RNA–Protein interactions for RNA: ENST00000414443.5

UBE2F-205, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 2 BASIC

Gene UBE2F, Length 2,100 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-205ENST00000414443 NISCHQ9Y2I1 1504 aa43.3■■■■■ 4.52
UBE2F-205ENST00000414443 CCDC180Q9P1Z9 1646 aa37.41■■■■□ 3.58
UBE2F-205ENST00000414443 ZCCHC6Q5VYS8 1495 aaKnown RBP36.47■■■■□ 3.43
UBE2F-205ENST00000414443 SHROOM4Q9ULL8 1493 aa35.89■■■■□ 3.34
UBE2F-205ENST00000414443 DCAF8L2P0C7V8 631 aa35.74■■■■□ 3.31
UBE2F-205ENST00000414443 DCAF1Q9Y4B6 1507 aa35.7■■■■□ 3.31
UBE2F-205ENST00000414443 ABCC9O60706 1549 aa35.05■■■■□ 3.2
UBE2F-205ENST00000414443 MYO15BQ96JP2 1530 aa35.04■■■■□ 3.2
UBE2F-205ENST00000414443 SUPT5HO00267 1087 aaKnown RBP34.78■■■■□ 3.16
UBE2F-205ENST00000414443 NACADO15069 1562 aa34.72■■■■□ 3.15
UBE2F-205ENST00000414443 SCRIBQ14160 1630 aa34.63■■■■□ 3.13
UBE2F-205ENST00000414443 RB1CC1Q8TDY2 1594 aa34.31■■■■□ 3.08
UBE2F-205ENST00000414443 RSF1Q96T23 1441 aaPredicted RBP33.84■■■■□ 3.01
UBE2F-205ENST00000414443 UNC13AQ9UPW8 1703 aa33.79■■■■□ 3
UBE2F-205ENST00000414443 CECR2Q9BXF3 1484 aa33.7■■■□□ 2.98
UBE2F-205ENST00000414443 CHIC1Q5VXU3 224 aa33.54■■■□□ 2.96
UBE2F-205ENST00000414443 MROH2BQ7Z745 1585 aa33.54■■■□□ 2.96
UBE2F-205ENST00000414443 BICRAQ9NZM4 1560 aa33.37■■■□□ 2.93
UBE2F-205ENST00000414443 BAZ1AQ9NRL2 1556 aaPredicted RBP33.35■■■□□ 2.93
UBE2F-205ENST00000414443 WIZO95785 1651 aa33.32■■■□□ 2.92
UBE2F-205ENST00000414443 PABPN1Q86U42 306 aaKnown RBP eCLIP33.23■■■□□ 2.91
UBE2F-205ENST00000414443 SMARCA4P51532 1647 aa33.17■■■□□ 2.9
UBE2F-205ENST00000414443 TOP2AP11388 1531 aaKnown RBP32.87■■■□□ 2.85
UBE2F-205ENST00000414443 PEG3Q9GZU2 1588 aa32.69■■■□□ 2.82
UBE2F-205ENST00000414443 SMARCA2P51531 1590 aa32.64■■■□□ 2.81
UBE2F-205ENST00000414443 CCDC88BA6NC98 1476 aa32.62■■■□□ 2.81
UBE2F-205ENST00000414443 EIF4G1Q04637 1599 aaKnown RBP32.59■■■□□ 2.81
UBE2F-205ENST00000414443 TRIM41Q8WV44 630 aa32.59■■■□□ 2.81
UBE2F-205ENST00000414443 ATAD2BQ9ULI0 1458 aa32.5■■■□□ 2.79
UBE2F-205ENST00000414443 LOC105371045A0A1W2PR82 267 aa32.38■■■□□ 2.77
UBE2F-205ENST00000414443 BAZ1BQ9UIG0 1483 aaKnown RBP32.33■■■□□ 2.77
UBE2F-205ENST00000414443 ABCC8Q09428 1581 aa32.17■■■□□ 2.74
UBE2F-205ENST00000414443 FAM9AQ8IZU1 332 aaPredicted RBP32.11■■■□□ 2.73
UBE2F-205ENST00000414443 NCAPD3P42695 1498 aa32.08■■■□□ 2.73
UBE2F-205ENST00000414443 HMGXB3Q12766 1538 aa32.05■■■□□ 2.72
UBE2F-205ENST00000414443 WRNQ14191 1432 aaPredicted RBP eCLIP31.81■■■□□ 2.68
UBE2F-205ENST00000414443 EHMT2Q96KQ7 1210 aa31.72■■■□□ 2.67
UBE2F-205ENST00000414443 SYNJ1O43426 1573 aa31.71■■■□□ 2.67
UBE2F-205ENST00000414443 CC2D2AQ9P2K1 1620 aa31.7■■■□□ 2.67
UBE2F-205ENST00000414443 SOGA1O94964 1423 aa31.68■■■□□ 2.66
UBE2F-205ENST00000414443 RUSC2Q8N2Y8 1516 aa31.56■■■□□ 2.64
UBE2F-205ENST00000414443 EEA1Q15075 1411 aa31.55■■■□□ 2.64
UBE2F-205ENST00000414443 CFTRP13569 1480 aa31.54■■■□□ 2.64
UBE2F-205ENST00000414443 TOP2BQ02880 1626 aa31.48■■■□□ 2.63
UBE2F-205ENST00000414443 CSRNP3Q8WYN3 585 aa31.45■■■□□ 2.62
UBE2F-205ENST00000414443 PCGF6Q9BYE7 350 aa31.44■■■□□ 2.62
UBE2F-205ENST00000414443 BIVM-ERCC5R4GMW8 1640 aa31.42■■■□□ 2.62
UBE2F-205ENST00000414443 PRDM2Q13029 1718 aa31.4■■■□□ 2.62
UBE2F-205ENST00000414443 CADPSQ9ULU8 1353 aa31.32■■■□□ 2.6
UBE2F-205ENST00000414443 CUX1P39880 1505 aa31.3■■■□□ 2.6
UBE2F-205ENST00000414443 TNIKQ9UKE5 1360 aa31.23■■■□□ 2.59
UBE2F-205ENST00000414443 GOLGA3Q08378 1498 aa31.21■■■□□ 2.59
UBE2F-205ENST00000414443 TRIM26Q12899 539 aaPredicted RBP31.2■■■□□ 2.59
UBE2F-205ENST00000414443 KIF21BO75037 1637 aa31.17■■■□□ 2.58
UBE2F-205ENST00000414443 CEP162Q5TB80 1403 aa31.15■■■□□ 2.58
UBE2F-205ENST00000414443 CEP164Q9UPV0 1460 aa31.14■■■□□ 2.58
UBE2F-205ENST00000414443 UBTFP17480 764 aaKnown RBP31.13■■■□□ 2.57
UBE2F-205ENST00000414443 FANCD2Q9BXW9 1451 aa31■■■□□ 2.55
UBE2F-205ENST00000414443 RAPGEF2Q9Y4G8 1499 aa30.98■■■□□ 2.55
UBE2F-205ENST00000414443 NESP48681 1621 aa30.98■■■□□ 2.55
UBE2F-205ENST00000414443 KIF27Q86VH2 1401 aa30.93■■■□□ 2.54
UBE2F-205ENST00000414443 HRCP23327 699 aa30.92■■■□□ 2.54
UBE2F-205ENST00000414443 DNAJC5BQ9UF47 199 aa30.91■■■□□ 2.54
UBE2F-205ENST00000414443 PRXQ9BXM0 1461 aa30.89■■■□□ 2.53
UBE2F-205ENST00000414443 LAMC3Q9Y6N6 1575 aa30.88■■■□□ 2.53
UBE2F-205ENST00000414443 FGD5Q6ZNL6 1462 aa30.86■■■□□ 2.53
UBE2F-205ENST00000414443 PPARGC1BQ86YN6 1023 aaKnown RBP30.85■■■□□ 2.53
UBE2F-205ENST00000414443 ERICH3Q5RHP9 1530 aa30.84■■■□□ 2.53
UBE2F-205ENST00000414443 DNMBPQ6XZF7 1577 aa30.78■■■□□ 2.52
UBE2F-205ENST00000414443 CUX2O14529 1486 aa30.77■■■□□ 2.52
UBE2F-205ENST00000414443 CLIP1P30622 1438 aa30.76■■■□□ 2.51
UBE2F-205ENST00000414443 TOPBP1Q92547 1522 aa30.73■■■□□ 2.51
UBE2F-205ENST00000414443 IGF1RP08069 1367 aa30.66■■■□□ 2.5
UBE2F-205ENST00000414443 POLA1P09884 1462 aaPredicted RBP30.64■■■□□ 2.49
UBE2F-205ENST00000414443 PDS5BQ9NTI5 1447 aa30.63■■■□□ 2.49
UBE2F-205ENST00000414443 URB2Q14146 1524 aaKnown RBP30.61■■■□□ 2.49
UBE2F-205ENST00000414443 RAD54L2Q9Y4B4 1467 aa30.59■■■□□ 2.49
UBE2F-205ENST00000414443 KIF21AQ7Z4S6 1674 aa30.57■■■□□ 2.48
UBE2F-205ENST00000414443 RANGAP1P46060 587 aaPredicted RBP30.57■■■□□ 2.48
UBE2F-205ENST00000414443 ABCA10Q8WWZ4 1543 aa30.56■■■□□ 2.48
UBE2F-205ENST00000414443 VPS8Q8N3P4 1428 aa30.56■■■□□ 2.48
UBE2F-205ENST00000414443 CARMIL1Q5VZK9 1371 aa30.49■■■□□ 2.47
UBE2F-205ENST00000414443 TTBK1Q5TCY1 1321 aaPredicted RBP30.48■■■□□ 2.47
UBE2F-205ENST00000414443 WDR97A6NE52 1622 aa30.43■■■□□ 2.46
UBE2F-205ENST00000414443 ARAP1Q96P48 1450 aa30.42■■■□□ 2.46
UBE2F-205ENST00000414443 ARHGAP35Q9NRY4 1499 aa30.31■■■□□ 2.44
UBE2F-205ENST00000414443 CUL7Q14999 1698 aa30.29■■■□□ 2.44
UBE2F-205ENST00000414443 ABCA5Q8WWZ7 1642 aa30.28■■■□□ 2.44
UBE2F-205ENST00000414443 APLP2Q06481 763 aa30.25■■■□□ 2.43
UBE2F-205ENST00000414443 TDRD9Q8NDG6 1382 aaKnown RBP30.25■■■□□ 2.43
UBE2F-205ENST00000414443 TARBP1Q13395 1621 aaKnown RBP30.23■■■□□ 2.43
UBE2F-205ENST00000414443 MRC2Q9UBG0 1479 aa30.22■■■□□ 2.43
UBE2F-205ENST00000414443 GAPVD1Q14C86 1478 aa30.2■■■□□ 2.42
UBE2F-205ENST00000414443 ZEB1P37275 1124 aaPredicted RBP30.14■■■□□ 2.42
UBE2F-205ENST00000414443 CTTNBP2Q8WZ74 1663 aa30.08■■■□□ 2.41
UBE2F-205ENST00000414443 WDR62O43379 1518 aa30.04■■■□□ 2.4
UBE2F-205ENST00000414443 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.02■■■□□ 2.4
UBE2F-205ENST00000414443 KANK4Q5T7N3 995 aaPredicted RBP30.01■■■□□ 2.39
UBE2F-205ENST00000414443 PBRM1Q86U86 1689 aa30■■■□□ 2.39
UBE2F-205ENST00000414443 AQRO60306 1485 aaKnown RBP eCLIP29.97■■■□□ 2.393e-6■■■□□ 18.3
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms