RNA–Protein interactions for RNA: ENST00000456378.1

UBP1-205, Transcript of upstream binding protein 1, humanhuman

TSL 4

Gene UBP1, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1-205ENST00000456378 NISCHQ9Y2I1 1504 aa58.31■■■■■ 6.92
UBP1-205ENST00000456378 CCDC180Q9P1Z9 1646 aa51.89■■■■■ 5.9
UBP1-205ENST00000456378 ABCC9O60706 1549 aa51.21■■■■■ 5.79
UBP1-205ENST00000456378 RB1CC1Q8TDY2 1594 aa49.02■■■■■ 5.44
UBP1-205ENST00000456378 NACADO15069 1562 aa48.9■■■■■ 5.42
UBP1-205ENST00000456378 DCAF8L2P0C7V8 631 aa48.89■■■■■ 5.42
UBP1-205ENST00000456378 MYO15BQ96JP2 1530 aa48.5■■■■■ 5.35
UBP1-205ENST00000456378 ZCCHC6Q5VYS8 1495 aaKnown RBP48.48■■■■■ 5.35
UBP1-205ENST00000456378 DCAF1Q9Y4B6 1507 aa48.18■■■■■ 5.3
UBP1-205ENST00000456378 UNC13AQ9UPW8 1703 aa47.95■■■■■ 5.27
UBP1-205ENST00000456378 PABPN1Q86U42 306 aaKnown RBP eCLIP47.85■■■■■ 5.25
UBP1-205ENST00000456378 BICRAQ9NZM4 1560 aa47.65■■■■■ 5.22
UBP1-205ENST00000456378 DNAJC5BQ9UF47 199 aa47.44■■■■■ 5.18
UBP1-205ENST00000456378 SCRIBQ14160 1630 aa47.39■■■■■ 5.18
UBP1-205ENST00000456378 SHROOM4Q9ULL8 1493 aa46.98■■■■■ 5.11
UBP1-205ENST00000456378 EIF4G1Q04637 1599 aaKnown RBP46.37■■■■■ 5.01
UBP1-205ENST00000456378 CC2D2AQ9P2K1 1620 aa46.28■■■■■ 5
UBP1-205ENST00000456378 CECR2Q9BXF3 1484 aa46.03■■■■■ 4.96
UBP1-205ENST00000456378 SMARCA4P51532 1647 aa45.29■■■■■ 4.84
UBP1-205ENST00000456378 NCAPD3P42695 1498 aa45.18■■■■■ 4.82
UBP1-205ENST00000456378 ATAD2BQ9ULI0 1458 aa45.17■■■■■ 4.82
UBP1-205ENST00000456378 BAZ1AQ9NRL2 1556 aaPredicted RBP45.16■■■■■ 4.82
UBP1-205ENST00000456378 SMARCA2P51531 1590 aa45.02■■■■■ 4.8
UBP1-205ENST00000456378 MROH2BQ7Z745 1585 aa44.97■■■■■ 4.79
UBP1-205ENST00000456378 HMGXB3Q12766 1538 aa44.87■■■■■ 4.77
UBP1-205ENST00000456378 PEG3Q9GZU2 1588 aa44.85■■■■■ 4.77
UBP1-205ENST00000456378 BAZ1BQ9UIG0 1483 aaKnown RBP44.72■■■■■ 4.75
UBP1-205ENST00000456378 WIZO95785 1651 aa44.45■■■■■ 4.71
UBP1-205ENST00000456378 RSF1Q96T23 1441 aaPredicted RBP44.33■■■■■ 4.69
UBP1-205ENST00000456378 NESP48681 1621 aa44.24■■■■■ 4.67
UBP1-205ENST00000456378 ERCC6Q03468 1493 aa44.09■■■■■ 4.65
UBP1-205ENST00000456378 LAMC3Q9Y6N6 1575 aa43.97■■■■■ 4.63
UBP1-205ENST00000456378 TOP2AP11388 1531 aaKnown RBP43.91■■■■■ 4.62
UBP1-205ENST00000456378 CADPSQ9ULU8 1353 aa43.85■■■■■ 4.61
UBP1-205ENST00000456378 CUX2O14529 1486 aa43.74■■■■■ 4.59
UBP1-205ENST00000456378 PDS5BQ9NTI5 1447 aa43.71■■■■■ 4.59
UBP1-205ENST00000456378 KIF21AQ7Z4S6 1674 aa43.64■■■■■ 4.58
UBP1-205ENST00000456378 THOC2Q8NI27 1593 aaKnown RBP43.58■■■■■ 4.57
UBP1-205ENST00000456378 CFTRP13569 1480 aa43.51■■■■■ 4.56
UBP1-205ENST00000456378 CCDC88BA6NC98 1476 aa43.46■■■■■ 4.55
UBP1-205ENST00000456378 FANCD2Q9BXW9 1451 aa43.33■■■■■ 4.53
UBP1-205ENST00000456378 MRC2Q9UBG0 1479 aa43.3■■■■■ 4.52
UBP1-205ENST00000456378 CEP164Q9UPV0 1460 aa43.27■■■■■ 4.52
UBP1-205ENST00000456378 WDR62O43379 1518 aa43.17■■■■■ 4.5
UBP1-205ENST00000456378 PRDM2Q13029 1718 aa43.05■■■■■ 4.48
UBP1-205ENST00000456378 SUPT5HO00267 1087 aaKnown RBP42.98■■■■■ 4.47
UBP1-205ENST00000456378 URB2Q14146 1524 aaKnown RBP42.96■■■■■ 4.47
UBP1-205ENST00000456378 DNAJC5Q9H3Z4 198 aa42.89■■■■■ 4.46
UBP1-205ENST00000456378 TOPBP1Q92547 1522 aa42.61■■■■■ 4.41
UBP1-205ENST00000456378 ABCC8Q09428 1581 aa42.52■■■■■ 4.4
UBP1-205ENST00000456378 DNMBPQ6XZF7 1577 aa42.49■■■■■ 4.39
UBP1-205ENST00000456378 IFT140Q96RY7 1462 aa42.39■■■■■ 4.38
UBP1-205ENST00000456378 ZNF608Q9ULD9 1512 aaPredicted RBP42.3■■■■■ 4.36
UBP1-205ENST00000456378 POLA1P09884 1462 aaPredicted RBP42.23■■■■■ 4.35
UBP1-205ENST00000456378 CUX1P39880 1505 aa42.19■■■■■ 4.34
UBP1-205ENST00000456378 TARBP1Q13395 1621 aaKnown RBP42.17■■■■■ 4.34
UBP1-205ENST00000456378 RAD54L2Q9Y4B4 1467 aa42.1■■■■■ 4.33
UBP1-205ENST00000456378 FGD5Q6ZNL6 1462 aa42.08■■■■■ 4.33
UBP1-205ENST00000456378 SOGA1O94964 1423 aa42.06■■■■■ 4.32
UBP1-205ENST00000456378 EIF4G3O43432 1585 aaKnown RBP42.05■■■■■ 4.32
UBP1-205ENST00000456378 AQRO60306 1485 aaKnown RBP eCLIP42.03■■■■■ 4.32
UBP1-205ENST00000456378 OSCARQ8IYS5 282 aa41.93■■■■■ 4.3
UBP1-205ENST00000456378 TDRD9Q8NDG6 1382 aaKnown RBP41.89■■■■■ 4.3
UBP1-205ENST00000456378 WRNQ14191 1432 aaPredicted RBP eCLIP41.77■■■■■ 4.28
UBP1-205ENST00000456378 WDR97A6NE52 1622 aa41.72■■■■■ 4.27
UBP1-205ENST00000456378 SYNJ1O43426 1573 aa41.7■■■■■ 4.27
UBP1-205ENST00000456378 TOP2BQ02880 1626 aa41.69■■■■■ 4.27
UBP1-205ENST00000456378 BIVM-ERCC5R4GMW8 1640 aa41.68■■■■■ 4.26
UBP1-205ENST00000456378 ABCA10Q8WWZ4 1543 aa41.64■■■■■ 4.26
UBP1-205ENST00000456378 CHD1O14646 1710 aa41.58■■■■■ 4.25
UBP1-205ENST00000456378 SNAPC4Q5SXM2 1469 aa41.58■■■■■ 4.25
UBP1-205ENST00000456378 GRIN2BQ13224 1484 aa41.57■■■■■ 4.25
UBP1-205ENST00000456378 FBLN2P98095 1184 aa41.56■■■■■ 4.24
UBP1-205ENST00000456378 GAPVD1Q14C86 1478 aa41.54■■■■■ 4.24
UBP1-205ENST00000456378 ABCA5Q8WWZ7 1642 aa41.49■■■■■ 4.23
UBP1-205ENST00000456378 MAGI1Q96QZ7 1491 aaPredicted RBP41.47■■■■■ 4.23
UBP1-205ENST00000456378 PBRM1Q86U86 1689 aa41.43■■■■■ 4.22
UBP1-205ENST00000456378 CHMP7Q8WUX9 453 aaPredicted RBP41.38■■■■■ 4.21
UBP1-205ENST00000456378 SYNJ2O15056 1496 aa41.34■■■■■ 4.21
UBP1-205ENST00000456378 TRIM41Q8WV44 630 aa41.32■■■■■ 4.21
UBP1-205ENST00000456378 RIMBP3CA6NJZ7 1639 aa41.28■■■■■ 4.2
UBP1-205ENST00000456378 RIMBP3BA6NNM3 1639 aa41.28■■■■■ 4.2
UBP1-205ENST00000456378 RIMBP3Q9UFD9 1639 aa41.28■■■■■ 4.2
UBP1-205ENST00000456378 ARHGEF11O15085 1522 aa41.23■■■■■ 4.19
UBP1-205ENST00000456378 CLASP1Q7Z460 1538 aa41.15■■■■■ 4.18
UBP1-205ENST00000456378 ERICH3Q5RHP9 1530 aa41.11■■■■■ 4.17
UBP1-205ENST00000456378 ADAMTS12P58397 1594 aa41.11■■■■■ 4.17
UBP1-205ENST00000456378 GRIN2AQ12879 1464 aa41.04■■■■■ 4.16
UBP1-205ENST00000456378 FHAD1B1AJZ9 1412 aa41.04■■■■■ 4.16
UBP1-205ENST00000456378 CYB5RLQ6IPT4 315 aa40.93■■■■■ 4.14
UBP1-205ENST00000456378 ARAP1Q96P48 1450 aa40.91■■■■■ 4.14
UBP1-205ENST00000456378 NUP160Q12769 1436 aa40.9■■■■■ 4.14
UBP1-205ENST00000456378 KIF27Q86VH2 1401 aa40.9■■■■■ 4.14
UBP1-205ENST00000456378 CEP170Q5SW79 1584 aa40.88■■■■■ 4.13
UBP1-205ENST00000456378 IGF1RP08069 1367 aa40.86■■■■■ 4.13
UBP1-205ENST00000456378 CUL7Q14999 1698 aa40.63■■■■■ 4.1
UBP1-205ENST00000456378 ERCC6L2Q5T890 1561 aa40.62■■■■■ 4.09
UBP1-205ENST00000456378 SHROOM2Q13796 1616 aa40.6■■■■■ 4.09
UBP1-205ENST00000456378 CARMIL1Q5VZK9 1371 aa40.57■■■■■ 4.08
UBP1-205ENST00000456378 RUSC2Q8N2Y8 1516 aa40.55■■■■■ 4.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms