RNA–Protein interactions for RNA: ENST00000496310.1

UBP1-213, Transcript of upstream binding protein 1, humanhuman

TSL 4

Gene UBP1, Length 544 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1-213ENST00000496310 NISCHQ9Y2I1 1504 aa18.26■□□□□ 0.51
UBP1-213ENST00000496310 ABCC9O60706 1549 aa16.93■□□□□ 0.3
UBP1-213ENST00000496310 CCDC180Q9P1Z9 1646 aa16.51■□□□□ 0.23
UBP1-213ENST00000496310 DNAJC5BQ9UF47 199 aa16.2■□□□□ 0.18
UBP1-213ENST00000496310 RB1CC1Q8TDY2 1594 aa15.86■□□□□ 0.13
UBP1-213ENST00000496310 PABPN1Q86U42 306 aaKnown RBP eCLIP15.75■□□□□ 0.11
UBP1-213ENST00000496310 DCAF8L2P0C7V8 631 aa15.72■□□□□ 0.11
UBP1-213ENST00000496310 UNC13AQ9UPW8 1703 aa15.71■□□□□ 0.11
UBP1-213ENST00000496310 NACADO15069 1562 aa15.65■□□□□ 0.1
UBP1-213ENST00000496310 BICRAQ9NZM4 1560 aa15.49■□□□□ 0.07
UBP1-213ENST00000496310 CC2D2AQ9P2K1 1620 aa15.26■□□□□ 0.03
UBP1-213ENST00000496310 MYO15BQ96JP2 1530 aa15.22■□□□□ 0.03
UBP1-213ENST00000496310 CECR2Q9BXF3 1484 aa15.21■□□□□ 0.03
UBP1-213ENST00000496310 SCRIBQ14160 1630 aa15.15■□□□□ 0.02
UBP1-213ENST00000496310 EIF4G1Q04637 1599 aaKnown RBP15.1■□□□□ 0.01
UBP1-213ENST00000496310 ZCCHC6Q5VYS8 1495 aaKnown RBP15.04■□□□□ -0
UBP1-213ENST00000496310 SHROOM4Q9ULL8 1493 aa15.01□□□□□ -0.01
UBP1-213ENST00000496310 DNAJC5Q9H3Z4 198 aa15□□□□□ -0.01
UBP1-213ENST00000496310 DCAF1Q9Y4B6 1507 aa14.95□□□□□ -0.02
UBP1-213ENST00000496310 ERCC6Q03468 1493 aa14.58□□□□□ -0.08
UBP1-213ENST00000496310 CUX2O14529 1486 aa14.57□□□□□ -0.08
UBP1-213ENST00000496310 AEBP2Q6ZN18 517 aaPredicted RBP14.5□□□□□ -0.09
UBP1-213ENST00000496310 NESP48681 1621 aa14.48□□□□□ -0.09
UBP1-213ENST00000496310 NCAPD3P42695 1498 aa14.44□□□□□ -0.1
UBP1-213ENST00000496310 ATAD2BQ9ULI0 1458 aa14.41□□□□□ -0.1
UBP1-213ENST00000496310 SMARCA4P51532 1647 aa14.35□□□□□ -0.11
UBP1-213ENST00000496310 TRIM41Q8WV44 630 aa14.33□□□□□ -0.12
UBP1-213ENST00000496310 THOC2Q8NI27 1593 aaKnown RBP14.33□□□□□ -0.12
UBP1-213ENST00000496310 SMARCA2P51531 1590 aa14.31□□□□□ -0.12
UBP1-213ENST00000496310 KIF21AQ7Z4S6 1674 aa14.31□□□□□ -0.12
UBP1-213ENST00000496310 HMGXB3Q12766 1538 aa14.3□□□□□ -0.12
UBP1-213ENST00000496310 BAZ1BQ9UIG0 1483 aaKnown RBP14.25□□□□□ -0.13
UBP1-213ENST00000496310 LAMC3Q9Y6N6 1575 aa14.19□□□□□ -0.14
UBP1-213ENST00000496310 BAZ1AQ9NRL2 1556 aaPredicted RBP14.17□□□□□ -0.14
UBP1-213ENST00000496310 MROH2BQ7Z745 1585 aa14.13□□□□□ -0.15
UBP1-213ENST00000496310 PEG3Q9GZU2 1588 aa14.12□□□□□ -0.15
UBP1-213ENST00000496310 CHIC1Q5VXU3 224 aa14.11□□□□□ -0.15
UBP1-213ENST00000496310 PDS5BQ9NTI5 1447 aa14.09□□□□□ -0.15
UBP1-213ENST00000496310 MRC2Q9UBG0 1479 aa14.04□□□□□ -0.16
UBP1-213ENST00000496310 WIZO95785 1651 aa14.01□□□□□ -0.17
UBP1-213ENST00000496310 WDR62O43379 1518 aa14.01□□□□□ -0.17
UBP1-213ENST00000496310 CADPSQ9ULU8 1353 aa14.01□□□□□ -0.17
UBP1-213ENST00000496310 CEP164Q9UPV0 1460 aa13.92□□□□□ -0.18
UBP1-213ENST00000496310 OSCARQ8IYS5 282 aa13.91□□□□□ -0.18
UBP1-213ENST00000496310 FANCD2Q9BXW9 1451 aa13.89□□□□□ -0.19
UBP1-213ENST00000496310 RIMBP3CA6NJZ7 1639 aa13.85□□□□□ -0.19
UBP1-213ENST00000496310 RIMBP3BA6NNM3 1639 aa13.85□□□□□ -0.19
UBP1-213ENST00000496310 RIMBP3Q9UFD9 1639 aa13.85□□□□□ -0.19
UBP1-213ENST00000496310 URB2Q14146 1524 aaKnown RBP13.83□□□□□ -0.2
UBP1-213ENST00000496310 CFTRP13569 1480 aa13.78□□□□□ -0.2
UBP1-213ENST00000496310 PRDM2Q13029 1718 aa13.75□□□□□ -0.21
UBP1-213ENST00000496310 ZNF608Q9ULD9 1512 aaPredicted RBP13.74□□□□□ -0.21
UBP1-213ENST00000496310 ARHGEF11O15085 1522 aa13.71□□□□□ -0.21
UBP1-213ENST00000496310 CYB5RLQ6IPT4 315 aa13.7□□□□□ -0.22
UBP1-213ENST00000496310 TOP2AP11388 1531 aaKnown RBP13.69□□□□□ -0.22
UBP1-213ENST00000496310 CHD1O14646 1710 aa13.68□□□□□ -0.22
UBP1-213ENST00000496310 RSF1Q96T23 1441 aaPredicted RBP13.67□□□□□ -0.22
UBP1-213ENST00000496310 TRHP20396 242 aaPredicted RBP13.65□□□□□ -0.22
UBP1-213ENST00000496310 EIF4G3O43432 1585 aaKnown RBP13.62□□□□□ -0.23
UBP1-213ENST00000496310 IFT140Q96RY7 1462 aa13.62□□□□□ -0.23
UBP1-213ENST00000496310 TOPBP1Q92547 1522 aa13.61□□□□□ -0.23
UBP1-213ENST00000496310 FBLN2P98095 1184 aa13.58□□□□□ -0.24
UBP1-213ENST00000496310 CCDC88BA6NC98 1476 aa13.58□□□□□ -0.24
UBP1-213ENST00000496310 AQRO60306 1485 aaKnown RBP eCLIP13.57□□□□□ -0.24
UBP1-213ENST00000496310 ARAP1Q96P48 1450 aa13.57□□□□□ -0.24
UBP1-213ENST00000496310 TARBP1Q13395 1621 aaKnown RBP13.53□□□□□ -0.24
UBP1-213ENST00000496310 DNMBPQ6XZF7 1577 aa13.51□□□□□ -0.25
UBP1-213ENST00000496310 RAD54L2Q9Y4B4 1467 aa13.47□□□□□ -0.25
UBP1-213ENST00000496310 ABCC8Q09428 1581 aa13.45□□□□□ -0.26
UBP1-213ENST00000496310 POLA1P09884 1462 aaPredicted RBP13.44□□□□□ -0.26
UBP1-213ENST00000496310 TDRD9Q8NDG6 1382 aaKnown RBP13.44□□□□□ -0.26
UBP1-213ENST00000496310 SNAPC4Q5SXM2 1469 aa13.4□□□□□ -0.26
UBP1-213ENST00000496310 CLASP1Q7Z460 1538 aa13.39□□□□□ -0.27
UBP1-213ENST00000496310 SOGA1O94964 1423 aa13.38□□□□□ -0.27
UBP1-213ENST00000496310 CHMP7Q8WUX9 453 aaPredicted RBP13.35□□□□□ -0.27
UBP1-213ENST00000496310 FGD5Q6ZNL6 1462 aa13.34□□□□□ -0.27
UBP1-213ENST00000496310 SYNJ1O43426 1573 aa13.33□□□□□ -0.28
UBP1-213ENST00000496310 PBRM1Q86U86 1689 aa13.31□□□□□ -0.28
UBP1-213ENST00000496310 CUX1P39880 1505 aa13.29□□□□□ -0.28
UBP1-213ENST00000496310 WDR97A6NE52 1622 aa13.28□□□□□ -0.28
UBP1-213ENST00000496310 GAPVD1Q14C86 1478 aa13.27□□□□□ -0.29
UBP1-213ENST00000496310 ERCC6L2Q5T890 1561 aa13.27□□□□□ -0.29
UBP1-213ENST00000496310 GRIN2BQ13224 1484 aa13.26□□□□□ -0.29
UBP1-213ENST00000496310 MAGI1Q96QZ7 1491 aaPredicted RBP13.26□□□□□ -0.29
UBP1-213ENST00000496310 SYNJ2O15056 1496 aa13.25□□□□□ -0.29
UBP1-213ENST00000496310 KIF13AQ9H1H9 1805 aa13.19□□□□□ -0.3
UBP1-213ENST00000496310 ABCA5Q8WWZ7 1642 aa13.16□□□□□ -0.3
UBP1-213ENST00000496310 CEP170Q5SW79 1584 aa13.14□□□□□ -0.31
UBP1-213ENST00000496310 GRIN2AQ12879 1464 aa13.1□□□□□ -0.31
UBP1-213ENST00000496310 ABCA10Q8WWZ4 1543 aa13.1□□□□□ -0.31
UBP1-213ENST00000496310 ADAMTS12P58397 1594 aa13.09□□□□□ -0.31
UBP1-213ENST00000496310 TSPOAP1O95153 1857 aa13.07□□□□□ -0.32
UBP1-213ENST00000496310 SHROOM2Q13796 1616 aa13.06□□□□□ -0.32
UBP1-213ENST00000496310 NUP160Q12769 1436 aa13.05□□□□□ -0.32
UBP1-213ENST00000496310 PRG4Q92954 1404 aaPredicted RBP13□□□□□ -0.33
UBP1-213ENST00000496310 FAM69CQ0P6D2 419 aa13□□□□□ -0.33
UBP1-213ENST00000496310 FHAD1B1AJZ9 1412 aa12.98□□□□□ -0.33
UBP1-213ENST00000496310 WRNQ14191 1432 aaPredicted RBP eCLIP12.97□□□□□ -0.33
UBP1-213ENST00000496310 KDM4FA0A1W2PPD8 638 aa12.97□□□□□ -0.33
UBP1-213ENST00000496310 SUPT5HO00267 1087 aaKnown RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms