 MROH2BQ7Z745 1585 aa29.11■■■□□ 2.25
UBE2F-219ENST00000455999 KIF21AQ7Z4S6 1674 aa29.11■■■□□ 2.25
UBE2F-219ENST00000455999 LAMC3Q9Y6N6 1575 aa29.09■■■□□ 2.25
UBE2F-219ENST00000455999 PDS5BQ9NTI5 1447 aa28.85■■■□□ 2.21
UBE2F-219ENST00000455999 WIZO95785 1651 aa28.83■■■□□ 2.21
UBE2F-219ENST00000455999 CADPSQ9ULU8 1353 aa28.74■■■□□ 2.19
UBE2F-219ENST00000455999 MRC2Q9UBG0 1479 aa28.67■■■□□ 2.18
UBE2F-219ENST00000455999 WDR62O43379 1518 aa28.64■■■□□ 2.17
UBE2F-219ENST00000455999 CEP164Q9UPV0 1460 aa28.51■■■□□ 2.15
UBE2F-219ENST00000455999 TRIM41Q8WV44 630 aa28.46■■■□□ 2.15
UBE2F-219ENST00000455999 FANCD2Q9BXW9 1451 aa28.46■■■□□ 2.15
UBE2F-219ENST00000455999 CFTRP13569 1480 aa28.38■■■□□ 2.13
UBE2F-219ENST00000455999 RSF1Q96T23 1441 aaPredicted RBP28.35■■■□□ 2.13
UBE2F-219ENST00000455999 TOP2AP11388 1531 aaKnown RBP28.34■■■□□ 2.13
UBE2F-219ENST00000455999 PRDM2Q13029 1718 aa28.3■■■□□ 2.12
UBE2F-219ENST00000455999 URB2Q14146 1524 aaKnown RBP28.28■■■□□ 2.12
UBE2F-219ENST00000455999 OSCARQ8IYS5 282 aa28.13■■■□□ 2.09
UBE2F-219ENST00000455999 CCDC88BA6NC98 1476 aa28.02■■■□□ 2.08
UBE2F-219ENST00000455999 ZNF608Q9ULD9 1512 aaPredicted RBP27.98■■■□□ 2.07
UBE2F-219ENST00000455999 RIMBP3CA6NJZ7 1639 aa27.96■■■□□ 2.07
UBE2F-219ENST00000455999 RIMBP3BA6NNM3 1639 aa27.96■■■□□ 2.07
UBE2F-219ENST00000455999 RIMBP3Q9UFD9 1639 aa27.96■■■□□ 2.07
UBE2F-219ENST00000455999 IFT140Q96RY7 1462 aa27.92■■■□□ 2.06
UBE2F-219ENST00000455999 TOPBP1Q92547 1522 aa27.92■■■□□ 2.06
UBE2F-219ENST00000455999 EIF4G3O43432 1585 aaKnown RBP27.85■■■□□ 2.05
UBE2F-219ENST00000455999 DNMBPQ6XZF7 1577 aa27.8■■■□□ 2.04
UBE2F-219ENST00000455999 CHD1O14646 1710 aa27.79■■■□□ 2.04
UBE2F-219ENST00000455999 ARHGEF11O15085 1522 aa27.77■■■□□ 2.04
UBE2F-219ENST00000455999 ABCC8Q09428 1581 aa27.75■■■□□ 2.03
UBE2F-219ENST00000455999 TARBP1Q13395 1621 aaKnown RBP27.74■■■□□ 2.03
UBE2F-219ENST00000455999 AQRO60306 1485 aaKnown RBP eCLIP27.67■■■□□ 2.023e-6■■■□□ 18.3
UBE2F-219ENST00000455999 POLA1P09884 1462 aaPredicted RBP27.61■■■□□ 2.01
UBE2F-219ENST00000455999 CYB5RLQ6IPT4 315 aa27.55■■■□□ 2
UBE2F-219ENST00000455999 RAD54L2Q9Y4B4 1467 aa27.54■■■□□ 2
UBE2F-219ENST00000455999 FBLN2P98095 1184 aa27.51■■□□□ 1.99
UBE2F-219ENST00000455999 ARAP1Q96P48 1450 aa27.49■■□□□ 1.99
UBE2F-219ENST00000455999 SOGA1O94964 1423 aa27.44■■□□□ 1.98
UBE2F-219ENST00000455999 TDRD9Q8NDG6 1382 aaKnown RBP27.44■■□□□ 1.98
UBE2F-219ENST00000455999 FGD5Q6ZNL6 1462 aa27.41■■□□□ 1.98
UBE2F-219ENST00000455999 SNAPC4Q5SXM2 1469 aa27.38■■□□□ 1.97
UBE2F-219ENST00000455999 CUX1P39880 1505 aa27.36■■□□□ 1.97
UBE2F-219ENST00000455999 WDR97A6NE52 1622 aa27.34■■□□□ 1.97
UBE2F-219ENST00000455999 CLASP1Q7Z460 1538 aa27.33■■□□□ 1.97
UBE2F-219ENST00000455999 TRHP20396 242 aaPredicted RBP27.31■■□□□ 1.96
UBE2F-219ENST00000455999 PBRM1Q86U86 1689 aa27.28■■□□□ 1.96
UBE2F-219ENST00000455999 SYNJ1O43426 1573 aa27.26■■□□□ 1.96
UBE2F-219ENST00000455999 MAGI1Q96QZ7 1491 aaPredicted RBP27.25■■□□□ 1.95
UBE2F-219ENST00000455999 GRIN2BQ13224 1484 aa27.22■■□□□ 1.95
UBE2F-219ENST00000455999 CHMP7Q8WUX9 453 aaPredicted RBP27.22■■□□□ 1.95
UBE2F-219ENST00000455999 SYNJ2O15056 1496 aa27.18■■□□□ 1.94
UBE2F-219ENST00000455999 GAPVD1Q14C86 1478 aa27.12■■□□□ 1.93
UBE2F-219ENST00000455999 ABCA5Q8WWZ7 1642 aa27.12■■□□□ 1.93
UBE2F-219ENST00000455999 ABCA10Q8WWZ4 1543 aa27.05■■□□□ 1.92
UBE2F-219ENST00000455999 ERCC6L2Q5T890 1561 aa26.96■■□□□ 1.91
UBE2F-219ENST00000455999 SUPT5HO00267 1087 aaKnown RBP26.93■■□□□ 1.9
UBE2F-219ENST00000455999 GRIN2AQ12879 1464 aa26.91■■□□□ 1.9
UBE2F-219ENST00000455999 ADAMTS12P58397 1594 aa26.91■■□□□ 1.9
UBE2F-219ENST00000455999 BIVM-ERCC5R4GMW8 1640 aa26.9■■□□□ 1.9
UBE2F-219ENST00000455999 CEP170Q5SW79 1584 aa26.89■■□□□ 1.9
UBE2F-219ENST00000455999 TOP2BQ02880 1626 aa26.85■■□□□ 1.89
UBE2F-219ENST00000455999 WRNQ14191 1432 aaPredicted RBP eCLIP26.84■■□□□ 1.89
UBE2F-219ENST00000455999 NUP160Q12769 1436 aa26.81■■□□□ 1.88
UBE2F-219ENST00000455999 SHROOM2Q13796 1616 aa26.8■■□□□ 1.88
UBE2F-219ENST00000455999 FHAD1B1AJZ9 1412 aa26.73■■□□□ 1.87
UBE2F-219ENST00000455999 ERICH3Q5RHP9 1530 aa26.7■■□□□ 1.87
UBE2F-219ENST00000455999 KIF13AQ9H1H9 1805 aa26.7■■□□□ 1.87
UBE2F-219ENST00000455999 AEBP2Q6ZN18 517 aaPredicted RBP26.67■■□□□ 1.86
UBE2F-219ENST00000455999 PRG4Q92954 1404 aaPredicted RBP26.57■■□□□ 1.84
UBE2F-219ENST00000455999 RUSC2Q8N2Y8 1516 aa26.55■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 182 ms