RNA–Protein interactions for RNA: ENST00000493419.1

MDM2-219, Transcript of MDM2 proto-oncogene, humanhuman

TSL 2

Gene MDM2, Length 577 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-219ENST00000493419 NISCHQ9Y2I1 1504 aa34.55■■■■□ 3.12
MDM2-219ENST00000493419 CCDC180Q9P1Z9 1646 aa30.67■■■□□ 2.5
MDM2-219ENST00000493419 ABCC9O60706 1549 aa29.97■■■□□ 2.39
MDM2-219ENST00000493419 NACADO15069 1562 aa28.84■■■□□ 2.21
MDM2-219ENST00000493419 RB1CC1Q8TDY2 1594 aa28.84■■■□□ 2.21
MDM2-219ENST00000493419 ZCCHC6Q5VYS8 1495 aaKnown RBP28.81■■■□□ 2.2
MDM2-219ENST00000493419 MYO15BQ96JP2 1530 aa28.74■■■□□ 2.19
MDM2-219ENST00000493419 DCAF8L2P0C7V8 631 aa28.72■■■□□ 2.19
MDM2-219ENST00000493419 DCAF1Q9Y4B6 1507 aa28.62■■■□□ 2.17
MDM2-219ENST00000493419 UNC13AQ9UPW8 1703 aa28.15■■■□□ 2.1
MDM2-219ENST00000493419 BICRAQ9NZM4 1560 aa28.03■■■□□ 2.08
MDM2-219ENST00000493419 PABPN1Q86U42 306 aaKnown RBP eCLIP28.01■■■□□ 2.07
MDM2-219ENST00000493419 SCRIBQ14160 1630 aa27.97■■■□□ 2.07
MDM2-219ENST00000493419 SHROOM4Q9ULL8 1493 aa27.75■■■□□ 2.03
MDM2-219ENST00000493419 DNAJC5BQ9UF47 199 aa27.54■■■□□ 2
MDM2-219ENST00000493419 EIF4G1Q04637 1599 aaKnown RBP27.26■■□□□ 1.95
MDM2-219ENST00000493419 CC2D2AQ9P2K1 1620 aa27.12■■□□□ 1.93
MDM2-219ENST00000493419 CECR2Q9BXF3 1484 aa26.94■■□□□ 1.9
MDM2-219ENST00000493419 SMARCA4P51532 1647 aa26.78■■□□□ 1.88
MDM2-219ENST00000493419 BAZ1AQ9NRL2 1556 aaPredicted RBP26.75■■□□□ 1.87
MDM2-219ENST00000493419 ATAD2BQ9ULI0 1458 aa26.66■■□□□ 1.86
MDM2-219ENST00000493419 NCAPD3P42695 1498 aa26.65■■□□□ 1.86
MDM2-219ENST00000493419 MROH2BQ7Z745 1585 aa26.63■■□□□ 1.85
MDM2-219ENST00000493419 SMARCA2P51531 1590 aa26.59■■□□□ 1.85
MDM2-219ENST00000493419 PEG3Q9GZU2 1588 aa26.57■■□□□ 1.84
MDM2-219ENST00000493419 HMGXB3Q12766 1538 aa26.5■■□□□ 1.83
MDM2-219ENST00000493419 BAZ1BQ9UIG0 1483 aaKnown RBP26.4■■□□□ 1.82
MDM2-219ENST00000493419 RSF1Q96T23 1441 aaPredicted RBP26.35■■□□□ 1.81
MDM2-219ENST00000493419 WIZO95785 1651 aa26.3■■□□□ 1.8
MDM2-219ENST00000493419 TOP2AP11388 1531 aaKnown RBP26.06■■□□□ 1.76
MDM2-219ENST00000493419 NESP48681 1621 aa25.97■■□□□ 1.75
MDM2-219ENST00000493419 LAMC3Q9Y6N6 1575 aa25.89■■□□□ 1.73
MDM2-219ENST00000493419 CADPSQ9ULU8 1353 aa25.85■■□□□ 1.73
MDM2-219ENST00000493419 ERCC6Q03468 1493 aa25.8■■□□□ 1.72
MDM2-219ENST00000493419 CCDC88BA6NC98 1476 aa25.75■■□□□ 1.71
MDM2-219ENST00000493419 CFTRP13569 1480 aa25.72■■□□□ 1.71
MDM2-219ENST00000493419 PDS5BQ9NTI5 1447 aa25.72■■□□□ 1.71
MDM2-219ENST00000493419 KIF21AQ7Z4S6 1674 aa25.61■■□□□ 1.69
MDM2-219ENST00000493419 SUPT5HO00267 1087 aaKnown RBP25.6■■□□□ 1.69
MDM2-219ENST00000493419 THOC2Q8NI27 1593 aaKnown RBP25.58■■□□□ 1.69
MDM2-219ENST00000493419 CUX2O14529 1486 aa25.57■■□□□ 1.68
MDM2-219ENST00000493419 FANCD2Q9BXW9 1451 aa25.54■■□□□ 1.68
MDM2-219ENST00000493419 CEP164Q9UPV0 1460 aa25.49■■□□□ 1.67
MDM2-219ENST00000493419 MRC2Q9UBG0 1479 aa25.47■■□□□ 1.67
MDM2-219ENST00000493419 PRDM2Q13029 1718 aa25.43■■□□□ 1.66
MDM2-219ENST00000493419 WDR62O43379 1518 aa25.4■■□□□ 1.66
MDM2-219ENST00000493419 URB2Q14146 1524 aaKnown RBP25.31■■□□□ 1.64
MDM2-219ENST00000493419 TOPBP1Q92547 1522 aa25.15■■□□□ 1.62
MDM2-219ENST00000493419 ABCC8Q09428 1581 aa25.12■■□□□ 1.61
MDM2-219ENST00000493419 DNMBPQ6XZF7 1577 aa25.11■■□□□ 1.61
MDM2-219ENST00000493419 CUX1P39880 1505 aa24.98■■□□□ 1.59
MDM2-219ENST00000493419 IFT140Q96RY7 1462 aa24.97■■□□□ 1.59
MDM2-219ENST00000493419 POLA1P09884 1462 aaPredicted RBP24.95■■□□□ 1.58
MDM2-219ENST00000493419 ZNF608Q9ULD9 1512 aaPredicted RBP24.87■■□□□ 1.57
MDM2-219ENST00000493419 TARBP1Q13395 1621 aaKnown RBP24.87■■□□□ 1.57
MDM2-219ENST00000493419 FGD5Q6ZNL6 1462 aa24.87■■□□□ 1.57
MDM2-219ENST00000493419 RAD54L2Q9Y4B4 1467 aa24.82■■□□□ 1.56
MDM2-219ENST00000493419 SOGA1O94964 1423 aa24.81■■□□□ 1.56
MDM2-219ENST00000493419 WRNQ14191 1432 aaPredicted RBP eCLIP24.81■■□□□ 1.56
MDM2-219ENST00000493419 SYNJ1O43426 1573 aa24.76■■□□□ 1.55
MDM2-219ENST00000493419 EIF4G3O43432 1585 aaKnown RBP24.76■■□□□ 1.55
MDM2-219ENST00000493419 TOP2BQ02880 1626 aa24.75■■□□□ 1.55
MDM2-219ENST00000493419 DNAJC5Q9H3Z4 198 aa24.75■■□□□ 1.55
MDM2-219ENST00000493419 BIVM-ERCC5R4GMW8 1640 aa24.74■■□□□ 1.55
MDM2-219ENST00000493419 AQRO60306 1485 aaKnown RBP eCLIP24.72■■□□□ 1.551e-6■■■■□ 23
MDM2-219ENST00000493419 TDRD9Q8NDG6 1382 aaKnown RBP24.67■■□□□ 1.54
MDM2-219ENST00000493419 WDR97A6NE52 1622 aa24.67■■□□□ 1.54
MDM2-219ENST00000493419 ABCA10Q8WWZ4 1543 aa24.66■■□□□ 1.54
MDM2-219ENST00000493419 ABCA5Q8WWZ7 1642 aa24.54■■□□□ 1.52
MDM2-219ENST00000493419 GRIN2BQ13224 1484 aa24.53■■□□□ 1.52
MDM2-219ENST00000493419 GAPVD1Q14C86 1478 aa24.53■■□□□ 1.52
MDM2-219ENST00000493419 SNAPC4Q5SXM2 1469 aa24.5■■□□□ 1.51
MDM2-219ENST00000493419 OSCARQ8IYS5 282 aa24.48■■□□□ 1.51
MDM2-219ENST00000493419 MAGI1Q96QZ7 1491 aaPredicted RBP24.47■■□□□ 1.51
MDM2-219ENST00000493419 PBRM1Q86U86 1689 aa24.43■■□□□ 1.5
MDM2-219ENST00000493419 CHD1O14646 1710 aa24.38■■□□□ 1.49
MDM2-219ENST00000493419 SYNJ2O15056 1496 aa24.38■■□□□ 1.49
MDM2-219ENST00000493419 ERICH3Q5RHP9 1530 aa24.35■■□□□ 1.49
MDM2-219ENST00000493419 FBLN2P98095 1184 aa24.34■■□□□ 1.49
MDM2-219ENST00000493419 CHMP7Q8WUX9 453 aaPredicted RBP24.31■■□□□ 1.48
MDM2-219ENST00000493419 ADAMTS12P58397 1594 aa24.3■■□□□ 1.48
MDM2-219ENST00000493419 KIF27Q86VH2 1401 aa24.27■■□□□ 1.48
MDM2-219ENST00000493419 FHAD1B1AJZ9 1412 aa24.27■■□□□ 1.48
MDM2-219ENST00000493419 GRIN2AQ12879 1464 aa24.22■■□□□ 1.47
MDM2-219ENST00000493419 IGF1RP08069 1367 aa24.21■■□□□ 1.47
MDM2-219ENST00000493419 CLASP1Q7Z460 1538 aa24.2■■□□□ 1.47
MDM2-219ENST00000493419 TRIM41Q8WV44 630 aa24.19■■□□□ 1.46
MDM2-219ENST00000493419 NUP160Q12769 1436 aa24.14■■□□□ 1.45
MDM2-219ENST00000493419 ARHGEF11O15085 1522 aa24.12■■□□□ 1.45
MDM2-219ENST00000493419 CEP170Q5SW79 1584 aa24.1■■□□□ 1.45
MDM2-219ENST00000493419 RIMBP3CA6NJZ7 1639 aa24.1■■□□□ 1.45
MDM2-219ENST00000493419 RIMBP3BA6NNM3 1639 aa24.1■■□□□ 1.45
MDM2-219ENST00000493419 RIMBP3Q9UFD9 1639 aa24.1■■□□□ 1.45
MDM2-219ENST00000493419 CUL7Q14999 1698 aa24.09■■□□□ 1.45
MDM2-219ENST00000493419 RUSC2Q8N2Y8 1516 aa24.09■■□□□ 1.45
MDM2-219ENST00000493419 CARMIL1Q5VZK9 1371 aa24.03■■□□□ 1.44
MDM2-219ENST00000493419 CHIC1Q5VXU3 224 aa23.97■■□□□ 1.43
MDM2-219ENST00000493419 ARAP1Q96P48 1450 aa23.95■■□□□ 1.42
MDM2-219ENST00000493419 SHROOM2Q13796 1616 aa23.94■■□□□ 1.42
MDM2-219ENST00000493419 RAPGEF2Q9Y4G8 1499 aa23.9■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 274 ms