RNA–Protein interactions for RNA: ENST00000441728.6

UBE2F-215, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 2

Gene UBE2F, Length 1,242 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-215ENST00000441728 NISCHQ9Y2I1 1504 aa49.93■■■■■ 5.58
UBE2F-215ENST00000441728 ABCC9O60706 1549 aa45.16■■■■■ 4.82
UBE2F-215ENST00000441728 CCDC180Q9P1Z9 1646 aa44.92■■■■■ 4.78
UBE2F-215ENST00000441728 RB1CC1Q8TDY2 1594 aa42.92■■■■■ 4.46
UBE2F-215ENST00000441728 NACADO15069 1562 aa42.54■■■■■ 4.4
UBE2F-215ENST00000441728 DCAF8L2P0C7V8 631 aa42.47■■■■■ 4.39
UBE2F-215ENST00000441728 DNAJC5BQ9UF47 199 aa42.38■■■■■ 4.37
UBE2F-215ENST00000441728 PABPN1Q86U42 306 aaKnown RBP eCLIP42.02■■■■■ 4.32
UBE2F-215ENST00000441728 UNC13AQ9UPW8 1703 aa41.81■■■■■ 4.28
UBE2F-215ENST00000441728 MYO15BQ96JP2 1530 aa41.8■■■■■ 4.28
UBE2F-215ENST00000441728 BICRAQ9NZM4 1560 aa41.5■■■■■ 4.23
UBE2F-215ENST00000441728 ZCCHC6Q5VYS8 1495 aaKnown RBP41.32■■■■■ 4.2
UBE2F-215ENST00000441728 DCAF1Q9Y4B6 1507 aa41.2■■■■■ 4.19
UBE2F-215ENST00000441728 SHROOM4Q9ULL8 1493 aa41.05■■■■■ 4.16
UBE2F-215ENST00000441728 SCRIBQ14160 1630 aa40.96■■■■■ 4.15
UBE2F-215ENST00000441728 CC2D2AQ9P2K1 1620 aa40.75■■■■■ 4.11
UBE2F-215ENST00000441728 CECR2Q9BXF3 1484 aa40.7■■■■■ 4.11
UBE2F-215ENST00000441728 EIF4G1Q04637 1599 aaKnown RBP40.61■■■■■ 4.09
UBE2F-215ENST00000441728 NCAPD3P42695 1498 aa39.22■■■■□ 3.87
UBE2F-215ENST00000441728 DNAJC5Q9H3Z4 198 aa39.17■■■■□ 3.86
UBE2F-215ENST00000441728 ERCC6Q03468 1493 aa39.11■■■■□ 3.85
UBE2F-215ENST00000441728 ATAD2BQ9ULI0 1458 aa39.09■■■■□ 3.85
UBE2F-215ENST00000441728 SMARCA2P51531 1590 aa39.04■■■■□ 3.84
UBE2F-215ENST00000441728 SMARCA4P51532 1647 aa39.01■■■■□ 3.84
UBE2F-215ENST00000441728 CUX2O14529 1486 aa39.01■■■■□ 3.84
UBE2F-215ENST00000441728 HMGXB3Q12766 1538 aa38.94■■■■□ 3.82
UBE2F-215ENST00000441728 BAZ1AQ9NRL2 1556 aaPredicted RBP38.84■■■■□ 3.81
UBE2F-215ENST00000441728 BAZ1BQ9UIG0 1483 aaKnown RBP38.79■■■■□ 3.8
UBE2F-215ENST00000441728 NESP48681 1621 aa38.67■■■■□ 3.78
UBE2F-215ENST00000441728 PEG3Q9GZU2 1588 aa38.57■■■■□ 3.76
UBE2F-215ENST00000441728 MROH2BQ7Z745 1585 aa38.45■■■■□ 3.75
UBE2F-215ENST00000441728 LAMC3Q9Y6N6 1575 aa38.44■■■■□ 3.74
UBE2F-215ENST00000441728 THOC2Q8NI27 1593 aaKnown RBP38.31■■■■□ 3.72
UBE2F-215ENST00000441728 PDS5BQ9NTI5 1447 aa38.28■■■■□ 3.72
UBE2F-215ENST00000441728 KIF21AQ7Z4S6 1674 aa38.19■■■■□ 3.7
UBE2F-215ENST00000441728 CADPSQ9ULU8 1353 aa38.06■■■■□ 3.68
UBE2F-215ENST00000441728 WIZO95785 1651 aa38.01■■■■□ 3.67
UBE2F-215ENST00000441728 MRC2Q9UBG0 1479 aa37.91■■■■□ 3.66
UBE2F-215ENST00000441728 WDR62O43379 1518 aa37.77■■■■□ 3.64
UBE2F-215ENST00000441728 CEP164Q9UPV0 1460 aa37.76■■■■□ 3.63
UBE2F-215ENST00000441728 FANCD2Q9BXW9 1451 aa37.66■■■■□ 3.62
UBE2F-215ENST00000441728 RSF1Q96T23 1441 aaPredicted RBP37.59■■■■□ 3.61
UBE2F-215ENST00000441728 CFTRP13569 1480 aa37.55■■■■□ 3.6
UBE2F-215ENST00000441728 TRIM41Q8WV44 630 aa37.54■■■■□ 3.6
UBE2F-215ENST00000441728 TOP2AP11388 1531 aaKnown RBP37.54■■■■□ 3.6
UBE2F-215ENST00000441728 URB2Q14146 1524 aaKnown RBP37.29■■■■□ 3.56
UBE2F-215ENST00000441728 OSCARQ8IYS5 282 aa37.25■■■■□ 3.55
UBE2F-215ENST00000441728 PRDM2Q13029 1718 aa37.19■■■■□ 3.54
UBE2F-215ENST00000441728 CCDC88BA6NC98 1476 aa37.09■■■■□ 3.53
UBE2F-215ENST00000441728 IFT140Q96RY7 1462 aa36.99■■■■□ 3.51
UBE2F-215ENST00000441728 TOPBP1Q92547 1522 aa36.9■■■■□ 3.5
UBE2F-215ENST00000441728 ABCC8Q09428 1581 aa36.88■■■■□ 3.49
UBE2F-215ENST00000441728 ZNF608Q9ULD9 1512 aaPredicted RBP36.87■■■■□ 3.49
UBE2F-215ENST00000441728 DNMBPQ6XZF7 1577 aa36.76■■■■□ 3.48
UBE2F-215ENST00000441728 RIMBP3CA6NJZ7 1639 aa36.7■■■■□ 3.47
UBE2F-215ENST00000441728 RIMBP3BA6NNM3 1639 aa36.7■■■■□ 3.47
UBE2F-215ENST00000441728 RIMBP3Q9UFD9 1639 aa36.7■■■■□ 3.47
UBE2F-215ENST00000441728 EIF4G3O43432 1585 aaKnown RBP36.7■■■■□ 3.47
UBE2F-215ENST00000441728 ARHGEF11O15085 1522 aa36.58■■■■□ 3.45
UBE2F-215ENST00000441728 AQRO60306 1485 aaKnown RBP eCLIP36.55■■■■□ 3.443e-6■■■□□ 18.3
UBE2F-215ENST00000441728 FBLN2P98095 1184 aa36.53■■■■□ 3.44
UBE2F-215ENST00000441728 TARBP1Q13395 1621 aaKnown RBP36.52■■■■□ 3.44
UBE2F-215ENST00000441728 POLA1P09884 1462 aaPredicted RBP36.5■■■■□ 3.43
UBE2F-215ENST00000441728 CHD1O14646 1710 aa36.47■■■■□ 3.43
UBE2F-215ENST00000441728 CYB5RLQ6IPT4 315 aa36.4■■■■□ 3.42
UBE2F-215ENST00000441728 SOGA1O94964 1423 aa36.39■■■■□ 3.42
UBE2F-215ENST00000441728 RAD54L2Q9Y4B4 1467 aa36.37■■■■□ 3.41
UBE2F-215ENST00000441728 TDRD9Q8NDG6 1382 aaKnown RBP36.32■■■■□ 3.4
UBE2F-215ENST00000441728 FGD5Q6ZNL6 1462 aa36.27■■■■□ 3.4
UBE2F-215ENST00000441728 WDR97A6NE52 1622 aa36.23■■■■□ 3.39
UBE2F-215ENST00000441728 SNAPC4Q5SXM2 1469 aa36.2■■■■□ 3.39
UBE2F-215ENST00000441728 CHMP7Q8WUX9 453 aaPredicted RBP36.19■■■■□ 3.38
UBE2F-215ENST00000441728 TRHP20396 242 aaPredicted RBP36.18■■■■□ 3.38
UBE2F-215ENST00000441728 ARAP1Q96P48 1450 aa36.18■■■■□ 3.38
UBE2F-215ENST00000441728 CUX1P39880 1505 aa36.15■■■■□ 3.38
UBE2F-215ENST00000441728 MAGI1Q96QZ7 1491 aaPredicted RBP36.11■■■■□ 3.37
UBE2F-215ENST00000441728 GRIN2BQ13224 1484 aa36.1■■■■□ 3.37
UBE2F-215ENST00000441728 SYNJ1O43426 1573 aa36.08■■■■□ 3.37
UBE2F-215ENST00000441728 CLASP1Q7Z460 1538 aa35.99■■■■□ 3.35
UBE2F-215ENST00000441728 SYNJ2O15056 1496 aa35.98■■■■□ 3.35
UBE2F-215ENST00000441728 SUPT5HO00267 1087 aaKnown RBP35.97■■■■□ 3.35
UBE2F-215ENST00000441728 GAPVD1Q14C86 1478 aa35.93■■■■□ 3.34
UBE2F-215ENST00000441728 PBRM1Q86U86 1689 aa35.91■■■■□ 3.34
UBE2F-215ENST00000441728 ABCA10Q8WWZ4 1543 aa35.82■■■■□ 3.32
UBE2F-215ENST00000441728 ABCA5Q8WWZ7 1642 aa35.76■■■■□ 3.32
UBE2F-215ENST00000441728 WRNQ14191 1432 aaPredicted RBP eCLIP35.71■■■■□ 3.31
UBE2F-215ENST00000441728 GRIN2AQ12879 1464 aa35.6■■■■□ 3.29
UBE2F-215ENST00000441728 TOP2BQ02880 1626 aa35.54■■■■□ 3.28
UBE2F-215ENST00000441728 ADAMTS12P58397 1594 aa35.54■■■■□ 3.28
UBE2F-215ENST00000441728 BIVM-ERCC5R4GMW8 1640 aa35.54■■■■□ 3.28
UBE2F-215ENST00000441728 FHAD1B1AJZ9 1412 aa35.48■■■■□ 3.27
UBE2F-215ENST00000441728 CEP170Q5SW79 1584 aa35.44■■■■□ 3.26
UBE2F-215ENST00000441728 NUP160Q12769 1436 aa35.44■■■■□ 3.26
UBE2F-215ENST00000441728 ERCC6L2Q5T890 1561 aa35.39■■■■□ 3.26
UBE2F-215ENST00000441728 ERICH3Q5RHP9 1530 aa35.39■■■■□ 3.26
UBE2F-215ENST00000441728 AEBP2Q6ZN18 517 aaPredicted RBP35.34■■■■□ 3.25
UBE2F-215ENST00000441728 SHROOM2Q13796 1616 aa35.28■■■■□ 3.24
UBE2F-215ENST00000441728 PRG4Q92954 1404 aaPredicted RBP35.2■■■■□ 3.23
UBE2F-215ENST00000441728 JPH4Q96JJ6 628 aa35.16■■■■□ 3.22
UBE2F-215ENST00000441728 NPM1P06748 294 aaKnown RBP eCLIP35.05■■■■□ 3.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms