RNA–Protein interactions for RNA: ENST00000434655.5

UBE2F-211, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 5

Gene UBE2F, Length 648 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-211ENST00000434655 NISCHQ9Y2I1 1504 aa22.68■■□□□ 1.22
UBE2F-211ENST00000434655 CCDC180Q9P1Z9 1646 aa20.27■□□□□ 0.84
UBE2F-211ENST00000434655 ABCC9O60706 1549 aa19.94■□□□□ 0.78
UBE2F-211ENST00000434655 RB1CC1Q8TDY2 1594 aa19.15■□□□□ 0.66
UBE2F-211ENST00000434655 NACADO15069 1562 aa19.09■□□□□ 0.65
UBE2F-211ENST00000434655 MYO15BQ96JP2 1530 aa18.95■□□□□ 0.62
UBE2F-211ENST00000434655 DCAF8L2P0C7V8 631 aa18.89■□□□□ 0.61
UBE2F-211ENST00000434655 ZCCHC6Q5VYS8 1495 aaKnown RBP18.89■□□□□ 0.61
UBE2F-211ENST00000434655 DNAJC5BQ9UF47 199 aa18.84■□□□□ 0.61
UBE2F-211ENST00000434655 DCAF1Q9Y4B6 1507 aa18.79■□□□□ 0.6
UBE2F-211ENST00000434655 UNC13AQ9UPW8 1703 aa18.68■□□□□ 0.58
UBE2F-211ENST00000434655 BICRAQ9NZM4 1560 aa18.57■□□□□ 0.56
UBE2F-211ENST00000434655 PABPN1Q86U42 306 aaKnown RBP eCLIP18.57■□□□□ 0.56
UBE2F-211ENST00000434655 SCRIBQ14160 1630 aa18.44■□□□□ 0.54
UBE2F-211ENST00000434655 SHROOM4Q9ULL8 1493 aa18.43■□□□□ 0.54
UBE2F-211ENST00000434655 EIF4G1Q04637 1599 aaKnown RBP18.1■□□□□ 0.49
UBE2F-211ENST00000434655 CC2D2AQ9P2K1 1620 aa18.05■□□□□ 0.48
UBE2F-211ENST00000434655 CECR2Q9BXF3 1484 aa17.96■□□□□ 0.47
UBE2F-211ENST00000434655 SMARCA4P51532 1647 aa17.65■□□□□ 0.42
UBE2F-211ENST00000434655 NCAPD3P42695 1498 aa17.61■□□□□ 0.41
UBE2F-211ENST00000434655 BAZ1AQ9NRL2 1556 aaPredicted RBP17.6■□□□□ 0.41
UBE2F-211ENST00000434655 ATAD2BQ9ULI0 1458 aa17.58■□□□□ 0.41
UBE2F-211ENST00000434655 SMARCA2P51531 1590 aa17.57■□□□□ 0.4
UBE2F-211ENST00000434655 HMGXB3Q12766 1538 aa17.53■□□□□ 0.4
UBE2F-211ENST00000434655 PEG3Q9GZU2 1588 aa17.51■□□□□ 0.39
UBE2F-211ENST00000434655 MROH2BQ7Z745 1585 aa17.46■□□□□ 0.39
UBE2F-211ENST00000434655 BAZ1BQ9UIG0 1483 aaKnown RBP17.44■□□□□ 0.38
UBE2F-211ENST00000434655 DNAJC5Q9H3Z4 198 aa17.43■□□□□ 0.38
UBE2F-211ENST00000434655 WIZO95785 1651 aa17.25■□□□□ 0.35
UBE2F-211ENST00000434655 ERCC6Q03468 1493 aa17.21■□□□□ 0.35
UBE2F-211ENST00000434655 NESP48681 1621 aa17.21■□□□□ 0.35
UBE2F-211ENST00000434655 RSF1Q96T23 1441 aaPredicted RBP17.2■□□□□ 0.34
UBE2F-211ENST00000434655 LAMC3Q9Y6N6 1575 aa17.19■□□□□ 0.34
UBE2F-211ENST00000434655 CUX2O14529 1486 aa17.13■□□□□ 0.33
UBE2F-211ENST00000434655 TOP2AP11388 1531 aaKnown RBP17.1■□□□□ 0.33
UBE2F-211ENST00000434655 CADPSQ9ULU8 1353 aa17.07■□□□□ 0.32
UBE2F-211ENST00000434655 PDS5BQ9NTI5 1447 aa17.05■□□□□ 0.32
UBE2F-211ENST00000434655 THOC2Q8NI27 1593 aaKnown RBP17.03■□□□□ 0.32
UBE2F-211ENST00000434655 KIF21AQ7Z4S6 1674 aa17.01■□□□□ 0.31
UBE2F-211ENST00000434655 CFTRP13569 1480 aa16.95■□□□□ 0.3
UBE2F-211ENST00000434655 MRC2Q9UBG0 1479 aa16.9■□□□□ 0.3
UBE2F-211ENST00000434655 CEP164Q9UPV0 1460 aa16.88■□□□□ 0.29
UBE2F-211ENST00000434655 FANCD2Q9BXW9 1451 aa16.87■□□□□ 0.29
UBE2F-211ENST00000434655 WDR62O43379 1518 aa16.87■□□□□ 0.29
UBE2F-211ENST00000434655 CCDC88BA6NC98 1476 aa16.86■□□□□ 0.29
UBE2F-211ENST00000434655 PRDM2Q13029 1718 aa16.8■□□□□ 0.28
UBE2F-211ENST00000434655 URB2Q14146 1524 aaKnown RBP16.72■□□□□ 0.27
UBE2F-211ENST00000434655 AEBP2Q6ZN18 517 aaPredicted RBP16.63■□□□□ 0.25
UBE2F-211ENST00000434655 TOPBP1Q92547 1522 aa16.59■□□□□ 0.25
UBE2F-211ENST00000434655 ABCC8Q09428 1581 aa16.59■□□□□ 0.25
UBE2F-211ENST00000434655 DNMBPQ6XZF7 1577 aa16.57■□□□□ 0.24
UBE2F-211ENST00000434655 CHIC1Q5VXU3 224 aa16.56■□□□□ 0.24
UBE2F-211ENST00000434655 IFT140Q96RY7 1462 aa16.54■□□□□ 0.24
UBE2F-211ENST00000434655 SUPT5HO00267 1087 aaKnown RBP16.54■□□□□ 0.24
UBE2F-211ENST00000434655 TRIM41Q8WV44 630 aa16.54■□□□□ 0.24
UBE2F-211ENST00000434655 ZNF608Q9ULD9 1512 aaPredicted RBP16.46■□□□□ 0.23
UBE2F-211ENST00000434655 POLA1P09884 1462 aaPredicted RBP16.44■□□□□ 0.22
UBE2F-211ENST00000434655 TARBP1Q13395 1621 aaKnown RBP16.44■□□□□ 0.22
UBE2F-211ENST00000434655 EIF4G3O43432 1585 aaKnown RBP16.42■□□□□ 0.22
UBE2F-211ENST00000434655 CUX1P39880 1505 aa16.4■□□□□ 0.22
UBE2F-211ENST00000434655 FGD5Q6ZNL6 1462 aa16.37■□□□□ 0.21
UBE2F-211ENST00000434655 SOGA1O94964 1423 aa16.35■□□□□ 0.21
UBE2F-211ENST00000434655 RAD54L2Q9Y4B4 1467 aa16.35■□□□□ 0.21
UBE2F-211ENST00000434655 WDR97A6NE52 1622 aa16.34■□□□□ 0.21
UBE2F-211ENST00000434655 AQRO60306 1485 aaKnown RBP eCLIP16.33■□□□□ 0.23e-6■■■□□ 18.3
UBE2F-211ENST00000434655 OSCARQ8IYS5 282 aa16.32■□□□□ 0.2
UBE2F-211ENST00000434655 TDRD9Q8NDG6 1382 aaKnown RBP16.26■□□□□ 0.19
UBE2F-211ENST00000434655 TOP2BQ02880 1626 aa16.23■□□□□ 0.19
UBE2F-211ENST00000434655 BIVM-ERCC5R4GMW8 1640 aa16.23■□□□□ 0.19
UBE2F-211ENST00000434655 WRNQ14191 1432 aaPredicted RBP eCLIP16.22■□□□□ 0.19
UBE2F-211ENST00000434655 ABCA10Q8WWZ4 1543 aa16.22■□□□□ 0.19
UBE2F-211ENST00000434655 CHD1O14646 1710 aa16.21■□□□□ 0.19
UBE2F-211ENST00000434655 SNAPC4Q5SXM2 1469 aa16.21■□□□□ 0.19
UBE2F-211ENST00000434655 SYNJ1O43426 1573 aa16.21■□□□□ 0.18
UBE2F-211ENST00000434655 GRIN2BQ13224 1484 aa16.2■□□□□ 0.18
UBE2F-211ENST00000434655 MAGI1Q96QZ7 1491 aaPredicted RBP16.2■□□□□ 0.18
UBE2F-211ENST00000434655 ABCA5Q8WWZ7 1642 aa16.19■□□□□ 0.18
UBE2F-211ENST00000434655 GAPVD1Q14C86 1478 aa16.16■□□□□ 0.18
UBE2F-211ENST00000434655 PBRM1Q86U86 1689 aa16.15■□□□□ 0.18
UBE2F-211ENST00000434655 SYNJ2O15056 1496 aa16.13■□□□□ 0.17
UBE2F-211ENST00000434655 RIMBP3CA6NJZ7 1639 aa16.12■□□□□ 0.17
UBE2F-211ENST00000434655 RIMBP3BA6NNM3 1639 aa16.12■□□□□ 0.17
UBE2F-211ENST00000434655 RIMBP3Q9UFD9 1639 aa16.12■□□□□ 0.17
UBE2F-211ENST00000434655 FBLN2P98095 1184 aa16.12■□□□□ 0.17
UBE2F-211ENST00000434655 ARHGEF11O15085 1522 aa16.11■□□□□ 0.17
UBE2F-211ENST00000434655 CLASP1Q7Z460 1538 aa16.08■□□□□ 0.16
UBE2F-211ENST00000434655 CHMP7Q8WUX9 453 aaPredicted RBP16.07■□□□□ 0.16
UBE2F-211ENST00000434655 ADAMTS12P58397 1594 aa16.04■□□□□ 0.16
UBE2F-211ENST00000434655 ERICH3Q5RHP9 1530 aa16.03■□□□□ 0.16
UBE2F-211ENST00000434655 GRIN2AQ12879 1464 aa16■□□□□ 0.15
UBE2F-211ENST00000434655 FHAD1B1AJZ9 1412 aa15.99■□□□□ 0.15
UBE2F-211ENST00000434655 ARAP1Q96P48 1450 aa15.97■□□□□ 0.15
UBE2F-211ENST00000434655 NUP160Q12769 1436 aa15.94■□□□□ 0.14
UBE2F-211ENST00000434655 CYB5RLQ6IPT4 315 aa15.94■□□□□ 0.14
UBE2F-211ENST00000434655 CEP170Q5SW79 1584 aa15.92■□□□□ 0.14
UBE2F-211ENST00000434655 KIF27Q86VH2 1401 aa15.9■□□□□ 0.14
UBE2F-211ENST00000434655 SHROOM2Q13796 1616 aa15.85■□□□□ 0.13
UBE2F-211ENST00000434655 CUL7Q14999 1698 aa15.85■□□□□ 0.13
UBE2F-211ENST00000434655 IGF1RP08069 1367 aa15.84■□□□□ 0.13
UBE2F-211ENST00000434655 RUSC2Q8N2Y8 1516 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms