RNA–Protein interactions for RNA: ENST00000342645.7

HIPK2-201, Transcript of homeodomain interacting protein kinase 2, humanhuman

TSL 5 BASIC

Gene HIPK2, Length 2,937 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK2-201ENST00000342645 NISCHQ9Y2I1 1504 aa17.7■□□□□ 0.42
HIPK2-201ENST00000342645 SHROOM4Q9ULL8 1493 aa15.49■□□□□ 0.07
HIPK2-201ENST00000342645 SUPT5HO00267 1087 aaKnown RBP15.37■□□□□ 0.05
HIPK2-201ENST00000342645 CCDC180Q9P1Z9 1646 aa15.34■□□□□ 0.05
HIPK2-201ENST00000342645 HRCP23327 699 aa15.17■□□□□ 0.02
HIPK2-201ENST00000342645 MYO15BQ96JP2 1530 aa15.05■□□□□ 0
HIPK2-201ENST00000342645 CHIC1Q5VXU3 224 aa15.04■□□□□ -0
HIPK2-201ENST00000342645 ZCCHC6Q5VYS8 1495 aaKnown RBP15.01□□□□□ -0.01
HIPK2-201ENST00000342645 PCGF6Q9BYE7 350 aa14.99□□□□□ -0.01
HIPK2-201ENST00000342645 PPARGC1BQ86YN6 1023 aaKnown RBP14.86□□□□□ -0.03
HIPK2-201ENST00000342645 DCAF8L2P0C7V8 631 aa14.78□□□□□ -0.04
HIPK2-201ENST00000342645 DCAF1Q9Y4B6 1507 aa14.71□□□□□ -0.06
HIPK2-201ENST00000342645 LOC105371045A0A1W2PR82 267 aa14.67□□□□□ -0.06
HIPK2-201ENST00000342645 TRIM26Q12899 539 aaPredicted RBP14.57□□□□□ -0.08
HIPK2-201ENST00000342645 ZEB1P37275 1124 aaPredicted RBP14.39□□□□□ -0.11
HIPK2-201ENST00000342645 PELP1Q8IZL8 1130 aaKnown RBP14.31□□□□□ -0.12
HIPK2-201ENST00000342645 TRIM41Q8WV44 630 aa14.25□□□□□ -0.13
HIPK2-201ENST00000342645 ABCC9O60706 1549 aa14.23□□□□□ -0.13
HIPK2-201ENST00000342645 SCAF1Q9H7N4 1312 aaKnown RBP14.22□□□□□ -0.13
HIPK2-201ENST00000342645 FAM9AQ8IZU1 332 aaPredicted RBP14.21□□□□□ -0.13
HIPK2-201ENST00000342645 NACADO15069 1562 aa14.2□□□□□ -0.14
HIPK2-201ENST00000342645 RSF1Q96T23 1441 aaPredicted RBP14.16□□□□□ -0.14
HIPK2-201ENST00000342645 EHMT2Q96KQ7 1210 aa14.14□□□□□ -0.15
HIPK2-201ENST00000342645 RB1CC1Q8TDY2 1594 aa14.07□□□□□ -0.16
HIPK2-201ENST00000342645 SCRIBQ14160 1630 aa14.07□□□□□ -0.16
HIPK2-201ENST00000342645 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.96□□□□□ -0.17
HIPK2-201ENST00000342645 ACIN1Q9UKV3 1341 aaKnown RBP13.96□□□□□ -0.18
HIPK2-201ENST00000342645 CCER1Q8TC90 406 aaPredicted RBP13.95□□□□□ -0.18
HIPK2-201ENST00000342645 NEUROD1Q13562 356 aa13.92□□□□□ -0.18
HIPK2-201ENST00000342645 DIEXFQ68CQ4 756 aaKnown RBP13.85□□□□□ -0.19
HIPK2-201ENST00000342645 CECR2Q9BXF3 1484 aa13.84□□□□□ -0.19
HIPK2-201ENST00000342645 CENPBP07199 599 aaPredicted RBP13.84□□□□□ -0.19
HIPK2-201ENST00000342645 GTF3C3Q9Y5Q9 886 aa13.83□□□□□ -0.2
HIPK2-201ENST00000342645 MROH2BQ7Z745 1585 aa13.8□□□□□ -0.2
HIPK2-201ENST00000342645 UNC13AQ9UPW8 1703 aa13.77□□□□□ -0.21
HIPK2-201ENST00000342645 WIZO95785 1651 aa13.76□□□□□ -0.21
HIPK2-201ENST00000342645 TTBK1Q5TCY1 1321 aaPredicted RBP13.76□□□□□ -0.21
HIPK2-201ENST00000342645 MYT1Q01538 1121 aa13.69□□□□□ -0.22
HIPK2-201ENST00000342645 WRNQ14191 1432 aaPredicted RBP eCLIP13.66□□□□□ -0.225e-6■■■■■ 46
HIPK2-201ENST00000342645 BAZ1AQ9NRL2 1556 aaPredicted RBP13.65□□□□□ -0.22
HIPK2-201ENST00000342645 EIF4G1Q04637 1599 aaKnown RBP13.65□□□□□ -0.23
HIPK2-201ENST00000342645 ZNF316A6NFI3 1004 aaPredicted RBP13.64□□□□□ -0.23
HIPK2-201ENST00000342645 CEP162Q5TB80 1403 aa13.63□□□□□ -0.23
HIPK2-201ENST00000342645 YTHDC1Q96MU7 727 aaKnown RBP13.6□□□□□ -0.23
HIPK2-201ENST00000342645 BICRAQ9NZM4 1560 aa13.6□□□□□ -0.23
HIPK2-201ENST00000342645 ABCC8Q09428 1581 aa13.6□□□□□ -0.23
HIPK2-201ENST00000342645 CCDC88BA6NC98 1476 aa13.6□□□□□ -0.23
HIPK2-201ENST00000342645 TNIKQ9UKE5 1360 aa13.57□□□□□ -0.24
HIPK2-201ENST00000342645 UBTFP17480 764 aaKnown RBP13.55□□□□□ -0.24
HIPK2-201ENST00000342645 SOGA1O94964 1423 aa13.55□□□□□ -0.24
HIPK2-201ENST00000342645 MIER1Q8N108 512 aa13.51□□□□□ -0.25
HIPK2-201ENST00000342645 CSRNP3Q8WYN3 585 aa13.51□□□□□ -0.25
HIPK2-201ENST00000342645 TOP2AP11388 1531 aaKnown RBP13.5□□□□□ -0.25
HIPK2-201ENST00000342645 HNRNPUL2Q1KMD3 747 aaKnown RBP13.47□□□□□ -0.25
HIPK2-201ENST00000342645 EEA1Q15075 1411 aa13.47□□□□□ -0.25
HIPK2-201ENST00000342645 RUSC2Q8N2Y8 1516 aa13.47□□□□□ -0.25
HIPK2-201ENST00000342645 SMARCA2P51531 1590 aa13.45□□□□□ -0.26
HIPK2-201ENST00000342645 SMARCA4P51532 1647 aa13.44□□□□□ -0.26
HIPK2-201ENST00000342645 GOLGA3Q08378 1498 aa13.43□□□□□ -0.26
HIPK2-201ENST00000342645 PEG3Q9GZU2 1588 aa13.39□□□□□ -0.27
HIPK2-201ENST00000342645 APLP2Q06481 763 aa13.33□□□□□ -0.28
HIPK2-201ENST00000342645 CLIP1P30622 1438 aa13.31□□□□□ -0.28
HIPK2-201ENST00000342645 CEP164Q9UPV0 1460 aa13.31□□□□□ -0.28
HIPK2-201ENST00000342645 VPS8Q8N3P4 1428 aa13.28□□□□□ -0.28
HIPK2-201ENST00000342645 KIF21BO75037 1637 aa13.26□□□□□ -0.29
HIPK2-201ENST00000342645 RANGAP1P46060 587 aaPredicted RBP13.26□□□□□ -0.29
HIPK2-201ENST00000342645 PABPN1Q86U42 306 aaKnown RBP eCLIP13.23□□□□□ -0.29
HIPK2-201ENST00000342645 SYNJ1O43426 1573 aa13.22□□□□□ -0.29
HIPK2-201ENST00000342645 CLSPNQ9HAW4 1339 aa13.21□□□□□ -0.29
HIPK2-201ENST00000342645 SUPT16HQ9Y5B9 1047 aaKnown RBP13.21□□□□□ -0.29
HIPK2-201ENST00000342645 BAZ1BQ9UIG0 1483 aaKnown RBP13.19□□□□□ -0.3
HIPK2-201ENST00000342645 RAPGEF2Q9Y4G8 1499 aa13.18□□□□□ -0.3
HIPK2-201ENST00000342645 DHX57Q6P158 1386 aaKnown RBP13.17□□□□□ -0.3
HIPK2-201ENST00000342645 ATAD2BQ9ULI0 1458 aa13.17□□□□□ -0.3
HIPK2-201ENST00000342645 HMGXB3Q12766 1538 aa13.12□□□□□ -0.31
HIPK2-201ENST00000342645 TSHZ2Q9NRE2 1034 aa13.1□□□□□ -0.31
HIPK2-201ENST00000342645 NCAPD3P42695 1498 aa13.09□□□□□ -0.31
HIPK2-201ENST00000342645 KANK4Q5T7N3 995 aaPredicted RBP13.07□□□□□ -0.32
HIPK2-201ENST00000342645 ARAP1Q96P48 1450 aa13.03□□□□□ -0.32
HIPK2-201ENST00000342645 ANP32EQ9BTT0 268 aa13.02□□□□□ -0.32
HIPK2-201ENST00000342645 KCNH8Q96L42 1107 aa13.01□□□□□ -0.33
HIPK2-201ENST00000342645 ITGAEP38570 1179 aa13□□□□□ -0.33
HIPK2-201ENST00000342645 RRBP1Q9P2E9 1410 aaKnown RBP13□□□□□ -0.33
HIPK2-201ENST00000342645 TOP2BQ02880 1626 aa13□□□□□ -0.33
HIPK2-201ENST00000342645 ERICH3Q5RHP9 1530 aa12.99□□□□□ -0.33
HIPK2-201ENST00000342645 BCANQ96GW7 911 aa12.98□□□□□ -0.33
HIPK2-201ENST00000342645 PRXQ9BXM0 1461 aa12.97□□□□□ -0.33
HIPK2-201ENST00000342645 CCNB3Q8WWL7 1395 aa12.96□□□□□ -0.33
HIPK2-201ENST00000342645 CUX2O14529 1486 aa12.96□□□□□ -0.34
HIPK2-201ENST00000342645 FKBP8Q14318 412 aa12.94□□□□□ -0.34
HIPK2-201ENST00000342645 BIVM-ERCC5R4GMW8 1640 aa12.92□□□□□ -0.34
HIPK2-201ENST00000342645 DDX10Q13206 875 aaKnown RBP12.91□□□□□ -0.34
HIPK2-201ENST00000342645 RAB3GAP2Q9H2M9 1393 aa12.91□□□□□ -0.34
HIPK2-201ENST00000342645 CC2D2AQ9P2K1 1620 aa12.89□□□□□ -0.35
HIPK2-201ENST00000342645 MAPKBP1O60336 1514 aa12.88□□□□□ -0.35
HIPK2-201ENST00000342645 ARHGAP35Q9NRY4 1499 aa12.86□□□□□ -0.35
HIPK2-201ENST00000342645 NEFLP07196 543 aa12.86□□□□□ -0.35
HIPK2-201ENST00000342645 KIF27Q86VH2 1401 aa12.86□□□□□ -0.35
HIPK2-201ENST00000342645 PRDM2Q13029 1718 aa12.86□□□□□ -0.35
HIPK2-201ENST00000342645 SIN3AQ96ST3 1273 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms