RNA–Protein interactions for RNA: ENST00000409332.5

UBE2F-202, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 5 BASIC

Gene UBE2F, Length 1,138 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-202ENST00000409332 NISCHQ9Y2I1 1504 aa41.34■■■■■ 4.21
UBE2F-202ENST00000409332 ABCC9O60706 1549 aa37.68■■■■□ 3.62
UBE2F-202ENST00000409332 CCDC180Q9P1Z9 1646 aa37.28■■■■□ 3.56
UBE2F-202ENST00000409332 DNAJC5BQ9UF47 199 aa35.67■■■■□ 3.3
UBE2F-202ENST00000409332 RB1CC1Q8TDY2 1594 aa35.66■■■■□ 3.3
UBE2F-202ENST00000409332 NACADO15069 1562 aa35.3■■■■□ 3.24
UBE2F-202ENST00000409332 DCAF8L2P0C7V8 631 aa35.11■■■■□ 3.21
UBE2F-202ENST00000409332 PABPN1Q86U42 306 aaKnown RBP eCLIP35.01■■■■□ 3.2
UBE2F-202ENST00000409332 UNC13AQ9UPW8 1703 aa34.94■■■■□ 3.18
UBE2F-202ENST00000409332 BICRAQ9NZM4 1560 aa34.66■■■■□ 3.14
UBE2F-202ENST00000409332 MYO15BQ96JP2 1530 aa34.65■■■■□ 3.14
UBE2F-202ENST00000409332 ZCCHC6Q5VYS8 1495 aaKnown RBP34.19■■■■□ 3.06
UBE2F-202ENST00000409332 DCAF1Q9Y4B6 1507 aa34.09■■■■□ 3.05
UBE2F-202ENST00000409332 SHROOM4Q9ULL8 1493 aa34.07■■■■□ 3.04
UBE2F-202ENST00000409332 CC2D2AQ9P2K1 1620 aa34.02■■■■□ 3.04
UBE2F-202ENST00000409332 SCRIBQ14160 1630 aa34■■■■□ 3.03
UBE2F-202ENST00000409332 CECR2Q9BXF3 1484 aa33.95■■■■□ 3.03
UBE2F-202ENST00000409332 EIF4G1Q04637 1599 aaKnown RBP33.84■■■■□ 3.01
UBE2F-202ENST00000409332 DNAJC5Q9H3Z4 198 aa32.99■■■□□ 2.87
UBE2F-202ENST00000409332 NCAPD3P42695 1498 aa32.58■■■□□ 2.81
UBE2F-202ENST00000409332 CUX2O14529 1486 aa32.57■■■□□ 2.8
UBE2F-202ENST00000409332 ERCC6Q03468 1493 aa32.54■■■□□ 2.8
UBE2F-202ENST00000409332 ATAD2BQ9ULI0 1458 aa32.46■■■□□ 2.79
UBE2F-202ENST00000409332 SMARCA4P51532 1647 aa32.36■■■□□ 2.77
UBE2F-202ENST00000409332 SMARCA2P51531 1590 aa32.34■■■□□ 2.77
UBE2F-202ENST00000409332 HMGXB3Q12766 1538 aa32.32■■■□□ 2.76
UBE2F-202ENST00000409332 NESP48681 1621 aa32.27■■■□□ 2.76
UBE2F-202ENST00000409332 BAZ1BQ9UIG0 1483 aaKnown RBP32.13■■■□□ 2.73
UBE2F-202ENST00000409332 BAZ1AQ9NRL2 1556 aaPredicted RBP32.11■■■□□ 2.73
UBE2F-202ENST00000409332 THOC2Q8NI27 1593 aaKnown RBP32.01■■■□□ 2.71
UBE2F-202ENST00000409332 PEG3Q9GZU2 1588 aa32.01■■■□□ 2.71
UBE2F-202ENST00000409332 LAMC3Q9Y6N6 1575 aa31.94■■■□□ 2.7
UBE2F-202ENST00000409332 MROH2BQ7Z745 1585 aa31.88■■■□□ 2.69
UBE2F-202ENST00000409332 KIF21AQ7Z4S6 1674 aa31.87■■■□□ 2.69
UBE2F-202ENST00000409332 PDS5BQ9NTI5 1447 aa31.75■■■□□ 2.67
UBE2F-202ENST00000409332 CADPSQ9ULU8 1353 aa31.58■■■□□ 2.65
UBE2F-202ENST00000409332 WIZO95785 1651 aa31.52■■■□□ 2.64
UBE2F-202ENST00000409332 MRC2Q9UBG0 1479 aa31.52■■■□□ 2.64
UBE2F-202ENST00000409332 WDR62O43379 1518 aa31.46■■■□□ 2.63
UBE2F-202ENST00000409332 TRIM41Q8WV44 630 aa31.45■■■□□ 2.63
UBE2F-202ENST00000409332 CEP164Q9UPV0 1460 aa31.33■■■□□ 2.61
UBE2F-202ENST00000409332 FANCD2Q9BXW9 1451 aa31.26■■■□□ 2.59
UBE2F-202ENST00000409332 CFTRP13569 1480 aa31.15■■■□□ 2.58
UBE2F-202ENST00000409332 RSF1Q96T23 1441 aaPredicted RBP31.05■■■□□ 2.56
UBE2F-202ENST00000409332 TOP2AP11388 1531 aaKnown RBP31.04■■■□□ 2.56
UBE2F-202ENST00000409332 URB2Q14146 1524 aaKnown RBP31.03■■■□□ 2.56
UBE2F-202ENST00000409332 OSCARQ8IYS5 282 aa31.02■■■□□ 2.56
UBE2F-202ENST00000409332 PRDM2Q13029 1718 aa30.88■■■□□ 2.53
UBE2F-202ENST00000409332 RIMBP3CA6NJZ7 1639 aa30.73■■■□□ 2.51
UBE2F-202ENST00000409332 RIMBP3BA6NNM3 1639 aa30.73■■■□□ 2.51
UBE2F-202ENST00000409332 RIMBP3Q9UFD9 1639 aa30.73■■■□□ 2.51
UBE2F-202ENST00000409332 ZNF608Q9ULD9 1512 aaPredicted RBP30.73■■■□□ 2.51
UBE2F-202ENST00000409332 CCDC88BA6NC98 1476 aa30.7■■■□□ 2.5
UBE2F-202ENST00000409332 IFT140Q96RY7 1462 aa30.69■■■□□ 2.5
UBE2F-202ENST00000409332 TOPBP1Q92547 1522 aa30.63■■■□□ 2.49
UBE2F-202ENST00000409332 ARHGEF11O15085 1522 aa30.57■■■□□ 2.48
UBE2F-202ENST00000409332 EIF4G3O43432 1585 aaKnown RBP30.55■■■□□ 2.48
UBE2F-202ENST00000409332 ABCC8Q09428 1581 aa30.48■■■□□ 2.47
UBE2F-202ENST00000409332 DNMBPQ6XZF7 1577 aa30.48■■■□□ 2.47
UBE2F-202ENST00000409332 CHD1O14646 1710 aa30.42■■■□□ 2.46
UBE2F-202ENST00000409332 TARBP1Q13395 1621 aaKnown RBP30.4■■■□□ 2.46
UBE2F-202ENST00000409332 AQRO60306 1485 aaKnown RBP eCLIP30.39■■■□□ 2.463e-6■■■□□ 18.3
UBE2F-202ENST00000409332 CYB5RLQ6IPT4 315 aa30.36■■■□□ 2.45
UBE2F-202ENST00000409332 POLA1P09884 1462 aaPredicted RBP30.29■■■□□ 2.44
UBE2F-202ENST00000409332 FBLN2P98095 1184 aa30.28■■■□□ 2.44
UBE2F-202ENST00000409332 ARAP1Q96P48 1450 aa30.25■■■□□ 2.43
UBE2F-202ENST00000409332 RAD54L2Q9Y4B4 1467 aa30.2■■■□□ 2.43
UBE2F-202ENST00000409332 TRHP20396 242 aaPredicted RBP30.16■■■□□ 2.42
UBE2F-202ENST00000409332 TDRD9Q8NDG6 1382 aaKnown RBP30.14■■■□□ 2.41
UBE2F-202ENST00000409332 SOGA1O94964 1423 aa30.13■■■□□ 2.41
UBE2F-202ENST00000409332 SNAPC4Q5SXM2 1469 aa30.07■■■□□ 2.4
UBE2F-202ENST00000409332 FGD5Q6ZNL6 1462 aa30.06■■■□□ 2.4
UBE2F-202ENST00000409332 CLASP1Q7Z460 1538 aa30.01■■■□□ 2.4
UBE2F-202ENST00000409332 WDR97A6NE52 1622 aa30■■■□□ 2.39
UBE2F-202ENST00000409332 CUX1P39880 1505 aa29.97■■■□□ 2.39
UBE2F-202ENST00000409332 CHMP7Q8WUX9 453 aaPredicted RBP29.96■■■□□ 2.39
UBE2F-202ENST00000409332 SYNJ1O43426 1573 aa29.95■■■□□ 2.39
UBE2F-202ENST00000409332 MAGI1Q96QZ7 1491 aaPredicted RBP29.93■■■□□ 2.38
UBE2F-202ENST00000409332 GRIN2BQ13224 1484 aa29.91■■■□□ 2.38
UBE2F-202ENST00000409332 SYNJ2O15056 1496 aa29.86■■■□□ 2.37
UBE2F-202ENST00000409332 PBRM1Q86U86 1689 aa29.84■■■□□ 2.37
UBE2F-202ENST00000409332 GAPVD1Q14C86 1478 aa29.76■■■□□ 2.35
UBE2F-202ENST00000409332 ABCA5Q8WWZ7 1642 aa29.69■■■□□ 2.34
UBE2F-202ENST00000409332 ABCA10Q8WWZ4 1543 aa29.66■■■□□ 2.34
UBE2F-202ENST00000409332 ERCC6L2Q5T890 1561 aa29.56■■■□□ 2.32
UBE2F-202ENST00000409332 AEBP2Q6ZN18 517 aaPredicted RBP29.55■■■□□ 2.32
UBE2F-202ENST00000409332 GRIN2AQ12879 1464 aa29.54■■■□□ 2.32
UBE2F-202ENST00000409332 ADAMTS12P58397 1594 aa29.49■■■□□ 2.31
UBE2F-202ENST00000409332 CEP170Q5SW79 1584 aa29.48■■■□□ 2.31
UBE2F-202ENST00000409332 WRNQ14191 1432 aaPredicted RBP eCLIP29.46■■■□□ 2.31
UBE2F-202ENST00000409332 SUPT5HO00267 1087 aaKnown RBP29.44■■■□□ 2.3
UBE2F-202ENST00000409332 NUP160Q12769 1436 aa29.43■■■□□ 2.3
UBE2F-202ENST00000409332 BIVM-ERCC5R4GMW8 1640 aa29.4■■■□□ 2.3
UBE2F-202ENST00000409332 TOP2BQ02880 1626 aa29.38■■■□□ 2.29
UBE2F-202ENST00000409332 SHROOM2Q13796 1616 aa29.38■■■□□ 2.29
UBE2F-202ENST00000409332 FHAD1B1AJZ9 1412 aa29.35■■■□□ 2.29
UBE2F-202ENST00000409332 ERICH3Q5RHP9 1530 aa29.29■■■□□ 2.28
UBE2F-202ENST00000409332 KIF13AQ9H1H9 1805 aa29.23■■■□□ 2.27
UBE2F-202ENST00000409332 PRG4Q92954 1404 aaPredicted RBP29.2■■■□□ 2.27
UBE2F-202ENST00000409332 JPH4Q96JJ6 628 aa29.13■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms