RNA–Protein interactions for RNA: ENST00000612130.4

UBE2F-223, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

APPRIS P1 TSL 5 BASIC

Gene UBE2F, Length 2,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-223ENST00000612130 NISCHQ9Y2I1 1504 aa27.35■■□□□ 1.97
UBE2F-223ENST00000612130 SHROOM4Q9ULL8 1493 aa23.44■■□□□ 1.34
UBE2F-223ENST00000612130 ZCCHC6Q5VYS8 1495 aaKnown RBP23.27■■□□□ 1.32
UBE2F-223ENST00000612130 SUPT5HO00267 1087 aaKnown RBP23.2■■□□□ 1.3
UBE2F-223ENST00000612130 CCDC180Q9P1Z9 1646 aa23.15■■□□□ 1.3
UBE2F-223ENST00000612130 HRCP23327 699 aa23■■□□□ 1.27
UBE2F-223ENST00000612130 MYO15BQ96JP2 1530 aa22.93■■□□□ 1.26
UBE2F-223ENST00000612130 CHIC1Q5VXU3 224 aa22.87■■□□□ 1.25
UBE2F-223ENST00000612130 DCAF1Q9Y4B6 1507 aa22.59■■□□□ 1.21
UBE2F-223ENST00000612130 PCGF6Q9BYE7 350 aa22.55■■□□□ 1.2
UBE2F-223ENST00000612130 PPARGC1BQ86YN6 1023 aaKnown RBP22.28■■□□□ 1.16
UBE2F-223ENST00000612130 DCAF8L2P0C7V8 631 aa22.26■■□□□ 1.15
UBE2F-223ENST00000612130 TRIM26Q12899 539 aaPredicted RBP22.13■■□□□ 1.13
UBE2F-223ENST00000612130 LOC105371045A0A1W2PR82 267 aa22.1■■□□□ 1.13
UBE2F-223ENST00000612130 ABCC9O60706 1549 aa22.08■■□□□ 1.13
UBE2F-223ENST00000612130 ZEB1P37275 1124 aaPredicted RBP21.93■■□□□ 1.1
UBE2F-223ENST00000612130 RSF1Q96T23 1441 aaPredicted RBP21.79■■□□□ 1.08
UBE2F-223ENST00000612130 PELP1Q8IZL8 1130 aaKnown RBP21.73■■□□□ 1.07
UBE2F-223ENST00000612130 RB1CC1Q8TDY2 1594 aa21.69■■□□□ 1.06
UBE2F-223ENST00000612130 TRIM41Q8WV44 630 aa21.64■■□□□ 1.06
UBE2F-223ENST00000612130 SCRIBQ14160 1630 aa21.63■■□□□ 1.05
UBE2F-223ENST00000612130 SCAF1Q9H7N4 1312 aaKnown RBP21.42■■□□□ 1.02
UBE2F-223ENST00000612130 FAM9AQ8IZU1 332 aaPredicted RBP21.38■■□□□ 1.01
UBE2F-223ENST00000612130 NACADO15069 1562 aa21.25■□□□□ 0.99
UBE2F-223ENST00000612130 MROH2BQ7Z745 1585 aa21.24■□□□□ 0.99
UBE2F-223ENST00000612130 CECR2Q9BXF3 1484 aa21.22■□□□□ 0.99
UBE2F-223ENST00000612130 EIF4G1Q04637 1599 aaKnown RBP21.2■□□□□ 0.98
UBE2F-223ENST00000612130 BAZ1AQ9NRL2 1556 aaPredicted RBP21.17■□□□□ 0.98
UBE2F-223ENST00000612130 WIZO95785 1651 aa21.15■□□□□ 0.98
UBE2F-223ENST00000612130 ACIN1Q9UKV3 1341 aaKnown RBP21.11■□□□□ 0.97
UBE2F-223ENST00000612130 EHMT2Q96KQ7 1210 aa21.1■□□□□ 0.97
UBE2F-223ENST00000612130 CCER1Q8TC90 406 aaPredicted RBP21.07■□□□□ 0.96
UBE2F-223ENST00000612130 WRNQ14191 1432 aaPredicted RBP eCLIP21.07■□□□□ 0.96
UBE2F-223ENST00000612130 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.04■□□□□ 0.96
UBE2F-223ENST00000612130 NEUROD1Q13562 356 aa20.98■□□□□ 0.95
UBE2F-223ENST00000612130 CENPBP07199 599 aaPredicted RBP20.96■□□□□ 0.95
UBE2F-223ENST00000612130 DIEXFQ68CQ4 756 aaKnown RBP20.93■□□□□ 0.94
UBE2F-223ENST00000612130 TOP2AP11388 1531 aaKnown RBP20.91■□□□□ 0.94
UBE2F-223ENST00000612130 CEP162Q5TB80 1403 aa20.88■□□□□ 0.93
UBE2F-223ENST00000612130 TNIKQ9UKE5 1360 aa20.84■□□□□ 0.93
UBE2F-223ENST00000612130 MYT1Q01538 1121 aa20.83■□□□□ 0.93
UBE2F-223ENST00000612130 EEA1Q15075 1411 aa20.83■□□□□ 0.93
UBE2F-223ENST00000612130 CCDC88BA6NC98 1476 aa20.82■□□□□ 0.92
UBE2F-223ENST00000612130 ABCC8Q09428 1581 aa20.82■□□□□ 0.92
UBE2F-223ENST00000612130 GTF3C3Q9Y5Q9 886 aa20.81■□□□□ 0.92
UBE2F-223ENST00000612130 SMARCA2P51531 1590 aa20.78■□□□□ 0.92
UBE2F-223ENST00000612130 SMARCA4P51532 1647 aa20.76■□□□□ 0.91
UBE2F-223ENST00000612130 SOGA1O94964 1423 aa20.7■□□□□ 0.9
UBE2F-223ENST00000612130 ZNF316A6NFI3 1004 aaPredicted RBP20.69■□□□□ 0.9
UBE2F-223ENST00000612130 GOLGA3Q08378 1498 aa20.66■□□□□ 0.9
UBE2F-223ENST00000612130 CSRNP3Q8WYN3 585 aa20.62■□□□□ 0.89
UBE2F-223ENST00000612130 TTBK1Q5TCY1 1321 aaPredicted RBP20.58■□□□□ 0.89
UBE2F-223ENST00000612130 RUSC2Q8N2Y8 1516 aa20.55■□□□□ 0.88
UBE2F-223ENST00000612130 KIF21BO75037 1637 aa20.53■□□□□ 0.88
UBE2F-223ENST00000612130 UBTFP17480 764 aaKnown RBP20.52■□□□□ 0.88
UBE2F-223ENST00000612130 CEP164Q9UPV0 1460 aa20.5■□□□□ 0.87
UBE2F-223ENST00000612130 UNC13AQ9UPW8 1703 aa20.46■□□□□ 0.87
UBE2F-223ENST00000612130 VPS8Q8N3P4 1428 aa20.41■□□□□ 0.86
UBE2F-223ENST00000612130 BAZ1BQ9UIG0 1483 aaKnown RBP20.4■□□□□ 0.86
UBE2F-223ENST00000612130 PEG3Q9GZU2 1588 aa20.4■□□□□ 0.86
UBE2F-223ENST00000612130 CLIP1P30622 1438 aa20.39■□□□□ 0.86
UBE2F-223ENST00000612130 MIER1Q8N108 512 aa20.39■□□□□ 0.85
UBE2F-223ENST00000612130 YTHDC1Q96MU7 727 aaKnown RBP20.38■□□□□ 0.85
UBE2F-223ENST00000612130 SYNJ1O43426 1573 aa20.36■□□□□ 0.85
UBE2F-223ENST00000612130 HNRNPUL2Q1KMD3 747 aaKnown RBP20.31■□□□□ 0.84
UBE2F-223ENST00000612130 CLSPNQ9HAW4 1339 aa20.28■□□□□ 0.84
UBE2F-223ENST00000612130 APLP2Q06481 763 aa20.22■□□□□ 0.83
UBE2F-223ENST00000612130 RAPGEF2Q9Y4G8 1499 aa20.21■□□□□ 0.83
UBE2F-223ENST00000612130 BICRAQ9NZM4 1560 aa20.18■□□□□ 0.82
UBE2F-223ENST00000612130 DHX57Q6P158 1386 aaKnown RBP20.12■□□□□ 0.81
UBE2F-223ENST00000612130 ERICH3Q5RHP9 1530 aa20.12■□□□□ 0.81
UBE2F-223ENST00000612130 TOP2BQ02880 1626 aa20.11■□□□□ 0.81
UBE2F-223ENST00000612130 ATAD2BQ9ULI0 1458 aa20.07■□□□□ 0.8
UBE2F-223ENST00000612130 BIVM-ERCC5R4GMW8 1640 aa20.06■□□□□ 0.8
UBE2F-223ENST00000612130 ARAP1Q96P48 1450 aa20.04■□□□□ 0.8
UBE2F-223ENST00000612130 CUX2O14529 1486 aa20.03■□□□□ 0.8
UBE2F-223ENST00000612130 PRXQ9BXM0 1461 aa20.02■□□□□ 0.8
UBE2F-223ENST00000612130 RRBP1Q9P2E9 1410 aaKnown RBP20.01■□□□□ 0.79
UBE2F-223ENST00000612130 SUPT16HQ9Y5B9 1047 aaKnown RBP19.99■□□□□ 0.79
UBE2F-223ENST00000612130 PABPN1Q86U42 306 aaKnown RBP eCLIP19.94■□□□□ 0.78
UBE2F-223ENST00000612130 RANGAP1P46060 587 aaPredicted RBP19.87■□□□□ 0.77
UBE2F-223ENST00000612130 KANK4Q5T7N3 995 aaPredicted RBP19.86■□□□□ 0.77
UBE2F-223ENST00000612130 CCNB3Q8WWL7 1395 aa19.85■□□□□ 0.77
UBE2F-223ENST00000612130 KIF27Q86VH2 1401 aa19.8■□□□□ 0.76
UBE2F-223ENST00000612130 TSHZ2Q9NRE2 1034 aa19.78■□□□□ 0.76
UBE2F-223ENST00000612130 ARHGAP35Q9NRY4 1499 aa19.77■□□□□ 0.76
UBE2F-223ENST00000612130 CUX1P39880 1505 aa19.76■□□□□ 0.75
UBE2F-223ENST00000612130 MAPKBP1O60336 1514 aa19.76■□□□□ 0.75
UBE2F-223ENST00000612130 MAP3K1Q13233 1512 aa19.75■□□□□ 0.75
UBE2F-223ENST00000612130 HMGXB3Q12766 1538 aa19.72■□□□□ 0.75
UBE2F-223ENST00000612130 RAB3GAP2Q9H2M9 1393 aa19.71■□□□□ 0.75
UBE2F-223ENST00000612130 TIAM1Q13009 1591 aa19.69■□□□□ 0.74
UBE2F-223ENST00000612130 ANP32EQ9BTT0 268 aa19.67■□□□□ 0.74
UBE2F-223ENST00000612130 SETD5Q9C0A6 1442 aa19.63■□□□□ 0.73
UBE2F-223ENST00000612130 NCAPD3P42695 1498 aa19.63■□□□□ 0.73
UBE2F-223ENST00000612130 CFTRP13569 1480 aa19.59■□□□□ 0.73
UBE2F-223ENST00000612130 WDR97A6NE52 1622 aa19.58■□□□□ 0.72
UBE2F-223ENST00000612130 LRRC9Q6ZRR7 1453 aa19.58■□□□□ 0.72
UBE2F-223ENST00000612130 TIMELESSQ9UNS1 1208 aa19.58■□□□□ 0.72
UBE2F-223ENST00000612130 KCNH8Q96L42 1107 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms