RNA–Protein interactions for RNA: ENST00000454786.5

UBE2F-218, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 5

Gene UBE2F, Length 1,292 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-218ENST00000454786 NISCHQ9Y2I1 1504 aa43.49■■■■■ 4.55
UBE2F-218ENST00000454786 CCDC180Q9P1Z9 1646 aa39.29■■■■□ 3.88
UBE2F-218ENST00000454786 ABCC9O60706 1549 aa39.14■■■■□ 3.86
UBE2F-218ENST00000454786 RB1CC1Q8TDY2 1594 aa37.34■■■■□ 3.57
UBE2F-218ENST00000454786 NACADO15069 1562 aa37.02■■■■□ 3.52
UBE2F-218ENST00000454786 UNC13AQ9UPW8 1703 aa36.68■■■■□ 3.46
UBE2F-218ENST00000454786 DNAJC5BQ9UF47 199 aa36.62■■■■□ 3.45
UBE2F-218ENST00000454786 DCAF8L2P0C7V8 631 aa36.54■■■■□ 3.44
UBE2F-218ENST00000454786 MYO15BQ96JP2 1530 aa36.46■■■■□ 3.43
UBE2F-218ENST00000454786 PABPN1Q86U42 306 aaKnown RBP eCLIP36.28■■■■□ 3.4
UBE2F-218ENST00000454786 BICRAQ9NZM4 1560 aa36.22■■■■□ 3.39
UBE2F-218ENST00000454786 ZCCHC6Q5VYS8 1495 aaKnown RBP36.05■■■■□ 3.36
UBE2F-218ENST00000454786 DCAF1Q9Y4B6 1507 aa35.97■■■■□ 3.35
UBE2F-218ENST00000454786 SHROOM4Q9ULL8 1493 aa35.76■■■■□ 3.32
UBE2F-218ENST00000454786 SCRIBQ14160 1630 aa35.68■■■■□ 3.3
UBE2F-218ENST00000454786 CC2D2AQ9P2K1 1620 aa35.45■■■■□ 3.27
UBE2F-218ENST00000454786 EIF4G1Q04637 1599 aaKnown RBP35.34■■■■□ 3.25
UBE2F-218ENST00000454786 CECR2Q9BXF3 1484 aa35.28■■■■□ 3.24
UBE2F-218ENST00000454786 NCAPD3P42695 1498 aa34.07■■■■□ 3.04
UBE2F-218ENST00000454786 SMARCA4P51532 1647 aa34.04■■■■□ 3.04
UBE2F-218ENST00000454786 SMARCA2P51531 1590 aa33.97■■■■□ 3.03
UBE2F-218ENST00000454786 ATAD2BQ9ULI0 1458 aa33.96■■■■□ 3.03
UBE2F-218ENST00000454786 HMGXB3Q12766 1538 aa33.94■■■■□ 3.02
UBE2F-218ENST00000454786 CUX2O14529 1486 aa33.84■■■■□ 3.01
UBE2F-218ENST00000454786 ERCC6Q03468 1493 aa33.84■■■■□ 3.01
UBE2F-218ENST00000454786 BAZ1AQ9NRL2 1556 aaPredicted RBP33.83■■■■□ 3.01
UBE2F-218ENST00000454786 DNAJC5Q9H3Z4 198 aa33.75■■■□□ 2.99
UBE2F-218ENST00000454786 PEG3Q9GZU2 1588 aa33.7■■■□□ 2.99
UBE2F-218ENST00000454786 BAZ1BQ9UIG0 1483 aaKnown RBP33.69■■■□□ 2.98
UBE2F-218ENST00000454786 NESP48681 1621 aa33.6■■■□□ 2.97
UBE2F-218ENST00000454786 MROH2BQ7Z745 1585 aa33.5■■■□□ 2.95
UBE2F-218ENST00000454786 LAMC3Q9Y6N6 1575 aa33.47■■■□□ 2.95
UBE2F-218ENST00000454786 THOC2Q8NI27 1593 aaKnown RBP33.43■■■□□ 2.94
UBE2F-218ENST00000454786 KIF21AQ7Z4S6 1674 aa33.38■■■□□ 2.93
UBE2F-218ENST00000454786 WIZO95785 1651 aa33.19■■■□□ 2.9
UBE2F-218ENST00000454786 PDS5BQ9NTI5 1447 aa33.15■■■□□ 2.9
UBE2F-218ENST00000454786 CADPSQ9ULU8 1353 aa33■■■□□ 2.87
UBE2F-218ENST00000454786 MRC2Q9UBG0 1479 aa32.92■■■□□ 2.86
UBE2F-218ENST00000454786 WDR62O43379 1518 aa32.89■■■□□ 2.86
UBE2F-218ENST00000454786 CEP164Q9UPV0 1460 aa32.78■■■□□ 2.84
UBE2F-218ENST00000454786 TOP2AP11388 1531 aaKnown RBP32.74■■■□□ 2.83
UBE2F-218ENST00000454786 RSF1Q96T23 1441 aaPredicted RBP32.69■■■□□ 2.82
UBE2F-218ENST00000454786 FANCD2Q9BXW9 1451 aa32.69■■■□□ 2.82
UBE2F-218ENST00000454786 PRDM2Q13029 1718 aa32.69■■■□□ 2.82
UBE2F-218ENST00000454786 CFTRP13569 1480 aa32.66■■■□□ 2.82
UBE2F-218ENST00000454786 URB2Q14146 1524 aaKnown RBP32.44■■■□□ 2.78
UBE2F-218ENST00000454786 CCDC88BA6NC98 1476 aa32.26■■■□□ 2.75
UBE2F-218ENST00000454786 TRIM41Q8WV44 630 aa32.24■■■□□ 2.75
UBE2F-218ENST00000454786 OSCARQ8IYS5 282 aa32.11■■■□□ 2.73
UBE2F-218ENST00000454786 IFT140Q96RY7 1462 aa32.1■■■□□ 2.73
UBE2F-218ENST00000454786 TOPBP1Q92547 1522 aa32.08■■■□□ 2.73
UBE2F-218ENST00000454786 DNMBPQ6XZF7 1577 aa32.03■■■□□ 2.72
UBE2F-218ENST00000454786 ZNF608Q9ULD9 1512 aaPredicted RBP32.03■■■□□ 2.72
UBE2F-218ENST00000454786 ABCC8Q09428 1581 aa32.02■■■□□ 2.72
UBE2F-218ENST00000454786 EIF4G3O43432 1585 aaKnown RBP32.01■■■□□ 2.71
UBE2F-218ENST00000454786 RIMBP3CA6NJZ7 1639 aa31.93■■■□□ 2.7
UBE2F-218ENST00000454786 RIMBP3BA6NNM3 1639 aa31.93■■■□□ 2.7
UBE2F-218ENST00000454786 RIMBP3Q9UFD9 1639 aa31.93■■■□□ 2.7
UBE2F-218ENST00000454786 TARBP1Q13395 1621 aaKnown RBP31.88■■■□□ 2.69
UBE2F-218ENST00000454786 CHD1O14646 1710 aa31.87■■■□□ 2.69
UBE2F-218ENST00000454786 ARHGEF11O15085 1522 aa31.75■■■□□ 2.67
UBE2F-218ENST00000454786 POLA1P09884 1462 aaPredicted RBP31.74■■■□□ 2.67
UBE2F-218ENST00000454786 AQRO60306 1485 aaKnown RBP eCLIP31.68■■■□□ 2.663e-6■■■□□ 18.3
UBE2F-218ENST00000454786 WDR97A6NE52 1622 aa31.62■■■□□ 2.65
UBE2F-218ENST00000454786 RAD54L2Q9Y4B4 1467 aa31.58■■■□□ 2.65
UBE2F-218ENST00000454786 FGD5Q6ZNL6 1462 aa31.53■■■□□ 2.64
UBE2F-218ENST00000454786 SOGA1O94964 1423 aa31.51■■■□□ 2.64
UBE2F-218ENST00000454786 CUX1P39880 1505 aa31.49■■■□□ 2.63
UBE2F-218ENST00000454786 FBLN2P98095 1184 aa31.44■■■□□ 2.62
UBE2F-218ENST00000454786 SNAPC4Q5SXM2 1469 aa31.44■■■□□ 2.62
UBE2F-218ENST00000454786 TDRD9Q8NDG6 1382 aaKnown RBP31.43■■■□□ 2.62
UBE2F-218ENST00000454786 PBRM1Q86U86 1689 aa31.43■■■□□ 2.62
UBE2F-218ENST00000454786 ARAP1Q96P48 1450 aa31.41■■■□□ 2.62
UBE2F-218ENST00000454786 MAGI1Q96QZ7 1491 aaPredicted RBP31.38■■■□□ 2.61
UBE2F-218ENST00000454786 CLASP1Q7Z460 1538 aa31.37■■■□□ 2.61
UBE2F-218ENST00000454786 SYNJ1O43426 1573 aa31.36■■■□□ 2.61
UBE2F-218ENST00000454786 CYB5RLQ6IPT4 315 aa31.34■■■□□ 2.61
UBE2F-218ENST00000454786 GRIN2BQ13224 1484 aa31.33■■■□□ 2.61
UBE2F-218ENST00000454786 SYNJ2O15056 1496 aa31.25■■■□□ 2.59
UBE2F-218ENST00000454786 ABCA5Q8WWZ7 1642 aa31.24■■■□□ 2.59
UBE2F-218ENST00000454786 CHMP7Q8WUX9 453 aaPredicted RBP31.2■■■□□ 2.59
UBE2F-218ENST00000454786 GAPVD1Q14C86 1478 aa31.19■■■□□ 2.58
UBE2F-218ENST00000454786 ABCA10Q8WWZ4 1543 aa31.18■■■□□ 2.58
UBE2F-218ENST00000454786 BIVM-ERCC5R4GMW8 1640 aa31.1■■■□□ 2.57
UBE2F-218ENST00000454786 SUPT5HO00267 1087 aaKnown RBP31.07■■■□□ 2.56
UBE2F-218ENST00000454786 TRHP20396 242 aaPredicted RBP31.06■■■□□ 2.56
UBE2F-218ENST00000454786 TOP2BQ02880 1626 aa31.04■■■□□ 2.56
UBE2F-218ENST00000454786 ADAMTS12P58397 1594 aa31.01■■■□□ 2.56
UBE2F-218ENST00000454786 WRNQ14191 1432 aaPredicted RBP eCLIP30.98■■■□□ 2.55
UBE2F-218ENST00000454786 GRIN2AQ12879 1464 aa30.95■■■□□ 2.54
UBE2F-218ENST00000454786 CEP170Q5SW79 1584 aa30.89■■■□□ 2.54
UBE2F-218ENST00000454786 SHROOM2Q13796 1616 aa30.83■■■□□ 2.53
UBE2F-218ENST00000454786 ERCC6L2Q5T890 1561 aa30.82■■■□□ 2.52
UBE2F-218ENST00000454786 ERICH3Q5RHP9 1530 aa30.82■■■□□ 2.52
UBE2F-218ENST00000454786 NUP160Q12769 1436 aa30.81■■■□□ 2.52
UBE2F-218ENST00000454786 FHAD1B1AJZ9 1412 aa30.78■■■□□ 2.52
UBE2F-218ENST00000454786 RUSC2Q8N2Y8 1516 aa30.59■■■□□ 2.49
UBE2F-218ENST00000454786 KIF13AQ9H1H9 1805 aa30.55■■■□□ 2.48
UBE2F-218ENST00000454786 PRG4Q92954 1404 aaPredicted RBP30.48■■■□□ 2.47
UBE2F-218ENST00000454786 CUL7Q14999 1698 aa30.46■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms