RNA–Protein interactions for RNA: ENST00000585849.1

TMC6-204, Transcript of transmembrane channel like 6, humanhuman

TSL 2

Gene TMC6, Length 552 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC6-204ENST00000585849 NISCHQ9Y2I1 1504 aa47.68■■■■■ 5.22
TMC6-204ENST00000585849 CCDC180Q9P1Z9 1646 aa42.81■■■■■ 4.44
TMC6-204ENST00000585849 ABCC9O60706 1549 aa42.51■■■■■ 4.4
TMC6-204ENST00000585849 RB1CC1Q8TDY2 1594 aa40.62■■■■■ 4.09
TMC6-204ENST00000585849 NACADO15069 1562 aa40.38■■■■■ 4.05
TMC6-204ENST00000585849 DCAF8L2P0C7V8 631 aa40.16■■■■■ 4.02
TMC6-204ENST00000585849 MYO15BQ96JP2 1530 aa39.86■■■■□ 3.97
TMC6-204ENST00000585849 UNC13AQ9UPW8 1703 aa39.75■■■■□ 3.95
TMC6-204ENST00000585849 DNAJC5BQ9UF47 199 aa39.62■■■■□ 3.93
TMC6-204ENST00000585849 PABPN1Q86U42 306 aaKnown RBP eCLIP39.57■■■■□ 3.93
TMC6-204ENST00000585849 ZCCHC6Q5VYS8 1495 aaKnown RBP39.56■■■■□ 3.92
TMC6-204ENST00000585849 DCAF1Q9Y4B6 1507 aa39.42■■■■□ 3.9
TMC6-204ENST00000585849 BICRAQ9NZM4 1560 aa39.38■■■■□ 3.89
TMC6-204ENST00000585849 SCRIBQ14160 1630 aa38.96■■■■□ 3.83
TMC6-204ENST00000585849 SHROOM4Q9ULL8 1493 aa38.92■■■■□ 3.82
TMC6-204ENST00000585849 CC2D2AQ9P2K1 1620 aa38.45■■■■□ 3.75
TMC6-204ENST00000585849 EIF4G1Q04637 1599 aaKnown RBP38.4■■■■□ 3.74
TMC6-204ENST00000585849 CECR2Q9BXF3 1484 aa38.28■■■■□ 3.72
TMC6-204ENST00000585849 NCAPD3P42695 1498 aa37.22■■■■□ 3.55
TMC6-204ENST00000585849 SMARCA4P51532 1647 aa37.2■■■■□ 3.55
TMC6-204ENST00000585849 ATAD2BQ9ULI0 1458 aa37.13■■■■□ 3.53
TMC6-204ENST00000585849 SMARCA2P51531 1590 aa37.1■■■■□ 3.53
TMC6-204ENST00000585849 BAZ1AQ9NRL2 1556 aaPredicted RBP37.04■■■■□ 3.52
TMC6-204ENST00000585849 HMGXB3Q12766 1538 aa37■■■■□ 3.51
TMC6-204ENST00000585849 BAZ1BQ9UIG0 1483 aaKnown RBP36.82■■■■□ 3.49
TMC6-204ENST00000585849 PEG3Q9GZU2 1588 aa36.82■■■■□ 3.48
TMC6-204ENST00000585849 ERCC6Q03468 1493 aa36.74■■■■□ 3.47
TMC6-204ENST00000585849 MROH2BQ7Z745 1585 aa36.73■■■■□ 3.47
TMC6-204ENST00000585849 CUX2O14529 1486 aa36.6■■■■□ 3.45
TMC6-204ENST00000585849 NESP48681 1621 aa36.56■■■■□ 3.44
TMC6-204ENST00000585849 LAMC3Q9Y6N6 1575 aa36.41■■■■□ 3.42
TMC6-204ENST00000585849 WIZO95785 1651 aa36.35■■■■□ 3.41
TMC6-204ENST00000585849 DNAJC5Q9H3Z4 198 aa36.31■■■■□ 3.4
TMC6-204ENST00000585849 THOC2Q8NI27 1593 aaKnown RBP36.2■■■■□ 3.39
TMC6-204ENST00000585849 KIF21AQ7Z4S6 1674 aa36.19■■■■□ 3.38
TMC6-204ENST00000585849 PDS5BQ9NTI5 1447 aa36.17■■■■□ 3.38
TMC6-204ENST00000585849 CADPSQ9ULU8 1353 aa36.09■■■■□ 3.37
TMC6-204ENST00000585849 RSF1Q96T23 1441 aaPredicted RBP36.02■■■■□ 3.36
TMC6-204ENST00000585849 TOP2AP11388 1531 aaKnown RBP35.89■■■■□ 3.34
TMC6-204ENST00000585849 MRC2Q9UBG0 1479 aa35.84■■■■□ 3.33
TMC6-204ENST00000585849 CEP164Q9UPV0 1460 aa35.75■■■■□ 3.31
TMC6-204ENST00000585849 WDR62O43379 1518 aa35.74■■■■□ 3.31
TMC6-204ENST00000585849 CFTRP13569 1480 aa35.73■■■■□ 3.31
TMC6-204ENST00000585849 FANCD2Q9BXW9 1451 aa35.7■■■■□ 3.31
TMC6-204ENST00000585849 PRDM2Q13029 1718 aa35.55■■■■□ 3.28
TMC6-204ENST00000585849 CCDC88BA6NC98 1476 aa35.45■■■■□ 3.27
TMC6-204ENST00000585849 URB2Q14146 1524 aaKnown RBP35.38■■■■□ 3.25
TMC6-204ENST00000585849 TOPBP1Q92547 1522 aa35.06■■■■□ 3.2
TMC6-204ENST00000585849 ABCC8Q09428 1581 aa35.04■■■■□ 3.2
TMC6-204ENST00000585849 IFT140Q96RY7 1462 aa35.02■■■■□ 3.2
TMC6-204ENST00000585849 DNMBPQ6XZF7 1577 aa34.97■■■■□ 3.19
TMC6-204ENST00000585849 OSCARQ8IYS5 282 aa34.94■■■■□ 3.18
TMC6-204ENST00000585849 ZNF608Q9ULD9 1512 aaPredicted RBP34.9■■■■□ 3.18
TMC6-204ENST00000585849 TRIM41Q8WV44 630 aa34.81■■■■□ 3.16
TMC6-204ENST00000585849 EIF4G3O43432 1585 aaKnown RBP34.79■■■■□ 3.16
TMC6-204ENST00000585849 TARBP1Q13395 1621 aaKnown RBP34.74■■■■□ 3.15
TMC6-204ENST00000585849 POLA1P09884 1462 aaPredicted RBP34.7■■■■□ 3.15
TMC6-204ENST00000585849 AQRO60306 1485 aaKnown RBP eCLIP34.61■■■■□ 3.138e-10■■■■■ 47.1
TMC6-204ENST00000585849 SUPT5HO00267 1087 aaKnown RBP34.59■■■■□ 3.13
TMC6-204ENST00000585849 SOGA1O94964 1423 aa34.55■■■■□ 3.12
TMC6-204ENST00000585849 RAD54L2Q9Y4B4 1467 aa34.54■■■■□ 3.12
TMC6-204ENST00000585849 CHD1O14646 1710 aa34.54■■■■□ 3.12
TMC6-204ENST00000585849 FGD5Q6ZNL6 1462 aa34.52■■■■□ 3.12
TMC6-204ENST00000585849 CUX1P39880 1505 aa34.5■■■■□ 3.11
TMC6-204ENST00000585849 RIMBP3CA6NJZ7 1639 aa34.5■■■■□ 3.11
TMC6-204ENST00000585849 RIMBP3BA6NNM3 1639 aa34.5■■■■□ 3.11
TMC6-204ENST00000585849 RIMBP3Q9UFD9 1639 aa34.5■■■■□ 3.11
TMC6-204ENST00000585849 WDR97A6NE52 1622 aa34.45■■■■□ 3.11
TMC6-204ENST00000585849 TDRD9Q8NDG6 1382 aaKnown RBP34.43■■■■□ 3.1
TMC6-204ENST00000585849 FBLN2P98095 1184 aa34.38■■■■□ 3.09
TMC6-204ENST00000585849 ARHGEF11O15085 1522 aa34.38■■■■□ 3.09
TMC6-204ENST00000585849 SNAPC4Q5SXM2 1469 aa34.29■■■■□ 3.08
TMC6-204ENST00000585849 GRIN2BQ13224 1484 aa34.24■■■■□ 3.07
TMC6-204ENST00000585849 MAGI1Q96QZ7 1491 aaPredicted RBP34.24■■■■□ 3.07
TMC6-204ENST00000585849 PBRM1Q86U86 1689 aa34.2■■■■□ 3.07
TMC6-204ENST00000585849 CHMP7Q8WUX9 453 aaPredicted RBP34.16■■■■□ 3.06
TMC6-204ENST00000585849 GAPVD1Q14C86 1478 aa34.14■■■■□ 3.06
TMC6-204ENST00000585849 ABCA10Q8WWZ4 1543 aa34.14■■■■□ 3.06
TMC6-204ENST00000585849 SYNJ1O43426 1573 aa34.12■■■■□ 3.05
TMC6-204ENST00000585849 SYNJ2O15056 1496 aa34.11■■■■□ 3.05
TMC6-204ENST00000585849 ABCA5Q8WWZ7 1642 aa34.1■■■■□ 3.05
TMC6-204ENST00000585849 CYB5RLQ6IPT4 315 aa34.09■■■■□ 3.05
TMC6-204ENST00000585849 BIVM-ERCC5R4GMW8 1640 aa34.08■■■■□ 3.05
TMC6-204ENST00000585849 CLASP1Q7Z460 1538 aa34.07■■■■□ 3.04
TMC6-204ENST00000585849 TOP2BQ02880 1626 aa34.05■■■■□ 3.04
TMC6-204ENST00000585849 WRNQ14191 1432 aaPredicted RBP eCLIP34.04■■■■□ 3.04
TMC6-204ENST00000585849 ARAP1Q96P48 1450 aa34.04■■■■□ 3.04
TMC6-204ENST00000585849 ADAMTS12P58397 1594 aa33.82■■■■□ 3
TMC6-204ENST00000585849 GRIN2AQ12879 1464 aa33.8■■■■□ 3
TMC6-204ENST00000585849 ERICH3Q5RHP9 1530 aa33.74■■■□□ 2.99
TMC6-204ENST00000585849 FHAD1B1AJZ9 1412 aa33.71■■■□□ 2.99
TMC6-204ENST00000585849 TRHP20396 242 aaPredicted RBP33.68■■■□□ 2.98
TMC6-204ENST00000585849 CEP170Q5SW79 1584 aa33.67■■■□□ 2.98
TMC6-204ENST00000585849 NUP160Q12769 1436 aa33.65■■■□□ 2.98
TMC6-204ENST00000585849 SHROOM2Q13796 1616 aa33.53■■■□□ 2.96
TMC6-204ENST00000585849 ERCC6L2Q5T890 1561 aa33.53■■■□□ 2.96
TMC6-204ENST00000585849 KIF27Q86VH2 1401 aa33.37■■■□□ 2.93
TMC6-204ENST00000585849 RUSC2Q8N2Y8 1516 aa33.34■■■□□ 2.93
TMC6-204ENST00000585849 CUL7Q14999 1698 aa33.34■■■□□ 2.93
TMC6-204ENST00000585849 PRG4Q92954 1404 aaPredicted RBP33.33■■■□□ 2.93
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms