RNA–Protein interactions for RNA: ENST00000350773.8

TSC2-202, Transcript of TSC complex subunit 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TSC2, Length 5,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-202ENST00000350773 DCAF8L2P0C7V8 631 aa27.2■■□□□ 1.94
TSC2-202ENST00000350773 NISCHQ9Y2I1 1504 aa26.7■■□□□ 1.86
TSC2-202ENST00000350773 SUPT5HO00267 1087 aaKnown RBP26.34■■□□□ 1.81
TSC2-202ENST00000350773 SHROOM4Q9ULL8 1493 aa25.84■■□□□ 1.73
TSC2-202ENST00000350773 PELP1Q8IZL8 1130 aaKnown RBP25.32■■□□□ 1.64
TSC2-202ENST00000350773 EHMT2Q96KQ7 1210 aa25.27■■□□□ 1.64
TSC2-202ENST00000350773 APLP2Q06481 763 aa24.97■■□□□ 1.59
TSC2-202ENST00000350773 PCGF6Q9BYE7 350 aa24.96■■□□□ 1.59
TSC2-202ENST00000350773 FAM9AQ8IZU1 332 aaPredicted RBP24.78■■□□□ 1.56
TSC2-202ENST00000350773 ZEB1P37275 1124 aaPredicted RBP24.74■■□□□ 1.55
TSC2-202ENST00000350773 CENPBP07199 599 aaPredicted RBP24.6■■□□□ 1.53
TSC2-202ENST00000350773 TTBK1Q5TCY1 1321 aaPredicted RBP24.52■■□□□ 1.52
TSC2-202ENST00000350773 TRIM41Q8WV44 630 aa24.46■■□□□ 1.51
TSC2-202ENST00000350773 CCER1Q8TC90 406 aaPredicted RBP24.42■■□□□ 1.5
TSC2-202ENST00000350773 ERICH6Q7L0X2 663 aa24.18■■□□□ 1.46
TSC2-202ENST00000350773 RANGAP1P46060 587 aaPredicted RBP24.11■■□□□ 1.45
TSC2-202ENST00000350773 MYT1Q01538 1121 aa24.07■■□□□ 1.44
TSC2-202ENST00000350773 UBTFP17480 764 aaKnown RBP24.06■■□□□ 1.44
TSC2-202ENST00000350773 TRIM26Q12899 539 aaPredicted RBP24.02■■□□□ 1.44
TSC2-202ENST00000350773 HRCP23327 699 aa23.98■■□□□ 1.43
TSC2-202ENST00000350773 NEFLP07196 543 aa23.9■■□□□ 1.42
TSC2-202ENST00000350773 YTHDC1Q96MU7 727 aaKnown RBP23.9■■□□□ 1.42
TSC2-202ENST00000350773 ATP1B4Q9UN42 357 aaPredicted RBP23.86■■□□□ 1.41
TSC2-202ENST00000350773 PPARGC1BQ86YN6 1023 aaKnown RBP23.74■■□□□ 1.39
TSC2-202ENST00000350773 CHIC1Q5VXU3 224 aa23.67■■□□□ 1.38
TSC2-202ENST00000350773 LOC105371045A0A1W2PR82 267 aa23.55■■□□□ 1.36
TSC2-202ENST00000350773 HNRNPUL2Q1KMD3 747 aaKnown RBP23.27■■□□□ 1.32
TSC2-202ENST00000350773 ITGAEP38570 1179 aa23.26■■□□□ 1.31
TSC2-202ENST00000350773 DIEXFQ68CQ4 756 aaKnown RBP23.18■■□□□ 1.3
TSC2-202ENST00000350773 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.14■■□□□ 1.3
TSC2-202ENST00000350773 DAXXQ9UER7 740 aaPredicted RBP23.09■■□□□ 1.29
TSC2-202ENST00000350773 POLR3GLQ9BT43 218 aa23.02■■□□□ 1.28
TSC2-202ENST00000350773 GTF3C3Q9Y5Q9 886 aa22.79■■□□□ 1.24
TSC2-202ENST00000350773 CNGB1Q14028 1251 aaPredicted RBP22.76■■□□□ 1.23
TSC2-202ENST00000350773 MYT1LQ9UL68 1186 aa22.74■■□□□ 1.23
TSC2-202ENST00000350773 RTL5Q5HYW3 569 aaPredicted RBP22.74■■□□□ 1.23
TSC2-202ENST00000350773 FAM50AQ14320 339 aaKnown RBP22.73■■□□□ 1.23
TSC2-202ENST00000350773 ZNF316A6NFI3 1004 aaPredicted RBP22.66■■□□□ 1.22
TSC2-202ENST00000350773 NEUROD1Q13562 356 aa22.6■■□□□ 1.21
TSC2-202ENST00000350773 ANP32CO43423 234 aa22.58■■□□□ 1.2
TSC2-202ENST00000350773 ACIN1Q9UKV3 1341 aaKnown RBP22.56■■□□□ 1.2
TSC2-202ENST00000350773 TRIM52Q96A61 297 aa22.56■■□□□ 1.2
TSC2-202ENST00000350773 BCANQ96GW7 911 aa22.54■■□□□ 1.2
TSC2-202ENST00000350773 CLSPNQ9HAW4 1339 aa22.52■■□□□ 1.2
TSC2-202ENST00000350773 CDK11AQ9UQ88 783 aaPredicted RBP22.48■■□□□ 1.19
TSC2-202ENST00000350773 ABCC9O60706 1549 aa22.48■■□□□ 1.19
TSC2-202ENST00000350773 SLC4A1APQ9BWU0 796 aaKnown RBP22.44■■□□□ 1.18
TSC2-202ENST00000350773 DCAF1Q9Y4B6 1507 aa22.43■■□□□ 1.18
TSC2-202ENST00000350773 PABPN1Q86U42 306 aaKnown RBP eCLIP22.4■■□□□ 1.188e-7■■■□□ 18.8
TSC2-202ENST00000350773 CSRNP3Q8WYN3 585 aa22.36■■□□□ 1.17
TSC2-202ENST00000350773 ZNF326Q5BKZ1 582 aaKnown RBP22.25■■□□□ 1.15
TSC2-202ENST00000350773 ZCCHC6Q5VYS8 1495 aaKnown RBP22.19■■□□□ 1.14
TSC2-202ENST00000350773 ANP32AP39687 249 aaKnown RBP22.1■■□□□ 1.13
TSC2-202ENST00000350773 P3H3Q8IVL6 736 aa22.05■■□□□ 1.12
TSC2-202ENST00000350773 FKBP8Q14318 412 aa22.02■■□□□ 1.12
TSC2-202ENST00000350773 ZBTB47Q9UFB7 747 aaPredicted RBP22.02■■□□□ 1.12
TSC2-202ENST00000350773 SCRIBQ14160 1630 aa22.02■■□□□ 1.12
TSC2-202ENST00000350773 CANXP27824 592 aaKnown RBP22.02■■□□□ 1.11
TSC2-202ENST00000350773 TONSLQ96HA7 1378 aa21.98■■□□□ 1.11
TSC2-202ENST00000350773 FBLN2P98095 1184 aa21.88■■□□□ 1.09
TSC2-202ENST00000350773 HNRNPUQ00839 825 aaKnown RBP eCLIP21.87■■□□□ 1.09
TSC2-202ENST00000350773 DDX10Q13206 875 aaKnown RBP21.87■■□□□ 1.09
TSC2-202ENST00000350773 SCAF1Q9H7N4 1312 aaKnown RBP21.86■■□□□ 1.09
TSC2-202ENST00000350773 NPM2Q86SE8 214 aaKnown RBP21.85■■□□□ 1.09
TSC2-202ENST00000350773 ARID3CA6NKF2 412 aa21.84■■□□□ 1.09
TSC2-202ENST00000350773 NEFMP07197 916 aa21.83■■□□□ 1.08
TSC2-202ENST00000350773 CCDC180Q9P1Z9 1646 aa21.8■■□□□ 1.08
TSC2-202ENST00000350773 ZNF777Q9ULD5 760 aaPredicted RBP21.8■■□□□ 1.08
TSC2-202ENST00000350773 MYO15BQ96JP2 1530 aa21.78■■□□□ 1.08
TSC2-202ENST00000350773 FAM9BQ8IZU0 186 aa21.75■■□□□ 1.07
TSC2-202ENST00000350773 MIER1Q8N108 512 aa21.74■■□□□ 1.07
TSC2-202ENST00000350773 CLIP1P30622 1438 aa21.67■■□□□ 1.06
TSC2-202ENST00000350773 BCL11AQ9H165 835 aa21.65■■□□□ 1.06
TSC2-202ENST00000350773 CCDC136Q96JN2 1154 aa21.64■■□□□ 1.06
TSC2-202ENST00000350773 UPF2Q9HAU5 1272 aaKnown RBP21.62■■□□□ 1.05
TSC2-202ENST00000350773 EEA1Q15075 1411 aa21.61■■□□□ 1.05
TSC2-202ENST00000350773 TMC1Q8TDI8 760 aa21.6■■□□□ 1.05
TSC2-202ENST00000350773 SLC24A1O60721 1099 aa21.58■■□□□ 1.05
TSC2-202ENST00000350773 ANP32BQ92688 251 aaKnown RBP21.58■■□□□ 1.05
TSC2-202ENST00000350773 MRS2Q9HD23 443 aa21.58■■□□□ 1.05
TSC2-202ENST00000350773 GOLGA3Q08378 1498 aa21.57■■□□□ 1.04
TSC2-202ENST00000350773 CEP162Q5TB80 1403 aa21.57■■□□□ 1.04
TSC2-202ENST00000350773 CHIC2Q9UKJ5 165 aa21.55■■□□□ 1.04
TSC2-202ENST00000350773 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.55■■□□□ 1.04
TSC2-202ENST00000350773 HSP90AA1P07900 732 aaKnown RBP21.52■■□□□ 1.04
TSC2-202ENST00000350773 MTUS2Q5JR59 1369 aa21.52■■□□□ 1.04
TSC2-202ENST00000350773 EIF5BO60841 1220 aaKnown RBP21.51■■□□□ 1.03
TSC2-202ENST00000350773 RSF1Q96T23 1441 aaPredicted RBP21.51■■□□□ 1.03
TSC2-202ENST00000350773 SALL2Q9Y467 1007 aaPredicted RBP21.5■■□□□ 1.03
TSC2-202ENST00000350773 NBR1Q14596 966 aa21.5■■□□□ 1.03
TSC2-202ENST00000350773 EIF4G2P78344 907 aaKnown RBP eCLIP21.46■■□□□ 1.03
TSC2-202ENST00000350773 WDR43Q15061 677 aaKnown RBP eCLIP21.45■■□□□ 1.02
TSC2-202ENST00000350773 IRX6P78412 446 aaPredicted RBP21.43■■□□□ 1.02
TSC2-202ENST00000350773 HIRIP3Q9BW71 556 aaPredicted RBP21.41■■□□□ 1.02
TSC2-202ENST00000350773 TNIKQ9UKE5 1360 aa21.41■■□□□ 1.02
TSC2-202ENST00000350773 CHGAP10645 457 aaKnown RBP21.4■■□□□ 1.02
TSC2-202ENST00000350773 TSPY4P0CV99 314 aa21.37■■□□□ 1.01
TSC2-202ENST00000350773 TSPY10P0CW01 314 aa21.37■■□□□ 1.01
TSC2-202ENST00000350773 KDM2AQ9Y2K7 1162 aa21.34■■□□□ 1.01
TSC2-202ENST00000350773 GLIPR1L2Q4G1C9 344 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms