RNA–Protein interactions for RNA: ENST00000496310.1

UBP1-213, Transcript of upstream binding protein 1, humanhuman

TSL 4

Gene UBP1, Length 544 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1-213ENST00000496310 NISCHQ9Y2I1 1504 aa18.26■□□□□ 0.51
UBP1-213ENST00000496310 ABCC9O60706 1549 aa16.93■□□□□ 0.3
UBP1-213ENST00000496310 CCDC180Q9P1Z9 1646 aa16.51■□□□□ 0.23
UBP1-213ENST00000496310 DNAJC5BQ9UF47 199 aa16.2■□□□□ 0.18
UBP1-213ENST00000496310 RB1CC1Q8TDY2 1594 aa15.86■□□□□ 0.13
UBP1-213ENST00000496310 PABPN1Q86U42 306 aaKnown RBP eCLIP15.75■□□□□ 0.11
UBP1-213ENST00000496310 DCAF8L2P0C7V8 631 aa15.72■□□□□ 0.11
UBP1-213ENST00000496310 UNC13AQ9UPW8 1703 aa15.71■□□□□ 0.11
UBP1-213ENST00000496310 NACADO15069 1562 aa15.65■□□□□ 0.1
UBP1-213ENST00000496310 BICRAQ9NZM4 1560 aa15.49■□□□□ 0.07
UBP1-213ENST00000496310 CC2D2AQ9P2K1 1620 aa15.26■□□□□ 0.03
UBP1-213ENST00000496310 MYO15BQ96JP2 1530 aa15.22■□□□□ 0.03
UBP1-213ENST00000496310 CECR2Q9BXF3 1484 aa15.21■□□□□ 0.03
UBP1-213ENST00000496310 SCRIBQ14160 1630 aa15.15■□□□□ 0.02
UBP1-213ENST00000496310 EIF4G1Q04637 1599 aaKnown RBP15.1■□□□□ 0.01
UBP1-213ENST00000496310 ZCCHC6Q5VYS8 1495 aaKnown RBP15.04■□□□□ -0
UBP1-213ENST00000496310 SHROOM4Q9ULL8 1493 aa15.01□□□□□ -0.01
UBP1-213ENST00000496310 DNAJC5Q9H3Z4 198 aa15□□□□□ -0.01
UBP1-213ENST00000496310 DCAF1Q9Y4B6 1507 aa14.95□□□□□ -0.02
UBP1-213ENST00000496310 ERCC6Q03468 1493 aa14.58□□□□□ -0.08
UBP1-213ENST00000496310 CUX2O14529 1486 aa14.57□□□□□ -0.08
UBP1-213ENST00000496310 AEBP2Q6ZN18 517 aaPredicted RBP14.5□□□□□ -0.09
UBP1-213ENST00000496310 NESP48681 1621 aa14.48□□□□□ -0.09
UBP1-213ENST00000496310 NCAPD3P42695 1498 aa14.44□□□□□ -0.1
UBP1-213ENST00000496310 ATAD2BQ9ULI0 1458 aa14.41□□□□□ -0.1
UBP1-213ENST00000496310 SMARCA4P51532 1647 aa14.35□□□□□ -0.11
UBP1-213ENST00000496310 TRIM41Q8WV44 630 aa14.33□□□□□ -0.12
UBP1-213ENST00000496310 THOC2Q8NI27 1593 aaKnown RBP14.33□□□□□ -0.12
UBP1-213ENST00000496310 SMARCA2P51531 1590 aa14.31□□□□□ -0.12
UBP1-213ENST00000496310 KIF21AQ7Z4S6 1674 aa14.31□□□□□ -0.12
UBP1-213ENST00000496310 HMGXB3Q12766 1538 aa14.3□□□□□ -0.12
UBP1-213ENST00000496310 BAZ1BQ9UIG0 1483 aaKnown RBP14.25□□□□□ -0.13
UBP1-213ENST00000496310 LAMC3Q9Y6N6 1575 aa14.19□□□□□ -0.14
UBP1-213ENST00000496310 BAZ1AQ9NRL2 1556 aaPredicted RBP14.17□□□□□ -0.14
UBP1-213ENST00000496310 MROH2BQ7Z745 1585 aa14.13□□□□□ -0.15
UBP1-213ENST00000496310 PEG3Q9GZU2 1588 aa14.12□□□□□ -0.15
UBP1-213ENST00000496310 CHIC1Q5VXU3 224 aa14.11□□□□□ -0.15
UBP1-213ENST00000496310 PDS5BQ9NTI5 1447 aa14.09□□□□□ -0.15
UBP1-213ENST00000496310 MRC2Q9UBG0 1479 aa14.04□□□□□ -0.16
UBP1-213ENST00000496310 WIZO95785 1651 aa14.01□□□□□ -0.17
UBP1-213ENST00000496310 WDR62O43379 1518 aa14.01□□□□□ -0.17
UBP1-213ENST00000496310 CADPSQ9ULU8 1353 aa14.01□□□□□ -0.17
UBP1-213ENST00000496310 CEP164Q9UPV0 1460 aa13.92□□□□□ -0.18
UBP1-213ENST00000496310 OSCARQ8IYS5 282 aa13.91□□□□□ -0.18
UBP1-213ENST00000496310 FANCD2Q9BXW9 1451 aa13.89□□□□□ -0.19
UBP1-213ENST00000496310 RIMBP3CA6NJZ7 1639 aa13.85□□□□□ -0.19
UBP1-213ENST00000496310 RIMBP3BA6NNM3 1639 aa13.85□□□□□ -0.19
UBP1-213ENST00000496310 RIMBP3Q9UFD9 1639 aa13.85□□□□□ -0.19
UBP1-213ENST00000496310 URB2Q14146 1524 aaKnown RBP13.83□□□□□ -0.2
UBP1-213ENST00000496310 CFTRP13569 1480 aa13.78□□□□□ -0.2
UBP1-213ENST00000496310 PRDM2Q13029 1718 aa13.75□□□□□ -0.21
UBP1-213ENST00000496310 ZNF608Q9ULD9 1512 aaPredicted RBP13.74□□□□□ -0.21
UBP1-213ENST00000496310 ARHGEF11O15085 1522 aa13.71□□□□□ -0.21
UBP1-213ENST00000496310 CYB5RLQ6IPT4 315 aa13.7□□□□□ -0.22
UBP1-213ENST00000496310 TOP2AP11388 1531 aaKnown RBP13.69□□□□□ -0.22
UBP1-213ENST00000496310 CHD1O14646 1710 aa13.68□□□□□ -0.22
UBP1-213ENST00000496310 RSF1Q96T23 1441 aaPredicted RBP13.67□□□□□ -0.22
UBP1-213ENST00000496310 TRHP20396 242 aaPredicted RBP13.65□□□□□ -0.22
UBP1-213ENST00000496310 EIF4G3O43432 1585 aaKnown RBP13.62□□□□□ -0.23
UBP1-213ENST00000496310 IFT140Q96RY7 1462 aa13.62□□□□□ -0.23
UBP1-213ENST00000496310 TOPBP1Q92547 1522 aa13.61□□□□□ -0.23
UBP1-213ENST00000496310 FBLN2P98095 1184 aa13.58□□□□□ -0.24
UBP1-213ENST00000496310 CCDC88BA6NC98 1476 aa13.58□□□□□ -0.24
UBP1-213ENST00000496310 AQRO60306 1485 aaKnown RBP eCLIP13.57□□□□□ -0.24
UBP1-213ENST00000496310 ARAP1Q96P48 1450 aa13.57□□□□□ -0.24
UBP1-213ENST00000496310 TARBP1Q13395 1621 aaKnown RBP13.53□□□□□ -0.24
UBP1-213ENST00000496310 DNMBPQ6XZF7 1577 aa13.51□□□□□ -0.25
UBP1-213ENST00000496310 RAD54L2Q9Y4B4 1467 aa13.47□□□□□ -0.25
UBP1-213ENST00000496310 ABCC8Q09428 1581 aa13.45□□□□□ -0.26
UBP1-213ENST00000496310 POLA1P09884 1462 aaPredicted RBP13.44□□□□□ -0.26
UBP1-213ENST00000496310 TDRD9Q8NDG6 1382 aaKnown RBP13.44□□□□□ -0.26
UBP1-213ENST00000496310 SNAPC4Q5SXM2 1469 aa13.4□□□□□ -0.26
UBP1-213ENST00000496310 CLASP1Q7Z460 1538 aa13.39□□□□□ -0.27
UBP1-213ENST00000496310 SOGA1O94964 1423 aa13.38□□□□□ -0.27
UBP1-213ENST00000496310 CHMP7Q8WUX9 453 aaPredicted RBP13.35□□□□□ -0.27
UBP1-213ENST00000496310 FGD5Q6ZNL6 1462 aa13.34□□□□□ -0.27
UBP1-213ENST00000496310 SYNJ1O43426 1573 aa13.33□□□□□ -0.28
UBP1-213ENST00000496310 PBRM1Q86U86 1689 aa13.31□□□□□ -0.28
UBP1-213ENST00000496310 CUX1P39880 1505 aa13.29□□□□□ -0.28
UBP1-213ENST00000496310 WDR97A6NE52 1622 aa13.28□□□□□ -0.28
UBP1-213ENST00000496310 GAPVD1Q14C86 1478 aa13.27□□□□□ -0.29
UBP1-213ENST00000496310 ERCC6L2Q5T890 1561 aa13.27□□□□□ -0.29
UBP1-213ENST00000496310 GRIN2BQ13224 1484 aa13.26□□□□□ -0.29
UBP1-213ENST00000496310 MAGI1Q96QZ7 1491 aaPredicted RBP13.26□□□□□ -0.29
UBP1-213ENST00000496310 SYNJ2O15056 1496 aa13.25□□□□□ -0.29
UBP1-213ENST00000496310 KIF13AQ9H1H9 1805 aa13.19□□□□□ -0.3
UBP1-213ENST00000496310 ABCA5Q8WWZ7 1642 aa13.16□□□□□ -0.3
UBP1-213ENST00000496310 CEP170Q5SW79 1584 aa13.14□□□□□ -0.31
UBP1-213ENST00000496310 GRIN2AQ12879 1464 aa13.1□□□□□ -0.31
UBP1-213ENST00000496310 ABCA10Q8WWZ4 1543 aa13.1□□□□□ -0.31
UBP1-213ENST00000496310 ADAMTS12P58397 1594 aa13.09□□□□□ -0.31
UBP1-213ENST00000496310 TSPOAP1O95153 1857 aa13.07□□□□□ -0.32
UBP1-213ENST00000496310 SHROOM2Q13796 1616 aa13.06□□□□□ -0.32
UBP1-213ENST00000496310 NUP160Q12769 1436 aa13.05□□□□□ -0.32
UBP1-213ENST00000496310 PRG4Q92954 1404 aaPredicted RBP13□□□□□ -0.33
UBP1-213ENST00000496310 FAM69CQ0P6D2 419 aa13□□□□□ -0.33
UBP1-213ENST00000496310 FHAD1B1AJZ9 1412 aa12.98□□□□□ -0.33
UBP1-213ENST00000496310 WRNQ14191 1432 aaPredicted RBP eCLIP12.97□□□□□ -0.33
UBP1-213ENST00000496310 KDM4FA0A1W2PPD8 638 aa12.97□□□□□ -0.33
UBP1-213ENST00000496310 SUPT5HO00267 1087 aaKnown RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms