RNA–Protein interactions for RNA: ENST00000272930.8

UBE2F-201, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2F, Length 2,009 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-201ENST00000272930 NISCHQ9Y2I1 1504 aa44.23■■■■■ 4.67
UBE2F-201ENST00000272930 CCDC180Q9P1Z9 1646 aa38.25■■■■□ 3.71
UBE2F-201ENST00000272930 ZCCHC6Q5VYS8 1495 aaKnown RBP37.31■■■■□ 3.56
UBE2F-201ENST00000272930 SHROOM4Q9ULL8 1493 aa36.6■■■■□ 3.45
UBE2F-201ENST00000272930 DCAF1Q9Y4B6 1507 aa36.56■■■■□ 3.44
UBE2F-201ENST00000272930 DCAF8L2P0C7V8 631 aa36.27■■■■□ 3.4
UBE2F-201ENST00000272930 MYO15BQ96JP2 1530 aa35.85■■■■□ 3.33
UBE2F-201ENST00000272930 ABCC9O60706 1549 aa35.54■■■■□ 3.28
UBE2F-201ENST00000272930 SUPT5HO00267 1087 aaKnown RBP35.54■■■■□ 3.28
UBE2F-201ENST00000272930 NACADO15069 1562 aa35.43■■■■□ 3.26
UBE2F-201ENST00000272930 SCRIBQ14160 1630 aa35.3■■■■□ 3.24
UBE2F-201ENST00000272930 RB1CC1Q8TDY2 1594 aa34.96■■■■□ 3.19
UBE2F-201ENST00000272930 RSF1Q96T23 1441 aaPredicted RBP34.6■■■■□ 3.13
UBE2F-201ENST00000272930 UNC13AQ9UPW8 1703 aa34.43■■■■□ 3.1
UBE2F-201ENST00000272930 CHIC1Q5VXU3 224 aa34.4■■■■□ 3.1
UBE2F-201ENST00000272930 CECR2Q9BXF3 1484 aa34.35■■■■□ 3.09
UBE2F-201ENST00000272930 MROH2BQ7Z745 1585 aa34.23■■■■□ 3.07
UBE2F-201ENST00000272930 BAZ1AQ9NRL2 1556 aaPredicted RBP34.09■■■■□ 3.05
UBE2F-201ENST00000272930 WIZO95785 1651 aa34.02■■■■□ 3.04
UBE2F-201ENST00000272930 BICRAQ9NZM4 1560 aa33.97■■■■□ 3.03
UBE2F-201ENST00000272930 SMARCA4P51532 1647 aa33.88■■■■□ 3.01
UBE2F-201ENST00000272930 PABPN1Q86U42 306 aaKnown RBP eCLIP33.65■■■□□ 2.98
UBE2F-201ENST00000272930 TOP2AP11388 1531 aaKnown RBP33.63■■■□□ 2.97
UBE2F-201ENST00000272930 PEG3Q9GZU2 1588 aa33.43■■■□□ 2.94
UBE2F-201ENST00000272930 EIF4G1Q04637 1599 aaKnown RBP33.42■■■□□ 2.94
UBE2F-201ENST00000272930 SMARCA2P51531 1590 aa33.37■■■□□ 2.93
UBE2F-201ENST00000272930 TRIM41Q8WV44 630 aa33.33■■■□□ 2.93
UBE2F-201ENST00000272930 CCDC88BA6NC98 1476 aa33.31■■■□□ 2.92
UBE2F-201ENST00000272930 LOC105371045A0A1W2PR82 267 aa33.13■■■□□ 2.89
UBE2F-201ENST00000272930 ATAD2BQ9ULI0 1458 aa33.12■■■□□ 2.89
UBE2F-201ENST00000272930 BAZ1BQ9UIG0 1483 aaKnown RBP32.96■■■□□ 2.87
UBE2F-201ENST00000272930 ABCC8Q09428 1581 aa32.88■■■□□ 2.85
UBE2F-201ENST00000272930 FAM9AQ8IZU1 332 aaPredicted RBP32.78■■■□□ 2.84
UBE2F-201ENST00000272930 HMGXB3Q12766 1538 aa32.73■■■□□ 2.83
UBE2F-201ENST00000272930 NCAPD3P42695 1498 aa32.7■■■□□ 2.83
UBE2F-201ENST00000272930 WRNQ14191 1432 aaPredicted RBP eCLIP32.52■■■□□ 2.8
UBE2F-201ENST00000272930 SYNJ1O43426 1573 aa32.42■■■□□ 2.78
UBE2F-201ENST00000272930 EEA1Q15075 1411 aa32.4■■■□□ 2.78
UBE2F-201ENST00000272930 SOGA1O94964 1423 aa32.38■■■□□ 2.77
UBE2F-201ENST00000272930 PCGF6Q9BYE7 350 aa32.34■■■□□ 2.77
UBE2F-201ENST00000272930 EHMT2Q96KQ7 1210 aa32.3■■■□□ 2.76
UBE2F-201ENST00000272930 RUSC2Q8N2Y8 1516 aa32.24■■■□□ 2.75
UBE2F-201ENST00000272930 TOP2BQ02880 1626 aa32.21■■■□□ 2.75
UBE2F-201ENST00000272930 CC2D2AQ9P2K1 1620 aa32.21■■■□□ 2.75
UBE2F-201ENST00000272930 CFTRP13569 1480 aa32.18■■■□□ 2.74
UBE2F-201ENST00000272930 BIVM-ERCC5R4GMW8 1640 aa32.18■■■□□ 2.74
UBE2F-201ENST00000272930 CSRNP3Q8WYN3 585 aa32.16■■■□□ 2.74
UBE2F-201ENST00000272930 PRDM2Q13029 1718 aa32.14■■■□□ 2.74
UBE2F-201ENST00000272930 TRIM26Q12899 539 aaPredicted RBP32.14■■■□□ 2.74
UBE2F-201ENST00000272930 TNIKQ9UKE5 1360 aa32.04■■■□□ 2.72
UBE2F-201ENST00000272930 GOLGA3Q08378 1498 aa32.01■■■□□ 2.71
UBE2F-201ENST00000272930 KIF21BO75037 1637 aa32■■■□□ 2.71
UBE2F-201ENST00000272930 HRCP23327 699 aa31.99■■■□□ 2.71
UBE2F-201ENST00000272930 CUX1P39880 1505 aa31.96■■■□□ 2.71
UBE2F-201ENST00000272930 CEP162Q5TB80 1403 aa31.94■■■□□ 2.7
UBE2F-201ENST00000272930 CEP164Q9UPV0 1460 aa31.94■■■□□ 2.7
UBE2F-201ENST00000272930 CADPSQ9ULU8 1353 aa31.91■■■□□ 2.7
UBE2F-201ENST00000272930 UBTFP17480 764 aaKnown RBP31.8■■■□□ 2.68
UBE2F-201ENST00000272930 RAPGEF2Q9Y4G8 1499 aa31.69■■■□□ 2.66
UBE2F-201ENST00000272930 ERICH3Q5RHP9 1530 aa31.64■■■□□ 2.66
UBE2F-201ENST00000272930 PRXQ9BXM0 1461 aa31.62■■■□□ 2.65
UBE2F-201ENST00000272930 KIF27Q86VH2 1401 aa31.62■■■□□ 2.65
UBE2F-201ENST00000272930 FANCD2Q9BXW9 1451 aa31.57■■■□□ 2.64
UBE2F-201ENST00000272930 CLIP1P30622 1438 aa31.52■■■□□ 2.64
UBE2F-201ENST00000272930 PPARGC1BQ86YN6 1023 aaKnown RBP31.51■■■□□ 2.63
UBE2F-201ENST00000272930 LAMC3Q9Y6N6 1575 aa31.48■■■□□ 2.63
UBE2F-201ENST00000272930 FGD5Q6ZNL6 1462 aa31.48■■■□□ 2.63
UBE2F-201ENST00000272930 NESP48681 1621 aa31.46■■■□□ 2.63
UBE2F-201ENST00000272930 DNMBPQ6XZF7 1577 aa31.43■■■□□ 2.62
UBE2F-201ENST00000272930 CUX2O14529 1486 aa31.39■■■□□ 2.62
UBE2F-201ENST00000272930 VPS8Q8N3P4 1428 aa31.36■■■□□ 2.61
UBE2F-201ENST00000272930 TOPBP1Q92547 1522 aa31.33■■■□□ 2.61
UBE2F-201ENST00000272930 IGF1RP08069 1367 aa31.28■■■□□ 2.6
UBE2F-201ENST00000272930 POLA1P09884 1462 aaPredicted RBP31.23■■■□□ 2.59
UBE2F-201ENST00000272930 ABCA10Q8WWZ4 1543 aa31.21■■■□□ 2.59
UBE2F-201ENST00000272930 DNAJC5BQ9UF47 199 aa31.2■■■□□ 2.59
UBE2F-201ENST00000272930 ZEB1P37275 1124 aaPredicted RBP31.19■■■□□ 2.58
UBE2F-201ENST00000272930 PDS5BQ9NTI5 1447 aa31.18■■■□□ 2.58
UBE2F-201ENST00000272930 URB2Q14146 1524 aaKnown RBP31.17■■■□□ 2.58
UBE2F-201ENST00000272930 ARAP1Q96P48 1450 aa31.16■■■□□ 2.58
UBE2F-201ENST00000272930 RAD54L2Q9Y4B4 1467 aa31.14■■■□□ 2.58
UBE2F-201ENST00000272930 CARMIL1Q5VZK9 1371 aa31.13■■■□□ 2.57
UBE2F-201ENST00000272930 KIF21AQ7Z4S6 1674 aa31.12■■■□□ 2.57
UBE2F-201ENST00000272930 WDR97A6NE52 1622 aa31.11■■■□□ 2.57
UBE2F-201ENST00000272930 TTBK1Q5TCY1 1321 aaPredicted RBP31.11■■■□□ 2.57
UBE2F-201ENST00000272930 RANGAP1P46060 587 aaPredicted RBP31.1■■■□□ 2.57
UBE2F-201ENST00000272930 ARHGAP35Q9NRY4 1499 aa31.02■■■□□ 2.56
UBE2F-201ENST00000272930 CUL7Q14999 1698 aa31■■■□□ 2.55
UBE2F-201ENST00000272930 APLP2Q06481 763 aa30.98■■■□□ 2.55
UBE2F-201ENST00000272930 ABCA5Q8WWZ7 1642 aa30.94■■■□□ 2.54
UBE2F-201ENST00000272930 TARBP1Q13395 1621 aaKnown RBP30.83■■■□□ 2.53
UBE2F-201ENST00000272930 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.81■■■□□ 2.52
UBE2F-201ENST00000272930 CTTNBP2Q8WZ74 1663 aa30.81■■■□□ 2.52
UBE2F-201ENST00000272930 GAPVD1Q14C86 1478 aa30.79■■■□□ 2.52
UBE2F-201ENST00000272930 MRC2Q9UBG0 1479 aa30.76■■■□□ 2.51
UBE2F-201ENST00000272930 TDRD9Q8NDG6 1382 aaKnown RBP30.75■■■□□ 2.51
UBE2F-201ENST00000272930 CCER1Q8TC90 406 aaPredicted RBP30.74■■■□□ 2.51
UBE2F-201ENST00000272930 EFCAB5A4FU69 1503 aa30.69■■■□□ 2.5
UBE2F-201ENST00000272930 MAP3K1Q13233 1512 aa30.68■■■□□ 2.5
UBE2F-201ENST00000272930 KANK4Q5T7N3 995 aaPredicted RBP30.68■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms