Protein–RNA interactions for Protein: Q9H0D6

XRN2, 5'-3' exoribonuclease 2, humanhuman

Known RBP eCLIP

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2Q9H0D6 BDH1-213ENST00000477015 595 ntTSL 212.64□□□□□ -0.397e-7■■■■□ 26.7
XRN2Q9H0D6 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC18.65■□□□□ 0.584e-11■■■■□ 26.7
XRN2Q9H0D6 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.094e-11■■■■□ 26.7
XRN2Q9H0D6 CTTN-201ENST00000301843 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.314e-11■■■■□ 26.7
XRN2Q9H0D6 FAAP20-210ENST00000440825 855 ntTSL 332.9■■■□□ 2.863e-6■■■■□ 26.6
XRN2Q9H0D6 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC31.72■■■□□ 2.673e-6■■■■□ 26.6
XRN2Q9H0D6 FAAP20-207ENST00000420515 1544 ntTSL 1 (best)30.93■■■□□ 2.543e-6■■■■□ 26.6
XRN2Q9H0D6 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.483e-6■■■■□ 26.6
XRN2Q9H0D6 FAAP20-201ENST00000378543 569 ntTSL 228.13■■■□□ 2.093e-6■■■■□ 26.6
XRN2Q9H0D6 FAAP20-203ENST00000400918 811 ntTSL 226.34■■□□□ 1.813e-6■■■■□ 26.6
XRN2Q9H0D6 FAAP20-206ENST00000414253 2216 ntTSL 224.46■■□□□ 1.513e-6■■■■□ 26.6
XRN2Q9H0D6 FAAP20-209ENST00000428120 2313 ntTSL 1 (best)24.02■■□□□ 1.443e-6■■■■□ 26.6
XRN2Q9H0D6 FAAP20-205ENST00000401813 2543 ntTSL 1 (best)18.44■□□□□ 0.543e-6■■■■□ 26.6
XRN2Q9H0D6 FAAP20-211ENST00000469733 2280 ntTSL 217.54■□□□□ 0.43e-6■■■■□ 26.6
XRN2Q9H0D6 FAAP20-213ENST00000487186 3576 ntTSL 213.13□□□□□ -0.313e-6■■■■□ 26.6
XRN2Q9H0D6 FARP1-202ENST00000376581 1021 ntTSL 2 BASIC10.55□□□□□ -0.722e-6■■■■□ 26.6
XRN2Q9H0D6 ARIH1-206ENST00000564062 612 ntTSL 337.25■■■■□ 3.551e-6■■■■□ 26.6
XRN2Q9H0D6 CIZ1-209ENST00000420484 684 ntTSL 335.46■■■■□ 3.271e-6■■■■□ 26.6
XRN2Q9H0D6 ARIH1-210ENST00000570085 807 ntTSL 334.4■■■■□ 3.11e-6■■■■□ 26.6
XRN2Q9H0D6 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC32.62■■■□□ 2.811e-6■■■■□ 26.6
XRN2Q9H0D6 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC31.82■■■□□ 2.683e-12■■■■□ 26.6
XRN2Q9H0D6 SEMA4B-206ENST00000558895 533 ntTSL 428.79■■■□□ 2.23e-12■■■■□ 26.6
XRN2Q9H0D6 RNF11-203ENST00000494873 953 ntTSL 327.62■■■□□ 2.011e-6■■■■□ 26.6
XRN2Q9H0D6 SEMA4B-218ENST00000561085 582 ntTSL 426.69■■□□□ 1.863e-12■■■■□ 26.6
XRN2Q9H0D6 SEMA4B-212ENST00000559792 585 ntTSL 426.31■■□□□ 1.83e-12■■■■□ 26.6
XRN2Q9H0D6 CIZ1-211ENST00000467178 904 ntTSL 326.08■■□□□ 1.771e-6■■■■□ 26.6
XRN2Q9H0D6 SKP1-206ENST00000519321 692 ntTSL 326.06■■□□□ 1.763e-12■■■■□ 26.6
XRN2Q9H0D6 CD151-210ENST00000526661 894 ntTSL 225.78■■□□□ 1.721e-6■■■■□ 26.6
XRN2Q9H0D6 PSRC1-208ENST00000429031 835 ntTSL 325.25■■□□□ 1.631e-6■■■■□ 26.6
XRN2Q9H0D6 ACTR1B-203ENST00000460427 730 ntTSL 224.46■■□□□ 1.511e-6■■■■□ 26.6
XRN2Q9H0D6 SEMA4B-211ENST00000559322 559 ntTSL 424.27■■□□□ 1.483e-12■■■■□ 26.6
XRN2Q9H0D6 ACSL3-209ENST00000535678 560 ntTSL 324.18■■□□□ 1.468e-10■■■■□ 26.6
XRN2Q9H0D6 CIZ1-221ENST00000488559 952 ntTSL 523.97■■□□□ 1.431e-6■■■■□ 26.6
XRN2Q9H0D6 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC23.93■■□□□ 1.421e-6■■■■□ 26.6
XRN2Q9H0D6 CD151-206ENST00000525333 561 ntTSL 423.43■■□□□ 1.341e-6■■■■□ 26.6
XRN2Q9H0D6 AGAP3-219ENST00000485904 683 ntTSL 323.27■■□□□ 1.321e-6■■■■□ 26.6
XRN2Q9H0D6 PSRC1-210ENST00000471740 738 ntTSL 323.12■■□□□ 1.291e-6■■■■□ 26.6
XRN2Q9H0D6 CD151-216ENST00000530155 493 ntTSL 422.94■■□□□ 1.261e-6■■■■□ 26.6
XRN2Q9H0D6 CD151-211ENST00000526693 771 ntTSL 322.89■■□□□ 1.251e-6■■■■□ 26.6
XRN2Q9H0D6 PAN3-204ENST00000503791 2443 ntTSL 222.51■■□□□ 1.191e-6■■■■□ 26.6
XRN2Q9H0D6 PSRC1-209ENST00000459765 839 ntTSL 222.47■■□□□ 1.191e-6■■■■□ 26.6
XRN2Q9H0D6 RAD23B-203ENST00000419616 716 ntTSL 322.46■■□□□ 1.191e-6■■■■□ 26.6
XRN2Q9H0D6 CD151-204ENST00000524748 793 ntTSL 522.3■■□□□ 1.161e-6■■■■□ 26.6
XRN2Q9H0D6 CD151-212ENST00000527341 797 ntTSL 322.3■■□□□ 1.161e-6■■■■□ 26.6
XRN2Q9H0D6 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC22.28■■□□□ 1.165e-6■■■■□ 26.6
XRN2Q9H0D6 CALM1-215ENST00000557123 569 ntTSL 321.62■■□□□ 1.051e-6■■■■□ 26.6
XRN2Q9H0D6 CALM1-210ENST00000555132 554 ntTSL 421.62■■□□□ 1.051e-6■■■■□ 26.6
XRN2Q9H0D6 CALM1-213ENST00000556757 588 ntTSL 221.62■■□□□ 1.051e-6■■■■□ 26.6
XRN2Q9H0D6 CALM1-205ENST00000553542 877 ntTSL 5 BASIC21.62■■□□□ 1.051e-6■■■■□ 26.6
XRN2Q9H0D6 CALM1-208ENST00000553995 583 ntTSL 221.62■■□□□ 1.051e-6■■■■□ 26.6
XRN2Q9H0D6 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.041e-6■■■■□ 26.6
XRN2Q9H0D6 KMT5C-211ENST00000592631 869 ntTSL 321.42■■□□□ 1.021e-6■■■■□ 26.6
XRN2Q9H0D6 CD151-207ENST00000525718 565 ntTSL 221.37■■□□□ 1.011e-6■■■■□ 26.6
XRN2Q9H0D6 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC21.27■□□□□ 0.991e-6■■■■□ 26.6
XRN2Q9H0D6 SEMA4B-210ENST00000559300 541 ntTSL 421.07■□□□□ 0.963e-12■■■■□ 26.6
XRN2Q9H0D6 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.931e-6■■■■□ 26.6
XRN2Q9H0D6 CD151-215ENST00000529810 608 ntTSL 320.67■□□□□ 0.91e-6■■■■□ 26.6
XRN2Q9H0D6 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.891e-6■■■■□ 26.6
XRN2Q9H0D6 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.871e-6■■■■□ 26.6
XRN2Q9H0D6 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.761e-6■■■■□ 26.6
XRN2Q9H0D6 CALM1-206ENST00000553630 1420 ntTSL 519.8■□□□□ 0.761e-6■■■■□ 26.6
XRN2Q9H0D6 AC110285.2-202ENST00000608155 414 ntTSL 519.76■□□□□ 0.751e-6■■■■□ 26.6
XRN2Q9H0D6 SEMA4B-203ENST00000558051 552 ntTSL 419.71■□□□□ 0.753e-12■■■■□ 26.6
XRN2Q9H0D6 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.742e-6■■■■□ 26.6
XRN2Q9H0D6 CXXC1-205ENST00000586502 541 ntTSL 319.66■□□□□ 0.741e-6■■■■□ 26.6
XRN2Q9H0D6 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC19.52■□□□□ 0.721e-6■■■■□ 26.6
XRN2Q9H0D6 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.721e-6■■■■□ 26.6
XRN2Q9H0D6 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.71e-6■■■■□ 26.6
XRN2Q9H0D6 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC19.35■□□□□ 0.691e-6■■■■□ 26.6
XRN2Q9H0D6 CD151-219ENST00000531999 580 ntTSL 319.31■□□□□ 0.681e-6■■■■□ 26.6
XRN2Q9H0D6 CXXC1-209ENST00000587342 802 ntTSL 219.23■□□□□ 0.671e-6■■■■□ 26.6
XRN2Q9H0D6 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC19.04■□□□□ 0.641e-6■■■■□ 26.6
XRN2Q9H0D6 CALM1-207ENST00000553964 2670 ntTSL 1 (best)18.98■□□□□ 0.631e-6■■■■□ 26.6
XRN2Q9H0D6 B2M-210ENST00000560681 572 ntTSL 418.94■□□□□ 0.621e-6■■■■□ 26.6
XRN2Q9H0D6 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.85■□□□□ 0.611e-6■■■■□ 26.6
XRN2Q9H0D6 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.61e-6■■■■□ 26.6
XRN2Q9H0D6 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.591e-6■■■■□ 26.6
XRN2Q9H0D6 KMT5C-204ENST00000460956 637 ntTSL 518.62■□□□□ 0.571e-6■■■■□ 26.6
XRN2Q9H0D6 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.572e-6■■■■□ 26.6
XRN2Q9H0D6 PSRC1-207ENST00000418914 1040 ntTSL 1 (best)18.57■□□□□ 0.561e-6■■■■□ 26.6
XRN2Q9H0D6 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC18.4■□□□□ 0.541e-6■■■■□ 26.6
XRN2Q9H0D6 KMT5C-203ENST00000445196 2077 ntTSL 518.29■□□□□ 0.521e-6■■■■□ 26.6
XRN2Q9H0D6 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC18.22■□□□□ 0.511e-6■■■■□ 26.6
XRN2Q9H0D6 SEMA4B-215ENST00000560089 2804 ntTSL 1 (best)18.14■□□□□ 0.53e-12■■■■□ 26.6
XRN2Q9H0D6 CXXC1-206ENST00000586568 866 ntTSL 217.98■□□□□ 0.471e-6■■■■□ 26.6
XRN2Q9H0D6 CXXC1-203ENST00000586144 474 ntTSL 217.76■□□□□ 0.431e-6■■■■□ 26.6
XRN2Q9H0D6 CXXC1-208ENST00000587170 476 ntTSL 217.54■□□□□ 0.41e-6■■■■□ 26.6
XRN2Q9H0D6 CD151-208ENST00000525868 541 ntTSL 417.48■□□□□ 0.391e-6■■■■□ 26.6
XRN2Q9H0D6 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.46■□□□□ 0.391e-6■■■■□ 26.6
XRN2Q9H0D6 B2M-207ENST00000559907 499 ntTSL 316.69■□□□□ 0.261e-6■■■■□ 26.6
XRN2Q9H0D6 MDM2-219ENST00000493419 577 ntTSL 216.52■□□□□ 0.241e-6■■■■□ 26.6
XRN2Q9H0D6 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.231e-6■■■■□ 26.6
XRN2Q9H0D6 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.188e-10■■■■□ 26.6
XRN2Q9H0D6 CXXC1-214ENST00000590901 2562 ntTSL 215.77■□□□□ 0.121e-6■■■■□ 26.6
XRN2Q9H0D6 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.113e-12■■■■□ 26.6
XRN2Q9H0D6 CD151-218ENST00000530726 1407 ntTSL 515.68■□□□□ 0.11e-6■■■■□ 26.6
XRN2Q9H0D6 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.11e-6■■■■□ 26.6
XRN2Q9H0D6 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.038e-10■■■■□ 26.6
XRN2Q9H0D6 CBX1-206ENST00000581003 812 ntTSL 314.93□□□□□ -0.022e-6■■■■□ 26.6
XRN2Q9H0D6 CALM1-214ENST00000557020 557 ntTSL 414.79□□□□□ -0.041e-6■■■■□ 26.6
Retrieved 100 of 21,068 protein–RNA pairs in 113.8 ms