RNA–Protein interactions for RNA: ENST00000409953.5

UBE2F-204, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 3 BASIC

Gene UBE2F, Length 924 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-204ENST00000409953 AEBP2Q6ZN18 517 aaPredicted RBP18.86■□□□□ 0.61
UBE2F-204ENST00000409953 NISCHQ9Y2I1 1504 aa18.79■□□□□ 0.6
UBE2F-204ENST00000409953 CHIC1Q5VXU3 224 aa18.62■□□□□ 0.57
UBE2F-204ENST00000409953 ABCC9O60706 1549 aa18.44■□□□□ 0.54
UBE2F-204ENST00000409953 DNAJC5BQ9UF47 199 aa18.25■□□□□ 0.51
UBE2F-204ENST00000409953 DNAJC5Q9H3Z4 198 aa17.54■□□□□ 0.4
UBE2F-204ENST00000409953 CCDC180Q9P1Z9 1646 aa17.32■□□□□ 0.36
UBE2F-204ENST00000409953 RB1CC1Q8TDY2 1594 aa17.03■□□□□ 0.32
UBE2F-204ENST00000409953 PABPN1Q86U42 306 aaKnown RBP eCLIP16.98■□□□□ 0.31
UBE2F-204ENST00000409953 CECR2Q9BXF3 1484 aa16.72■□□□□ 0.27
UBE2F-204ENST00000409953 NACADO15069 1562 aa16.64■□□□□ 0.25
UBE2F-204ENST00000409953 UNC13AQ9UPW8 1703 aa16.62■□□□□ 0.25
UBE2F-204ENST00000409953 BICRAQ9NZM4 1560 aa16.59■□□□□ 0.25
UBE2F-204ENST00000409953 CC2D2AQ9P2K1 1620 aa16.58■□□□□ 0.24
UBE2F-204ENST00000409953 PHF23Q9BUL5 403 aaPredicted RBP16.37■□□□□ 0.21
UBE2F-204ENST00000409953 TRIM41Q8WV44 630 aa16.36■□□□□ 0.21
UBE2F-204ENST00000409953 DCAF8L2P0C7V8 631 aa16.34■□□□□ 0.21
UBE2F-204ENST00000409953 CUX2O14529 1486 aa16.33■□□□□ 0.2
UBE2F-204ENST00000409953 EIF4G1Q04637 1599 aaKnown RBP16.27■□□□□ 0.2
UBE2F-204ENST00000409953 SHROOM4Q9ULL8 1493 aa16.24■□□□□ 0.19
UBE2F-204ENST00000409953 MYO15BQ96JP2 1530 aa16.04■□□□□ 0.16
UBE2F-204ENST00000409953 SENP3Q9H4L4 574 aaPredicted RBP16.02■□□□□ 0.16
UBE2F-204ENST00000409953 ERCC6Q03468 1493 aa16.01■□□□□ 0.15
UBE2F-204ENST00000409953 SCRIBQ14160 1630 aa15.77■□□□□ 0.12
UBE2F-204ENST00000409953 THOC2Q8NI27 1593 aaKnown RBP15.58■□□□□ 0.09
UBE2F-204ENST00000409953 NESP48681 1621 aa15.53■□□□□ 0.08
UBE2F-204ENST00000409953 DCAF1Q9Y4B6 1507 aa15.43■□□□□ 0.06
UBE2F-204ENST00000409953 SMARCA2P51531 1590 aa15.41■□□□□ 0.06
UBE2F-204ENST00000409953 BAZ1AQ9NRL2 1556 aaPredicted RBP15.39■□□□□ 0.05
UBE2F-204ENST00000409953 NCAPD3P42695 1498 aa15.38■□□□□ 0.05
UBE2F-204ENST00000409953 OSCARQ8IYS5 282 aa15.37■□□□□ 0.05
UBE2F-204ENST00000409953 ZCCHC6Q5VYS8 1495 aaKnown RBP15.35■□□□□ 0.05
UBE2F-204ENST00000409953 RIMBP3CA6NJZ7 1639 aa15.32■□□□□ 0.04
UBE2F-204ENST00000409953 RIMBP3BA6NNM3 1639 aa15.32■□□□□ 0.04
UBE2F-204ENST00000409953 RIMBP3Q9UFD9 1639 aa15.32■□□□□ 0.04
UBE2F-204ENST00000409953 TRHP20396 242 aaPredicted RBP15.31■□□□□ 0.04
UBE2F-204ENST00000409953 KIF21AQ7Z4S6 1674 aa15.27■□□□□ 0.03
UBE2F-204ENST00000409953 ILDR1Q86SU0 546 aaPredicted RBP15.22■□□□□ 0.03
UBE2F-204ENST00000409953 LAMC3Q9Y6N6 1575 aa15.2■□□□□ 0.02
UBE2F-204ENST00000409953 ATAD2BQ9ULI0 1458 aa15.19■□□□□ 0.02
UBE2F-204ENST00000409953 PLPPR3Q6T4P5 718 aa15.18■□□□□ 0.02
UBE2F-204ENST00000409953 HMGXB3Q12766 1538 aa15.17■□□□□ 0.02
UBE2F-204ENST00000409953 ARHGEF11O15085 1522 aa15.17■□□□□ 0.02
UBE2F-204ENST00000409953 PDS5BQ9NTI5 1447 aa15.17■□□□□ 0.02
UBE2F-204ENST00000409953 MRC2Q9UBG0 1479 aa15.12■□□□□ 0.01
UBE2F-204ENST00000409953 WDR62O43379 1518 aa15.12■□□□□ 0.01
UBE2F-204ENST00000409953 CYB5RLQ6IPT4 315 aa15.1■□□□□ 0.01
UBE2F-204ENST00000409953 BAZ1BQ9UIG0 1483 aaKnown RBP15□□□□□ -0.01
UBE2F-204ENST00000409953 ARAP1Q96P48 1450 aa14.95□□□□□ -0.02
UBE2F-204ENST00000409953 SMARCA4P51532 1647 aa14.9□□□□□ -0.02
UBE2F-204ENST00000409953 CADPSQ9ULU8 1353 aa14.86□□□□□ -0.03
UBE2F-204ENST00000409953 CEP164Q9UPV0 1460 aa14.84□□□□□ -0.03
UBE2F-204ENST00000409953 FOXD1Q16676 465 aa14.82□□□□□ -0.04
UBE2F-204ENST00000409953 PEG3Q9GZU2 1588 aa14.75□□□□□ -0.05
UBE2F-204ENST00000409953 FANCD2Q9BXW9 1451 aa14.72□□□□□ -0.05
UBE2F-204ENST00000409953 RSF1Q96T23 1441 aaPredicted RBP14.72□□□□□ -0.05
UBE2F-204ENST00000409953 ZNF608Q9ULD9 1512 aaPredicted RBP14.68□□□□□ -0.06
UBE2F-204ENST00000409953 URB2Q14146 1524 aaKnown RBP14.67□□□□□ -0.06
UBE2F-204ENST00000409953 CHD1O14646 1710 aa14.62□□□□□ -0.07
UBE2F-204ENST00000409953 IFT140Q96RY7 1462 aa14.57□□□□□ -0.08
UBE2F-204ENST00000409953 EIF4G3O43432 1585 aaKnown RBP14.54□□□□□ -0.08
UBE2F-204ENST00000409953 KDM4FA0A1W2PPD8 638 aa14.53□□□□□ -0.08
UBE2F-204ENST00000409953 FBLN2P98095 1184 aa14.52□□□□□ -0.09
UBE2F-204ENST00000409953 MROH2BQ7Z745 1585 aa14.47□□□□□ -0.09
UBE2F-204ENST00000409953 CFTRP13569 1480 aa14.47□□□□□ -0.09
UBE2F-204ENST00000409953 CLASP1Q7Z460 1538 aa14.43□□□□□ -0.1
UBE2F-204ENST00000409953 ERCC6L2Q5T890 1561 aa14.43□□□□□ -0.1
UBE2F-204ENST00000409953 FBXO41Q8TF61 875 aa14.42□□□□□ -0.1
UBE2F-204ENST00000409953 LMTK3Q96Q04 1460 aa14.42□□□□□ -0.1
UBE2F-204ENST00000409953 AQRO60306 1485 aaKnown RBP eCLIP14.39□□□□□ -0.113e-6■■■□□ 18.3
UBE2F-204ENST00000409953 GAPVD1Q14C86 1478 aa14.38□□□□□ -0.11
UBE2F-204ENST00000409953 PPP6R1Q9UPN7 881 aa14.37□□□□□ -0.11
UBE2F-204ENST00000409953 HECW2Q9P2P5 1572 aa14.34□□□□□ -0.11
UBE2F-204ENST00000409953 ADRA2BP18089 450 aa14.33□□□□□ -0.12
UBE2F-204ENST00000409953 SYNJ1O43426 1573 aa14.32□□□□□ -0.12
UBE2F-204ENST00000409953 SOCS7O14512 581 aa14.32□□□□□ -0.12
UBE2F-204ENST00000409953 TOPBP1Q92547 1522 aa14.31□□□□□ -0.12
UBE2F-204ENST00000409953 KIF13AQ9H1H9 1805 aa14.31□□□□□ -0.12
UBE2F-204ENST00000409953 TARBP1Q13395 1621 aaKnown RBP14.26□□□□□ -0.13
UBE2F-204ENST00000409953 WIZO95785 1651 aa14.24□□□□□ -0.13
UBE2F-204ENST00000409953 SNAPC4Q5SXM2 1469 aa14.23□□□□□ -0.13
UBE2F-204ENST00000409953 ILDR2Q71H61 639 aa14.22□□□□□ -0.13
UBE2F-204ENST00000409953 CHMP7Q8WUX9 453 aaPredicted RBP14.22□□□□□ -0.13
UBE2F-204ENST00000409953 KDM6BO15054 1643 aa14.22□□□□□ -0.13
UBE2F-204ENST00000409953 PRDM2Q13029 1718 aa14.21□□□□□ -0.14
UBE2F-204ENST00000409953 ADGRL1O94910 1474 aa14.19□□□□□ -0.14
UBE2F-204ENST00000409953 SYNJ2O15056 1496 aa14.18□□□□□ -0.14
UBE2F-204ENST00000409953 ABCC8Q09428 1581 aa14.17□□□□□ -0.14
UBE2F-204ENST00000409953 DNMBPQ6XZF7 1577 aa14.16□□□□□ -0.14
UBE2F-204ENST00000409953 FAM69CQ0P6D2 419 aa14.14□□□□□ -0.15
UBE2F-204ENST00000409953 TDRD9Q8NDG6 1382 aaKnown RBP14.13□□□□□ -0.15
UBE2F-204ENST00000409953 MAGI1Q96QZ7 1491 aaPredicted RBP14.12□□□□□ -0.15
UBE2F-204ENST00000409953 POLA1P09884 1462 aaPredicted RBP14.11□□□□□ -0.15
UBE2F-204ENST00000409953 DISP3Q9P2K9 1392 aa14.1□□□□□ -0.15
UBE2F-204ENST00000409953 ABCC10Q5T3U5 1492 aa14.1□□□□□ -0.15
UBE2F-204ENST00000409953 RAD54L2Q9Y4B4 1467 aa14.07□□□□□ -0.16
UBE2F-204ENST00000409953 DIP2BQ9P265 1576 aa14.05□□□□□ -0.16
UBE2F-204ENST00000409953 WDR97A6NE52 1622 aa14.02□□□□□ -0.16
UBE2F-204ENST00000409953 GRIN2BQ13224 1484 aa14.01□□□□□ -0.17
UBE2F-204ENST00000409953 SOGA1O94964 1423 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms