RNA–Protein interactions for RNA: ENST00000515399.5

CTBP1-217, Transcript of C-terminal binding protein 1, humanhuman

TSL 3

Gene CTBP1, Length 985 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTBP1-217ENST00000515399 NISCHQ9Y2I1 1504 aa47.54■■■■■ 5.2
CTBP1-217ENST00000515399 CCDC180Q9P1Z9 1646 aa42.16■■■■■ 4.34
CTBP1-217ENST00000515399 ABCC9O60706 1549 aa41.47■■■■■ 4.23
CTBP1-217ENST00000515399 DCAF8L2P0C7V8 631 aa39.98■■■■□ 3.99
CTBP1-217ENST00000515399 RB1CC1Q8TDY2 1594 aa39.79■■■■□ 3.96
CTBP1-217ENST00000515399 NACADO15069 1562 aa39.73■■■■□ 3.95
CTBP1-217ENST00000515399 ZCCHC6Q5VYS8 1495 aaKnown RBP39.56■■■■□ 3.92
CTBP1-217ENST00000515399 MYO15BQ96JP2 1530 aa39.45■■■■□ 3.91
CTBP1-217ENST00000515399 DCAF1Q9Y4B6 1507 aa39.28■■■■□ 3.88
CTBP1-217ENST00000515399 PABPN1Q86U42 306 aaKnown RBP eCLIP38.84■■■■□ 3.812e-8■■□□□ 12.2
CTBP1-217ENST00000515399 UNC13AQ9UPW8 1703 aa38.75■■■■□ 3.79
CTBP1-217ENST00000515399 SCRIBQ14160 1630 aa38.58■■■■□ 3.77
CTBP1-217ENST00000515399 BICRAQ9NZM4 1560 aa38.55■■■■□ 3.76
CTBP1-217ENST00000515399 DNAJC5BQ9UF47 199 aa38.14■■■■□ 3.7
CTBP1-217ENST00000515399 SHROOM4Q9ULL8 1493 aa38.13■■■■□ 3.69
CTBP1-217ENST00000515399 EIF4G1Q04637 1599 aaKnown RBP37.57■■■■□ 3.6
CTBP1-217ENST00000515399 CC2D2AQ9P2K1 1620 aa37.43■■■■□ 3.58
CTBP1-217ENST00000515399 CECR2Q9BXF3 1484 aa37.26■■■■□ 3.55
CTBP1-217ENST00000515399 SMARCA4P51532 1647 aa36.85■■■■□ 3.49
CTBP1-217ENST00000515399 BAZ1AQ9NRL2 1556 aaPredicted RBP36.84■■■■□ 3.49
CTBP1-217ENST00000515399 ATAD2BQ9ULI0 1458 aa36.72■■■■□ 3.47
CTBP1-217ENST00000515399 NCAPD3P42695 1498 aa36.7■■■■□ 3.47
CTBP1-217ENST00000515399 SMARCA2P51531 1590 aa36.65■■■■□ 3.46
CTBP1-217ENST00000515399 MROH2BQ7Z745 1585 aa36.65■■■■□ 3.46
CTBP1-217ENST00000515399 PEG3Q9GZU2 1588 aa36.46■■■■□ 3.43
CTBP1-217ENST00000515399 HMGXB3Q12766 1538 aa36.45■■■■□ 3.43
CTBP1-217ENST00000515399 BAZ1BQ9UIG0 1483 aaKnown RBP36.43■■■■□ 3.42
CTBP1-217ENST00000515399 RSF1Q96T23 1441 aaPredicted RBP36.25■■■■□ 3.39
CTBP1-217ENST00000515399 WIZO95785 1651 aa36.22■■■■□ 3.39
CTBP1-217ENST00000515399 NESP48681 1621 aa35.85■■■■□ 3.33
CTBP1-217ENST00000515399 TOP2AP11388 1531 aaKnown RBP35.83■■■■□ 3.33
CTBP1-217ENST00000515399 ERCC6Q03468 1493 aa35.77■■■■□ 3.32
CTBP1-217ENST00000515399 LAMC3Q9Y6N6 1575 aa35.69■■■■□ 3.3
CTBP1-217ENST00000515399 CADPSQ9ULU8 1353 aa35.68■■■■□ 3.3
CTBP1-217ENST00000515399 PDS5BQ9NTI5 1447 aa35.55■■■■□ 3.28
CTBP1-217ENST00000515399 SUPT5HO00267 1087 aaKnown RBP35.48■■■■□ 3.27
CTBP1-217ENST00000515399 CCDC88BA6NC98 1476 aa35.48■■■■□ 3.27
CTBP1-217ENST00000515399 CFTRP13569 1480 aa35.41■■■■□ 3.26
CTBP1-217ENST00000515399 CUX2O14529 1486 aa35.32■■■■□ 3.24
CTBP1-217ENST00000515399 KIF21AQ7Z4S6 1674 aa35.32■■■■□ 3.24
CTBP1-217ENST00000515399 FANCD2Q9BXW9 1451 aa35.25■■■■□ 3.23
CTBP1-217ENST00000515399 THOC2Q8NI27 1593 aaKnown RBP35.21■■■■□ 3.23
CTBP1-217ENST00000515399 CEP164Q9UPV0 1460 aa35.19■■■■□ 3.22
CTBP1-217ENST00000515399 MRC2Q9UBG0 1479 aa35.14■■■■□ 3.22
CTBP1-217ENST00000515399 WDR62O43379 1518 aa34.97■■■■□ 3.19
CTBP1-217ENST00000515399 PRDM2Q13029 1718 aa34.96■■■■□ 3.19
CTBP1-217ENST00000515399 URB2Q14146 1524 aaKnown RBP34.86■■■■□ 3.17
CTBP1-217ENST00000515399 ABCC8Q09428 1581 aa34.66■■■■□ 3.14
CTBP1-217ENST00000515399 TOPBP1Q92547 1522 aa34.65■■■■□ 3.14
CTBP1-217ENST00000515399 DNMBPQ6XZF7 1577 aa34.57■■■■□ 3.13
CTBP1-217ENST00000515399 IFT140Q96RY7 1462 aa34.46■■■■□ 3.11
CTBP1-217ENST00000515399 DNAJC5Q9H3Z4 198 aa34.38■■■■□ 3.09
CTBP1-217ENST00000515399 CUX1P39880 1505 aa34.37■■■■□ 3.09
CTBP1-217ENST00000515399 POLA1P09884 1462 aaPredicted RBP34.36■■■■□ 3.09
CTBP1-217ENST00000515399 ZNF608Q9ULD9 1512 aaPredicted RBP34.31■■■■□ 3.08
CTBP1-217ENST00000515399 SOGA1O94964 1423 aa34.3■■■■□ 3.08
CTBP1-217ENST00000515399 FGD5Q6ZNL6 1462 aa34.28■■■■□ 3.08
CTBP1-217ENST00000515399 RAD54L2Q9Y4B4 1467 aa34.27■■■■□ 3.08
CTBP1-217ENST00000515399 TARBP1Q13395 1621 aaKnown RBP34.22■■■■□ 3.07
CTBP1-217ENST00000515399 WRNQ14191 1432 aaPredicted RBP eCLIP34.2■■■■□ 3.064e-8■■■■■ 27.9
CTBP1-217ENST00000515399 AQRO60306 1485 aaKnown RBP eCLIP34.16■■■■□ 3.067e-7■■□□□ 14.1
CTBP1-217ENST00000515399 TDRD9Q8NDG6 1382 aaKnown RBP34.12■■■■□ 3.05
CTBP1-217ENST00000515399 EIF4G3O43432 1585 aaKnown RBP34.1■■■■□ 3.05
CTBP1-217ENST00000515399 SYNJ1O43426 1573 aa34.04■■■■□ 3.04
CTBP1-217ENST00000515399 TOP2BQ02880 1626 aa34.04■■■■□ 3.04
CTBP1-217ENST00000515399 OSCARQ8IYS5 282 aa33.99■■■■□ 3.03
CTBP1-217ENST00000515399 BIVM-ERCC5R4GMW8 1640 aa33.99■■■■□ 3.03
CTBP1-217ENST00000515399 ABCA10Q8WWZ4 1543 aa33.93■■■■□ 3.02
CTBP1-217ENST00000515399 WDR97A6NE52 1622 aa33.92■■■■□ 3.02
CTBP1-217ENST00000515399 FBLN2P98095 1184 aa33.87■■■■□ 3.01
CTBP1-217ENST00000515399 GAPVD1Q14C86 1478 aa33.86■■■■□ 3.01
CTBP1-217ENST00000515399 GRIN2BQ13224 1484 aa33.85■■■■□ 3.01
CTBP1-217ENST00000515399 SNAPC4Q5SXM2 1469 aa33.8■■■■□ 3
CTBP1-217ENST00000515399 CHMP7Q8WUX9 453 aaPredicted RBP33.74■■■□□ 2.99
CTBP1-217ENST00000515399 MAGI1Q96QZ7 1491 aaPredicted RBP33.74■■■□□ 2.99
CTBP1-217ENST00000515399 ABCA5Q8WWZ7 1642 aa33.73■■■□□ 2.99
CTBP1-217ENST00000515399 PBRM1Q86U86 1689 aa33.65■■■□□ 2.98
CTBP1-217ENST00000515399 CHD1O14646 1710 aa33.65■■■□□ 2.98
CTBP1-217ENST00000515399 SYNJ2O15056 1496 aa33.63■■■□□ 2.97
CTBP1-217ENST00000515399 ERICH3Q5RHP9 1530 aa33.51■■■□□ 2.95
CTBP1-217ENST00000515399 KIF27Q86VH2 1401 aa33.51■■■□□ 2.95
CTBP1-217ENST00000515399 TRIM41Q8WV44 630 aa33.49■■■□□ 2.95
CTBP1-217ENST00000515399 FHAD1B1AJZ9 1412 aa33.47■■■□□ 2.95
CTBP1-217ENST00000515399 ADAMTS12P58397 1594 aa33.43■■■□□ 2.94
CTBP1-217ENST00000515399 GRIN2AQ12879 1464 aa33.39■■■□□ 2.94
CTBP1-217ENST00000515399 IGF1RP08069 1367 aa33.38■■■□□ 2.93
CTBP1-217ENST00000515399 ARHGEF11O15085 1522 aa33.31■■■□□ 2.92
CTBP1-217ENST00000515399 CLASP1Q7Z460 1538 aa33.31■■■□□ 2.92
CTBP1-217ENST00000515399 RIMBP3CA6NJZ7 1639 aa33.28■■■□□ 2.92
CTBP1-217ENST00000515399 RIMBP3BA6NNM3 1639 aa33.28■■■□□ 2.92
CTBP1-217ENST00000515399 RIMBP3Q9UFD9 1639 aa33.28■■■□□ 2.92
CTBP1-217ENST00000515399 NUP160Q12769 1436 aa33.23■■■□□ 2.91
CTBP1-217ENST00000515399 CARMIL1Q5VZK9 1371 aa33.2■■■□□ 2.9
CTBP1-217ENST00000515399 CEP170Q5SW79 1584 aa33.19■■■□□ 2.9
CTBP1-217ENST00000515399 RUSC2Q8N2Y8 1516 aa33.18■■■□□ 2.9
CTBP1-217ENST00000515399 CYB5RLQ6IPT4 315 aa33.16■■■□□ 2.9
CTBP1-217ENST00000515399 CUL7Q14999 1698 aa33.16■■■□□ 2.9
CTBP1-217ENST00000515399 ARAP1Q96P48 1450 aa33.05■■■□□ 2.88
CTBP1-217ENST00000515399 CHIC1Q5VXU3 224 aa33.03■■■□□ 2.88
CTBP1-217ENST00000515399 JPH4Q96JJ6 628 aa33.02■■■□□ 2.88
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms