RNA–Protein interactions for RNA: ENST00000492857.1

ATXN1-208, Transcript of ataxin 1, humanhuman

TSL 4

Gene ATXN1, Length 647 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN1-208ENST00000492857 AEBP2Q6ZN18 517 aaPredicted RBP22.36■■□□□ 1.17
ATXN1-208ENST00000492857 CHIC1Q5VXU3 224 aa21.09■□□□□ 0.97
ATXN1-208ENST00000492857 SENP3Q9H4L4 574 aaPredicted RBP19.06■□□□□ 0.64
ATXN1-208ENST00000492857 PHF23Q9BUL5 403 aaPredicted RBP18.84■□□□□ 0.61
ATXN1-208ENST00000492857 FOXD1Q16676 465 aa17.82■□□□□ 0.44
ATXN1-208ENST00000492857 PLPPR3Q6T4P5 718 aa16.79■□□□□ 0.28
ATXN1-208ENST00000492857 MSH5O43196 834 aa16.7■□□□□ 0.26
ATXN1-208ENST00000492857 PIAS4Q8N2W9 510 aaPredicted RBP16.6■□□□□ 0.25
ATXN1-208ENST00000492857 PPP6R1Q9UPN7 881 aa16.57■□□□□ 0.24
ATXN1-208ENST00000492857 POTEDQ86YR6 584 aa16.55■□□□□ 0.24
ATXN1-208ENST00000492857 ADRA2BP18089 450 aa16.5■□□□□ 0.23
ATXN1-208ENST00000492857 MAPK8IP2Q13387 824 aaPredicted RBP15.22■□□□□ 0.03
ATXN1-208ENST00000492857 DMRT2Q9Y5R5 561 aa15.1■□□□□ 0.01
ATXN1-208ENST00000492857 SCAF1Q9H7N4 1312 aaKnown RBP15.1■□□□□ 0.01
ATXN1-208ENST00000492857 PPP4R3CPQ6ZMV5 832 aa14.71□□□□□ -0.05
ATXN1-208ENST00000492857 DCAF8L1A6NGE4 600 aa14.51□□□□□ -0.09
ATXN1-208ENST00000492857 HOXD11P31277 338 aaPredicted RBP14.51□□□□□ -0.09
ATXN1-208ENST00000492857 CNKSR2Q8WXI2 1034 aa14.46□□□□□ -0.09
ATXN1-208ENST00000492857 CACNB1Q02641 598 aaPredicted RBP14.44□□□□□ -0.1
ATXN1-208ENST00000492857 RNF216Q9NWF9 866 aaPredicted RBP14.36□□□□□ -0.11
ATXN1-208ENST00000492857 RNF39Q9H2S5 420 aa14.25□□□□□ -0.13
ATXN1-208ENST00000492857 NCBP3Q53F19 620 aaKnown RBP14.1□□□□□ -0.15
ATXN1-208ENST00000492857 C1QBPQ07021 282 aaKnown RBP14.03□□□□□ -0.16
ATXN1-208ENST00000492857 DNAJC5BQ9UF47 199 aa14.02□□□□□ -0.17
ATXN1-208ENST00000492857 NPM3O75607 178 aaKnown RBP13.9□□□□□ -0.18
ATXN1-208ENST00000492857 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.83□□□□□ -0.2
ATXN1-208ENST00000492857 U3KPZ7 1027 aaPredicted RBP13.52□□□□□ -0.25
ATXN1-208ENST00000492857 KCNA4P22459 653 aa13.51□□□□□ -0.25
ATXN1-208ENST00000492857 SPINK5Q9NQ38 1064 aaPredicted RBP13.37□□□□□ -0.27
ATXN1-208ENST00000492857 CAPN15O75808 1086 aa13.36□□□□□ -0.27
ATXN1-208ENST00000492857 SLC4A2P04920 1241 aa13.31□□□□□ -0.28
ATXN1-208ENST00000492857 DSG3P32926 999 aa13.3□□□□□ -0.28
ATXN1-208ENST00000492857 TRHP20396 242 aaPredicted RBP13.12□□□□□ -0.31
ATXN1-208ENST00000492857 APLP2Q06481 763 aa13.1□□□□□ -0.31
ATXN1-208ENST00000492857 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.07□□□□□ -0.32
ATXN1-208ENST00000492857 HNRNPUL2Q1KMD3 747 aaKnown RBP13.07□□□□□ -0.32
ATXN1-208ENST00000492857 ZNF219Q9P2Y4 722 aaPredicted RBP13.06□□□□□ -0.32
ATXN1-208ENST00000492857 ABCB7O75027 752 aa13.03□□□□□ -0.32
ATXN1-208ENST00000492857 SAMD1Q6SPF0 538 aaPredicted RBP12.99□□□□□ -0.33
ATXN1-208ENST00000492857 POTEHQ6S545 545 aa12.94□□□□□ -0.34
ATXN1-208ENST00000492857 MYCNP04198 464 aaPredicted RBP12.84□□□□□ -0.35
ATXN1-208ENST00000492857 POLA2Q14181 598 aa12.74□□□□□ -0.37
ATXN1-208ENST00000492857 SLC4A1APQ9BWU0 796 aaKnown RBP12.72□□□□□ -0.37
ATXN1-208ENST00000492857 RBM42Q9BTD8 480 aaKnown RBP12.67□□□□□ -0.38
ATXN1-208ENST00000492857 FOXD4L1Q9NU39 408 aa12.63□□□□□ -0.39
ATXN1-208ENST00000492857 ATF5Q9Y2D1 282 aaPredicted RBP12.59□□□□□ -0.39
ATXN1-208ENST00000492857 CHRDL2Q6WN34 429 aa12.47□□□□□ -0.41
ATXN1-208ENST00000492857 ZBTB12Q9Y330 459 aaPredicted RBP12.42□□□□□ -0.42
ATXN1-208ENST00000492857 ZBTB22O15209 634 aa12.41□□□□□ -0.42
ATXN1-208ENST00000492857 AKT1S1Q96B36 256 aa12.37□□□□□ -0.43
ATXN1-208ENST00000492857 OSCARQ8IYS5 282 aa12.3□□□□□ -0.44
ATXN1-208ENST00000492857 ATXN8OSP0DMR3 200 aa12.26□□□□□ -0.45
ATXN1-208ENST00000492857 REM2Q8IYK8 340 aaPredicted RBP12.26□□□□□ -0.45
ATXN1-208ENST00000492857 PIP4P2Q8N4L2 257 aa12.14□□□□□ -0.47
ATXN1-208ENST00000492857 PITPNM1O00562 1244 aa12.12□□□□□ -0.47
ATXN1-208ENST00000492857 FBLN2P98095 1184 aa12.08□□□□□ -0.48
ATXN1-208ENST00000492857 SP7Q8TDD2 431 aaPredicted RBP12.06□□□□□ -0.48
ATXN1-208ENST00000492857 FXR2P51116 673 aaKnown RBP eCLIP12.05□□□□□ -0.48
ATXN1-208ENST00000492857 SPDYE2BA6NHP3 402 aa12.03□□□□□ -0.48
ATXN1-208ENST00000492857 SPDYE6P0CI01 402 aa12.03□□□□□ -0.48
ATXN1-208ENST00000492857 SPDYE2Q495Y8 402 aa12.03□□□□□ -0.48
ATXN1-208ENST00000492857 MKRN4PQ13434 485 aaPredicted RBP11.99□□□□□ -0.49
ATXN1-208ENST00000492857 HAX1O00165 279 aa11.98□□□□□ -0.49
ATXN1-208ENST00000492857 ZNF692Q9BU19 519 aaPredicted RBP11.91□□□□□ -0.5
ATXN1-208ENST00000492857 CLEC11AQ9Y240 323 aa11.89□□□□□ -0.51
ATXN1-208ENST00000492857 SPDYE1Q8NFV5 336 aaPredicted RBP11.87□□□□□ -0.51
ATXN1-208ENST00000492857 SSUH2Q9Y2M2 353 aa11.86□□□□□ -0.51
ATXN1-208ENST00000492857 EVX2Q03828 476 aa11.84□□□□□ -0.51
ATXN1-208ENST00000492857 PRKAR2AP13861 404 aaKnown RBP11.82□□□□□ -0.52
ATXN1-208ENST00000492857 CSRNP3Q8WYN3 585 aa11.74□□□□□ -0.53
ATXN1-208ENST00000492857 PABPN1Q86U42 306 aaKnown RBP eCLIP11.71□□□□□ -0.53
ATXN1-208ENST00000492857 C19orf67A6NJJ6 358 aa11.67□□□□□ -0.54
ATXN1-208ENST00000492857 CHADLQ6NUI6 762 aa11.67□□□□□ -0.54
ATXN1-208ENST00000492857 PRR29P0C7W0 189 aa11.66□□□□□ -0.54
ATXN1-208ENST00000492857 GABBR2O75899 941 aa11.55□□□□□ -0.56
ATXN1-208ENST00000492857 EHMT2Q96KQ7 1210 aa11.5□□□□□ -0.57
ATXN1-208ENST00000492857 FARP1Q9Y4F1 1045 aaPredicted RBP11.48□□□□□ -0.57
ATXN1-208ENST00000492857 CD44P16070 742 aaKnown RBP11.43□□□□□ -0.58
ATXN1-208ENST00000492857 STAG3Q9UJ98 1225 aa11.36□□□□□ -0.59
ATXN1-208ENST00000492857 SPDYE4A6NLX3 237 aa11.35□□□□□ -0.59
ATXN1-208ENST00000492857 CREBZFQ9NS37 354 aa11.34□□□□□ -0.59
ATXN1-208ENST00000492857 LHX8Q68G74 356 aa11.33□□□□□ -0.6
ATXN1-208ENST00000492857 POTEIP0CG38 1075 aa11.31□□□□□ -0.6
ATXN1-208ENST00000492857 CLCN6P51797 869 aa11.3□□□□□ -0.6
ATXN1-208ENST00000492857 ZRANB1Q9UGI0 708 aa11.26□□□□□ -0.61
ATXN1-208ENST00000492857 ZNF579Q8NAF0 562 aaKnown RBP11.23□□□□□ -0.61
ATXN1-208ENST00000492857 DCBLD2Q96PD2 775 aa11.2□□□□□ -0.62
ATXN1-208ENST00000492857 GALR2O43603 387 aaPredicted RBP11.12□□□□□ -0.63
ATXN1-208ENST00000492857 PAK3O75914 559 aaPredicted RBP11.12□□□□□ -0.63
ATXN1-208ENST00000492857 NPM1P06748 294 aaKnown RBP eCLIP11.12□□□□□ -0.63
ATXN1-208ENST00000492857 MNX1P50219 401 aaPredicted RBP11.12□□□□□ -0.63
ATXN1-208ENST00000492857 PHF12Q96QT6 1004 aa11.08□□□□□ -0.64
ATXN1-208ENST00000492857 PROM2Q8N271 834 aa11.04□□□□□ -0.64
ATXN1-208ENST00000492857 POTEB2H3BUK9 544 aa10.94□□□□□ -0.66
ATXN1-208ENST00000492857 PELP1Q8IZL8 1130 aaKnown RBP10.94□□□□□ -0.66
ATXN1-208ENST00000492857 MS4A3Q96HJ5 214 aa10.92□□□□□ -0.66
ATXN1-208ENST00000492857 TSPYL2Q9H2G4 693 aaPredicted RBP10.92□□□□□ -0.66
ATXN1-208ENST00000492857 OTUD5Q96G74 571 aa10.91□□□□□ -0.66
ATXN1-208ENST00000492857 ASTLQ6HA08 431 aaPredicted RBP10.88□□□□□ -0.67
ATXN1-208ENST00000492857 MIER1Q8N108 512 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms